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CSPI02G03620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G03620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTMV resistance protein N-like
Genome locationChr2:2548193..2548495
RNA-Seq ExpressionCSPI02G03620
SyntenyCSPI02G03620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33671.1 LRR disease resistance-like protein [Cucumis melo subsp. melo]4.4e-2254.21Show/hide
Query:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE
        +EGMG T LANSL NKFKWM       KEH++SEALDN T   +I+GRE++   W W HH KR DG+ GTNI TTHTIS K YL++F+E E    +F W 
Subjt:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE

Query:  TIRRVIR
          +R I+
Subjt:  TIRRVIR

KAA0047972.1 TMV resistance protein N-like [Cucumis melo var. makuwa]4.0e-2357.41Show/hide
Query:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW
        MEGMG T LANSL NKFKWM       KEH+YSEALDN TS+ +I+GRE++R  W W  HH KR DG+ GTNI TTHTIS K YL++F+E E    +F W
Subjt:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW

Query:  ETIRRVIR
           +R I+
Subjt:  ETIRRVIR

KGN60872.1 hypothetical protein Csa_023430 [Cucumis sativus]9.1e-5299Show/hide
Query:  MEGMGGTALANSLYNKFKWMKEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWETIRRVIR
        MEGMGGTALANSLY+KFKWMKEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWETIRRVIR
Subjt:  MEGMGGTALANSLYNKFKWMKEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWETIRRVIR

TYK18295.1 TMV resistance protein N-like [Cucumis melo var. makuwa]2.2e-2153.27Show/hide
Query:  MEGMGGTALANSLYNKFKWMKE-------HYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE
        MEGMG T LANSL NKFKWMK+       H+YSEALDN TS  +I+GR++++  W W HH KR D   GTNI  THTIS K YL++F+E E    +F W 
Subjt:  MEGMGGTALANSLYNKFKWMKE-------HYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE

Query:  TIRRVIR
          +R I+
Subjt:  TIRRVIR

TYK18305.1 TMV resistance protein N-like [Cucumis melo var. makuwa]4.0e-2357.41Show/hide
Query:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW
        MEGMG T LANSL NKFKWM       KEH+YSEALDN TS+ +I+GRE++R  W W  HH KR DG+ GTNI TTHTIS K YL++F+E E    +F W
Subjt:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW

Query:  ETIRRVIR
           +R I+
Subjt:  ETIRRVIR

TrEMBL top hitse value%identityAlignment
A0A0A0LJI2 Uncharacterized protein4.4e-5299Show/hide
Query:  MEGMGGTALANSLYNKFKWMKEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWETIRRVIR
        MEGMGGTALANSLY+KFKWMKEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWETIRRVIR
Subjt:  MEGMGGTALANSLYNKFKWMKEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWETIRRVIR

A0A5A7TWU2 TMV resistance protein N-like1.9e-2357.41Show/hide
Query:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW
        MEGMG T LANSL NKFKWM       KEH+YSEALDN TS+ +I+GRE++R  W W  HH KR DG+ GTNI TTHTIS K YL++F+E E    +F W
Subjt:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW

Query:  ETIRRVIR
           +R I+
Subjt:  ETIRRVIR

A0A5D3D427 TMV resistance protein N-like1.1e-2153.27Show/hide
Query:  MEGMGGTALANSLYNKFKWMKE-------HYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE
        MEGMG T LANSL NKFKWMK+       H+YSEALDN TS  +I+GR++++  W W HH KR D   GTNI  THTIS K YL++F+E E    +F W 
Subjt:  MEGMGGTALANSLYNKFKWMKE-------HYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE

Query:  TIRRVIR
          +R I+
Subjt:  TIRRVIR

A0A5D3D437 TMV resistance protein N-like1.9e-2357.41Show/hide
Query:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW
        MEGMG T LANSL NKFKWM       KEH+YSEALDN TS+ +I+GRE++R  W W  HH KR DG+ GTNI TTHTIS K YL++F+E E    +F W
Subjt:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLW-PHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQW

Query:  ETIRRVIR
           +R I+
Subjt:  ETIRRVIR

E5GB29 LRR disease resistance-like protein2.1e-2254.21Show/hide
Query:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE
        +EGMG T LANSL NKFKWM       KEH++SEALDN T   +I+GRE++   W W HH KR DG+ GTNI TTHTIS K YL++F+E E    +F W 
Subjt:  MEGMGGTALANSLYNKFKWM-------KEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWE

Query:  TIRRVIR
          +R I+
Subjt:  TIRRVIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCATGGGAGGCACTGCACTCGCCAACTCTCTGTACAATAAATTTAAATGGATGAAGGAGCACTACTACAGTGAAGCTTTAGATAATCCTACAAGCCTTTTATA
TATCCAAGGAAGAGAGATAGAGAGAGTTCCCTGGTTGTGGCCCCACCACCTTAAGCGTGAAGATGGTGAATTTGGAACCAATATCACAACAACCCATACAATATCCTTCA
AACGCTATTTGATAGTCTTTTATGAAGAGGAGATGATTACATTTGTATTTCAATGGGAAACTATACGGCGTGTGATTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCATGGGAGGCACTGCACTCGCCAACTCTCTGTACAATAAATTTAAATGGATGAAGGAGCACTACTACAGTGAAGCTTTAGATAATCCTACAAGCCTTTTATA
TATCCAAGGAAGAGAGATAGAGAGAGTTCCCTGGTTGTGGCCCCACCACCTTAAGCGTGAAGATGGTGAATTTGGAACCAATATCACAACAACCCATACAATATCCTTCA
AACGCTATTTGATAGTCTTTTATGAAGAGGAGATGATTACATTTGTATTTCAATGGGAAACTATACGGCGTGTGATTAGATAA
Protein sequenceShow/hide protein sequence
MEGMGGTALANSLYNKFKWMKEHYYSEALDNPTSLLYIQGREIERVPWLWPHHLKREDGEFGTNITTTHTISFKRYLIVFYEEEMITFVFQWETIRRVIR