; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G02940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G02940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationChr2:1993981..1999794
RNA-Seq ExpressionCSPI02G02940
SyntenyCSPI02G02940
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139237.1 pathogenesis-related protein PR-4A [Cucumis sativus]6.4e-6786.62Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWR RYDWTAFCGPVGPRGQASCGRCLKV N ET    TV
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQCSNGGLDLD   F+ +DTNGNG+  GHL V+Y FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]1.3e-6481.69Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPLEWR RY WTAFCGPVGPRG+ SCGRCL+V NTETG  E V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHL V+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]5.1e-6480.99Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+EWR +Y WTAFCGPVGPRGQASCGRCL+V NTETG  E V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHLIV+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]1.7e-6480.28Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+EWR +Y WTAFCGPVGPRGQASCGRCL+V NTETG  E V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHLIV+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]9.2e-6683.8Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGSI+MIL+LALGVLS+ANAQSA NVRATYHLYNPQNINWDY++ASVYCATWDANKPLEWR RY WTAFCGPVGPRGQASCGRCL+V NTETG    V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQCSNGGLDLD  VF++LDTNGNG  RGHL V+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG76 Barwin domain-containing protein3.1e-6786.62Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWR RYDWTAFCGPVGPRGQASCGRCLKV N ET    TV
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQCSNGGLDLD   F+ +DTNGNG+  GHL V+Y FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like6.4e-6581.69Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPLEWR RY WTAFCGPVGPRG+ SCGRCL+V NTETG  E V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHL V+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like6.4e-6581.69Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPLEWR RY WTAFCGPVGPRG+ SCGRCL+V NTETG  E V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHL V+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like2.4e-6480.99Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+EWR +Y WTAFCGPVGPRGQASCGRCL+V NTETG  E V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHLIV+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like8.4e-6580.28Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV
        MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+EWR +Y WTAFCGPVGPRGQASCGRCL+V NTETG  E V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETV

Query:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHLIV+Y+FVNC
Subjt:  RIVDQCSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN18.7e-5170.59Show/hide
Query:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDFGVFQKLDT
        SA NVRATYH+YNPQN+ WD    S YC+TWDANKPL WR +Y WTAFCGPVGPRG+ SCG+CL+V NT TG + TVRIVDQCSNGGLDLD  VF+++DT
Subjt:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDFGVFQKLDT

Query:  NGNGFARGHLIVDYRFVNC
        +GNG  +GHLIV+Y+FV+C
Subjt:  NGNGFARGHLIVDYRFVNC

P09762 Wound-induced protein WIN22.5e-5070.59Show/hide
Query:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDFGVFQKLDT
        SA NVRATYH+YNPQN+ WD    S YC+TWDANKP  WR +Y WTAFCGPVGPRG+ SCG+CL+V NT TG + TVRIVDQCSNGGLDLD  VFQ++DT
Subjt:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDFGVFQKLDT

Query:  NGNGFARGHLIVDYRFVNC
        +G G  +GHLIV+Y+FVNC
Subjt:  NGNGFARGHLIVDYRFVNC

P29062 Pathogenesis-related protein PR-4A1.3e-5469.34Show/hide
Query:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQ
        + + LL+   V+++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR +Y WTAFCGP GPRGQ SCGRCL+V NT TG + TVRIVDQ
Subjt:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQ

Query:  CSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        CSNGGLDLD  VF +LDTNG G+ +GHL V+Y FVNC
Subjt:  CSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

P29063 Pathogenesis-related protein PR-4B7.6e-5569.34Show/hide
Query:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQ
        + + LL+   ++++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR +Y WTAFCGP GPRGQ SCGRCL+V NT TG + TVRIVDQ
Subjt:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQ

Query:  CSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC
        CSNGGLDLD  VF +LDTNG G+ +GHLIV+Y FVNC
Subjt:  CSNGGLDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC

P32045 Pathogenesis-related protein P23.1e-5676.38Show/hide
Query:  VLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDF
        ++++A AQSATNVRATYHLYNPQNINWD   ASVYCATWDA+KPLEWR RY WTAFCGP GP GQASCGRCL+V NT TG +ETVRIVDQC NGGLDLD 
Subjt:  VLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDF

Query:  GVFQKLDTNGNGFARGHLIVDYRFVNC
         VF +LDTNG G+ RG+L V+Y FVNC
Subjt:  GVFQKLDTNGNGFARGHLIVDYRFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 42.2e-4966.67Show/hide
Query:  QSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDFGVFQKLD
        +SA+NVRATYH YNP   NWD    S YC+TWDA+KP  WR +Y WTAFCGP GPRGQASCG+CL+V+NT T    TVRIVDQCSNGGLDLD  +F ++D
Subjt:  QSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGGLDLDFGVFQKLD

Query:  TNGNGFARGHLIVDYRFVNC
        T+G G+ +GHLIVDY+FV+C
Subjt:  TNGNGFARGHLIVDYRFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGGAAGTATTGTGATGATATTGTTGTTGGCTTTGGGGGTTTTGAGCTTGGCAAATGCTCAAAGTGCTACAAATGTAAGAGCTACTTATCATTTGTATAACCC
ACAAAACATCAATTGGGACTACATGAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCATCGGTACGATTGGACTGCTTTCTGTGGCC
CAGTTGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAAGGTGAGAAACACAGAAACAGGAGATGAAGAAACAGTAAGAATTGTGGATCAATGCAGCAATGGTGGC
TTAGATTTGGACTTTGGTGTTTTTCAAAAATTGGACACTAATGGAAATGGCTTTGCTCGTGGTCATCTTATAGTTGATTACCGCTTCGTTAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGGAAGTATTGTGATGATATTGTTGTTGGCTTTGGGGGTTTTGAGCTTGGCAAATGCTCAAAGTGCTACAAATGTAAGAGCTACTTATCATTTGTATAACCC
ACAAAACATCAATTGGGACTACATGAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCATCGGTACGATTGGACTGCTTTCTGTGGCC
CAGTTGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAAGGTGAGAAACACAGAAACAGGAGATGAAGAAACAGTAAGAATTGTGGATCAATGCAGCAATGGTGGC
TTAGATTTGGACTTTGGTGTTTTTCAAAAATTGGACACTAATGGAAATGGCTTTGCTCGTGGTCATCTTATAGTTGATTACCGCTTCGTTAATTGCTAA
Protein sequenceShow/hide protein sequence
MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRHRYDWTAFCGPVGPRGQASCGRCLKVRNTETGDEETVRIVDQCSNGG
LDLDFGVFQKLDTNGNGFARGHLIVDYRFVNC