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CSPI02G03170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G03170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZeta-carotene desaturase
Genome locationChr2:2164250..2166439
RNA-Seq ExpressionCSPI02G03170
SyntenyCSPI02G03170
Gene Ontology termsNA
InterPro domainsIPR018790 - Protein of unknown function DUF2358


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139222.1 uncharacterized protein LOC101220191 isoform X1 [Cucumis sativus]6.6e-78100Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

XP_008455790.1 PREDICTED: uncharacterized protein LOC103495870 [Cucumis melo]1.3e-7092.67Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        MAGI YCPPLPPSLSPKTVS IRC SSSPENSNGSRKKEAS I+KITVSGITELLRLFSSPISKRVD IRDNQ EEFVVTGVDEVV+ILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        G FTSAIYTD CLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQL+TINK
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

XP_022946926.1 uncharacterized protein LOC111450860 [Cucurbita moschata]3.0e-7089.33Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        M GICYCPPLPPSLSPK V+ IRCFSSSPENSN SRKKEASAIVKI VSG+TELLRLFSSPISKRVD + DNQGEEFVV G+D+V+NILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        GIFTSAIY DDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTI+K
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

XP_022999247.1 uncharacterized protein LOC111493675 [Cucurbita maxima]1.7e-7090Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        M GICYCPPLPPSLSPK V+ IRCFSSSPENSNGSRKKEASAIVKI VSG TELLRLFSSPISKRV+ + DNQGEEFVV G+D+V+NILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        GIFTSAIY DDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

XP_023545588.1 uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo]3.5e-7190Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        M GICYCPPLPPSLSPK V+ IRCFSSSPENSNGSR+KEASAIVKI VSG+TELLRLFSSPISKRVD + DNQGEEFVV G+D+V+NILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        GIFTSAIY DDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

TrEMBL top hitse value%identityAlignment
A0A0A0LJD8 Uncharacterized protein3.2e-78100Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

A0A1S3C2Z9 uncharacterized protein LOC1034958706.4e-7192.67Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        MAGI YCPPLPPSLSPKTVS IRC SSSPENSNGSRKKEAS I+KITVSGITELLRLFSSPISKRVD IRDNQ EEFVVTGVDEVV+ILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        G FTSAIYTD CLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQL+TINK
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

A0A6J1CMH1 uncharacterized protein LOC111012984 isoform X55.8e-5668.97Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSP------------------------ISKRVDEIRDNQGEE
        MAGIC  PPLP SLSPKT   +RCFSSSP+NS G RKKEAS IVKI VSG+TELLRLFSS                         +S R D + DNQ EE
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSP------------------------ISKRVDEIRDNQGEE

Query:  FVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        FVV GVD+V++ILKSDY+NAYFVTGIFTS IY DDCLFEDPTI+FRGKELYSRNLKLLVPFFDCPSIQLQ INK
Subjt:  FVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

A0A6J1G4Y1 uncharacterized protein LOC1114508601.4e-7089.33Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        M GICYCPPLPPSLSPK V+ IRCFSSSPENSN SRKKEASAIVKI VSG+TELLRLFSSPISKRVD + DNQGEEFVV G+D+V+NILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        GIFTSAIY DDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTI+K
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

A0A6J1KAD4 uncharacterized protein LOC1114936758.4e-7190Show/hide
Query:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT
        M GICYCPPLPPSLSPK V+ IRCFSSSPENSNGSRKKEASAIVKI VSG TELLRLFSSPISKRV+ + DNQGEEFVV G+D+V+NILKSDYENAYFVT
Subjt:  MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVT

Query:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
        GIFTSAIY DDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK
Subjt:  GIFTSAIYTDDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46100.1 Nuclear transport factor 2 (NTF2) family protein3.6e-0541.3Show/hide
Query:  VVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRFRGKELYSRN
        VV+ +K D++ +YFVTG  T  +Y + C F DP   F+G   + RN
Subjt:  VVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRFRGKELYSRN

