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CSPI02G02930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G02930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTMV resistance protein N-like
Genome locationChr2:1992866..1993408
RNA-Seq ExpressionCSPI02G02930
SyntenyCSPI02G02930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063691.1 TMV resistance protein N-like isoform X2 [Cucumis melo var. makuwa]1.5e-1947.24Show/hide
Query:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVILID------------------------YLSWKKKAFIAPC
        T+ CKLLEEIP IPEGVVRM+AGGC+SLARFPDNI  FISC DN V      H L   +IL++                         +SWK+KA   PC
Subjt:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVILID------------------------YLSWKKKAFIAPC

Query:  VKFQVTTIDHERVQIECRVSFINDIEV
         KF+VT  +  R  ++C+V FIN I+V
Subjt:  VKFQVTTIDHERVQIECRVSFINDIEV

KAE8651666.1 hypothetical protein Csa_021160 [Cucumis sativus]6.9e-2549.29Show/hide
Query:  KIPEGVVRMNA-----TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL-------------SHDLISHVILID
        K+P  ++   +      +ECK LEEI K+P+GVVRM+  GC+SLARFP+NI DFISCDDN        V++  +L              +D ++   L D
Subjt:  KIPEGVVRMNA-----TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL-------------SHDLISHVILID

Query:  YLSWKKKAFIAPCVKFQVTTIDHERVQIECRVSFINDIEV
        YLSWK+KAFIA CVKF VT  DHE V++ CRV FINDIEV
Subjt:  YLSWKKKAFIAPCVKFQVTTIDHERVQIECRVSFINDIEV

XP_011649005.1 TMV resistance protein N isoform X1 [Cucumis sativus]5.8e-2457.6Show/hide
Query:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL---------SHDLISHVI-----LIDYLSWKKKAFIAPCVK
        TMECKLLEEIPK+P+GVV MNA GCISL RFPDNI DFI CDDN        V++  +L         S+  +++ +     LIDYLSWK+KAFI PCVK
Subjt:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL---------SHDLISHVI-----LIDYLSWKKKAFIAPCVK

Query:  FQVTTIDHERVQIECRVSFINDIEV
        FQV +ID + V+ +CRV FINDIEV
Subjt:  FQVTTIDHERVQIECRVSFINDIEV

XP_016901487.1 PREDICTED: TMV resistance protein N-like [Cucumis melo]1.5e-1949.61Show/hide
Query:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVIL------------------------IDYLSWKKKAFIAPC
        T +CKLLEEIPKIPEG V MNA GC+SLARFPDNI DFISC      +    H +  +++L                        IDYLSWK+KAFIAPC
Subjt:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVIL------------------------IDYLSWKKKAFIAPC

Query:  VKFQVTTIDHERVQIECRVSFINDIEV
        VK QVT        +  RV FIND EV
Subjt:  VKFQVTTIDHERVQIECRVSFINDIEV

XP_031736691.1 disease resistance-like protein DSC1 [Cucumis sativus]6.9e-2549.29Show/hide
Query:  KIPEGVVRMNA-----TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL-------------SHDLISHVILID
        K+P  ++   +      +ECK LEEI K+P+GVVRM+  GC+SLARFP+NI DFISCDDN        V++  +L              +D ++   L D
Subjt:  KIPEGVVRMNA-----TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL-------------SHDLISHVILID

Query:  YLSWKKKAFIAPCVKFQVTTIDHERVQIECRVSFINDIEV
        YLSWK+KAFIA CVKF VT  DHE V++ CRV FINDIEV
Subjt:  YLSWKKKAFIAPCVKFQVTTIDHERVQIECRVSFINDIEV

TrEMBL top hitse value%identityAlignment
A0A0A0LJ96 TIR domain-containing protein7.0e-2354.24Show/hide
Query:  LEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL-------------SHDLISHVILIDYLSWKKKAFIAPCVKFQVTTID
        LEEI K+P+GVVRM+  GC+SLARFP+NI DFISCDDN        V++  +L              +D ++   L DYLSWK+KAFIA CVKF VT  D
Subjt:  LEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL-------------SHDLISHVILIDYLSWKKKAFIAPCVKFQVTTID

Query:  HERVQIECRVSFINDIEV
        HE V++ CRV FINDIEV
Subjt:  HERVQIECRVSFINDIEV

A0A0A0LJK8 TIR domain-containing protein2.8e-2457.6Show/hide
Query:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL---------SHDLISHVI-----LIDYLSWKKKAFIAPCVK
        TMECKLLEEIPK+P+GVV MNA GCISL RFPDNI DFI CDDN        V++  +L         S+  +++ +     LIDYLSWK+KAFI PCVK
Subjt:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDN--------VVRISVL---------SHDLISHVI-----LIDYLSWKKKAFIAPCVK

Query:  FQVTTIDHERVQIECRVSFINDIEV
        FQV +ID + V+ +CRV FINDIEV
Subjt:  FQVTTIDHERVQIECRVSFINDIEV

A0A1S4DZR7 TMV resistance protein N-like7.2e-2049.61Show/hide
Query:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVIL------------------------IDYLSWKKKAFIAPC
        T +CKLLEEIPKIPEG V MNA GC+SLARFPDNI DFISC      +    H +  +++L                        IDYLSWK+KAFIAPC
Subjt:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVIL------------------------IDYLSWKKKAFIAPC

Query:  VKFQVTTIDHERVQIECRVSFINDIEV
        VK QVT        +  RV FIND EV
Subjt:  VKFQVTTIDHERVQIECRVSFINDIEV

A0A5A7V910 TMV resistance protein N-like9.4e-2048.78Show/hide
Query:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRIS-VLSHDL-------------------ISHVILIDYLSWKKKAFIAPCVKFQ
        T+ CKLLEEIP IPEGVV M+AGGC+SLARFP+NI  FISC DN V     LS +L                   I+ ++  D+LSWK+KA   PC KF+
Subjt:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRIS-VLSHDL-------------------ISHVILIDYLSWKKKAFIAPCVKFQ

Query:  VTTIDHERVQIECRVSFINDIEV
        VT  +  R  ++C+V FIN I+V
Subjt:  VTTIDHERVQIECRVSFINDIEV

A0A5A7VD72 TMV resistance protein N-like isoform X27.2e-2047.24Show/hide
Query:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVILID------------------------YLSWKKKAFIAPC
        T+ CKLLEEIP IPEGVVRM+AGGC+SLARFPDNI  FISC DN V      H L   +IL++                         +SWK+KA   PC
Subjt:  TMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVILID------------------------YLSWKKKAFIAPC

Query:  VKFQVTTIDHERVQIECRVSFINDIEV
         KF+VT  +  R  ++C+V FIN I+V
Subjt:  VKFQVTTIDHERVQIECRVSFINDIEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGTAAGTTGCTTGAAGAAATTCCAAAGATTCCAGAAGGAGTAGTTCGTATGAATGCTACAATGGAGTGTAAGTTGCTTGAAGAAATTCCAAAGATTCCAGAAGG
AGTAGTTCGTATGAATGCTGGAGGGTGCATATCATTGGCCAGATTTCCTGACAACATAGTTGATTTTATATCCTGTGATGATAATGTGGTGCGTATCTCTGTTCTTTCTC
ATGACCTCATCTCTCATGTAATTCTTATTGATTATCTAAGTTGGAAAAAGAAGGCTTTTATTGCTCCTTGTGTCAAATTTCAAGTTACGACTATTGATCACGAGCGAGTT
CAAATTGAATGTAGAGTGTCGTTTATCAACGATATTGAAGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATGTAAGTTGCTTGAAGAAATTCCAAAGATTCCAGAAGGAGTAGTTCGTATGAATGCTACAATGGAGTGTAAGTTGCTTGAAGAAATTCCAAAGATTCCAGAAGG
AGTAGTTCGTATGAATGCTGGAGGGTGCATATCATTGGCCAGATTTCCTGACAACATAGTTGATTTTATATCCTGTGATGATAATGTGGTGCGTATCTCTGTTCTTTCTC
ATGACCTCATCTCTCATGTAATTCTTATTGATTATCTAAGTTGGAAAAAGAAGGCTTTTATTGCTCCTTGTGTCAAATTTCAAGTTACGACTATTGATCACGAGCGAGTT
CAAATTGAATGTAGAGTGTCGTTTATCAACGATATTGAAGTATAG
Protein sequenceShow/hide protein sequence
MECKLLEEIPKIPEGVVRMNATMECKLLEEIPKIPEGVVRMNAGGCISLARFPDNIVDFISCDDNVVRISVLSHDLISHVILIDYLSWKKKAFIAPCVKFQVTTIDHERV
QIECRVSFINDIEV