; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G03200 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G03200
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein S24
Genome locationChr2:2203585..2205264
RNA-Seq ExpressionCSPI02G03200
SyntenyCSPI02G03200
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001976 - Ribosomal protein S24e
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR018098 - Ribosomal S24e conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139219.1 40S ribosomal protein S24-1 [Cucumis sativus]1.1e-66100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_008455742.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]3.4e-6597.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_022143165.1 40S ribosomal protein S24-1 [Momordica charantia]2.6e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_022937688.1 40S ribosomal protein S24-1-like [Cucurbita moschata]5.2e-6699.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_022999263.1 40S ribosomal protein S24-1-like [Cucurbita maxima]2.6e-6597.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPN+IFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASD+AK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LFK1 40S ribosomal protein S245.1e-67100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A6J1CN14 40S ribosomal protein S241.3e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A6J1FGN1 40S ribosomal protein S242.5e-6699.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A6J1HN66 40S ribosomal protein S242.5e-6699.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A6J1KJ42 40S ribosomal protein S241.3e-6597.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPN+IFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASD+AK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

SwissProt top hitse value%identityAlignment
P62847 40S ribosomal protein S244.0e-3764.57Show/hide
Query:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ VIDVLHPG+  V K E++EKL ++Y    P+ IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAK
        RKQ KERKNR KK+RG  K       K
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAK

Q56JU9 40S ribosomal protein S244.0e-3764.39Show/hide
Query:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ VIDVLHPG+  V K E++EKL ++Y    P+ IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        RKQ KERKNR KK+RG  K         GKKK
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

Q8LC83 40S ribosomal protein S24-24.9e-5987.12Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q962Q6 40S ribosomal protein S241.9e-3963.64Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        M +   TIRTRKFMTNRLL+RKQ V DVLHPG+P VSK E++EKL ++Y V  P+ +FVF F+T+FGGGKSTGF LIYD+++ AKK+EPK+RL R+GL  
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K   +RKQ KERKNR KK+RG KK+K   AAK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q9SS17 40S ribosomal protein S24-19.0e-6190.15Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Arabidopsis top hitse value%identityAlignment
AT3G04920.1 Ribosomal protein S24e family protein6.4e-6290.15Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

AT5G28060.1 Ribosomal protein S24e family protein3.5e-6087.12Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACAAAGCAGTCACCATTCGGACCAGGAAGTTCATGACCAACAGGCTTCTCTCCAGGAAGCAATTCGTCATTGATGTTCTTCACCCCGGCAGACCCAACGTCTC
AAAGGCTGAGCTGAAAGAGAAGCTGGGCAGAATCTATGATGTGAAGGATCCAAATGCCATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGT
TCGGTTTGATCTATGATTCCGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGAATGGCCTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAG
GAAAGGAAGAACAGGGCAAAGAAAATCCGAGGTGTTAAGAAGACCAAGGCTTCAGACGCAGCAAAAGGAGGAAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
GGGTTTTGTTCTCTCTTTCAACATCCCAATATCAGGACTCTCCTGCCGCTCTTCTCTTCGCCGTCGCCTCCTTCGAGCTTCAAGCCTCCCATCCTCTTCAGCCATGGCGG
ACAAAGCAGTCACCATTCGGACCAGGAAGTTCATGACCAACAGGCTTCTCTCCAGGAAGCAATTCGTCATTGATGTTCTTCACCCCGGCAGACCCAACGTCTCAAAGGCT
GAGCTGAAAGAGAAGCTGGGCAGAATCTATGATGTGAAGGATCCAAATGCCATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGTTCGGTTT
GATCTATGATTCCGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGAATGGCCTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAGGAAAGGA
AGAACAGGGCAAAGAAAATCCGAGGTGTTAAGAAGACCAAGGCTTCAGACGCAGCAAAAGGAGGAAAGAAGAAATAAATTTGCTGGAATTTTGTGCTTATGGTGGGCAAA
GATAATCTGCAGAATTGTGTTTTTTCGTTTAGTAGAGTCCCTTTTAGCTATCTTCTTACTCTTCAATTAAATTATGTTAATCAGTGATTTGGTTGTTGGTGATTAGTGAT
ATGAAAACTTTAGTTCTTTTGCAAGAGGACAGAATTTTTGACATTACATTTCCTTGTTTCTCTTTTTGATGTTTTGGTTGACACTTTAACCCATTGAGGCTATCATTGGT
AGATTATGAAAATTGATTGATGGGATAATTCCAAAGCTTTATCAAATCTTCTACTTTGAGTTGTTTGAATCATAGAACTATAGTGTATTAACATTAGACTTCTTTTTT
Protein sequenceShow/hide protein sequence
MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMK
ERKNRAKKIRGVKKTKASDAAKGGKKK