AT2G46100.2 Nuclear transport factor 2 (NTF2) family protein3.6e-0541.3Show/hide
Query:  VVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRFRGKELYSRN
        VV+ +K D++ +YFVTG  T  +Y + C F DP   F+G   + RN
Subjt:  VVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRFRGKELYSRN

AT3G04890.1 Uncharacterized conserved protein (DUF2358)5.8e-3254.26Show/hide
Query:  RCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFS-SPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRF
        RCFS SPE       K+  A++K  VSG+TE LRL S +P S  +   +D    E     VD+V+ IL+SDY N YFVTG+ TSAIY+DDC+FEDPTI F
Subjt:  RCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFS-SPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRF

Query:  RGKELYSRNLKLLVPFFDCPSIQLQTINK
        +G ELY RNLKLLVPF +  SI+LQ + K
Subjt:  RGKELYSRNLKLLVPFFDCPSIQLQTINK

AT3G04890.2 Uncharacterized conserved protein (DUF2358)5.8e-3254.26Show/hide
Query:  RCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFS-SPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRF
        RCFS SPE       K+  A++K  VSG+TE LRL S +P S  +   +D    E     VD+V+ IL+SDY N YFVTG+ TSAIY+DDC+FEDPTI F
Subjt:  RCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFS-SPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIRF

Query:  RGKELYSRNLKLLVPFFDCPSIQLQTINK
        +G ELY RNLKLLVPF +  SI+LQ + K
Subjt:  RGKELYSRNLKLLVPFFDCPSIQLQTINK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATCTGTTACTGTCCACCGCTTCCTCCATCTCTATCCCCCAAGACTGTATCCGTCATAAGATGCTTCTCAAGCTCACCGGAGAATTCTAATGGTAGCAGGAA
GAAAGAGGCATCTGCGATTGTGAAAATCACTGTGAGTGGAATCACAGAGCTTCTTAGGCTTTTCTCTTCGCCGATCAGTAAGAGAGTTGATGAAATTAGGGACAATCAGG
GAGAGGAGTTTGTGGTTACAGGCGTTGATGAGGTTGTAAATATCCTGAAATCAGATTATGAGAATGCCTACTTTGTTACTGGGATATTCACTTCTGCAATTTATACTGAC
GATTGTCTTTTTGAAGATCCAACCATCAGATTTCGAGGCAAGGAGCTGTATTCCCGGAACTTAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCAATCCAATTACAAAC
AATTAATAAGGTAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATCGGAGAGAAGCTAAGCGACGCCGGAGGCACCGTCTCCGGAGAGGATAATGGCCGGAATCTGTTACTGTCCACCGCTTCCTCCATCTCTATCCCCCAAGACTGTATCCG
TCATAAGATGCTTCTCAAGCTCACCGGAGAATTCTAATGGTAGCAGGAAGAAAGAGGCATCTGCGATTGTGAAAATCACTGTGAGTGGAATCACAGAGCTTCTTAGGCTT
TTCTCTTCGCCGATCAGTAAGAGAGTTGATGAAATTAGGGACAATCAGGGAGAGGAGTTTGTGGTTACAGGCGTTGATGAGGTTGTAAATATCCTGAAATCAGATTATGA
GAATGCCTACTTTGTTACTGGGATATTCACTTCTGCAATTTATACTGACGATTGTCTTTTTGAAGATCCAACCATCAGATTTCGAGGCAAGGAGCTGTATTCCCGGAACT
TAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCAATCCAATTACAAACAATTAATAAGGTAATTTGATCTTGTGATTTAATCTTCTTTTGACTTTGATTGAAGAATGAG
TGAATGGACGGAGTTAATACCTTTTTTTGGCCTTTTGGCTAAGATCAATAGCAAATGCATGCTGCTGGGATCGGATTGGGAACAAATTTTCTACTGTTTTCTTTTTTTCT
GTCATGGGGGACAAAATTTTATTGAAATTTTGGTAAATCGAGGATGTATTTGGCTGCTGAGAAAGGGGAC
Protein sequenceShow/hide protein sequence
MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSSPISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTD
DCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINKVI