; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G04010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G04010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF-box domain LysM domain containing protein
Genome locationChr2:2794023..2796465
RNA-Seq ExpressionCSPI02G04010
SyntenyCSPI02G04010
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR018392 - LysM domain
IPR036047 - F-box-like domain superfamily
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586259.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-13288.15Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP + SPP Q P   D S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
         T HLYG+ T++QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_004139174.1 F-box protein At1g55000 [Cucumis sativus]4.9e-153100Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM

Query:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022150720.1 F-box protein At1g55000 [Momordica charantia]2.5e-13690.33Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNP+ A+HSP   PP AD S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM

Query:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022937590.1 F-box protein At1g55000 [Cucurbita moschata]9.7e-13388.52Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP + SPP Q P   D S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
         T HLYGK T++QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_038877035.1 F-box protein At1g55000 [Benincasa hispida]2.8e-14092.19Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNPSP + S PP+PPP D SA +LSPMNSHF ALSCRDILRLIFENLSIPDLARSSCV RLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNM+SDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIP+
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM

Query:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGK T E+GMSSVQVNKRVLH LSRSMMVDDETAQYYLSISNG+PRAALTEFAEDIRWERH+SIA
Subjt:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

TrEMBL top hitse value%identityAlignment
A0A0A0LFS6 LysM domain-containing protein2.4e-153100Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM

Query:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A5A7TYE5 Lipoxygenase6.6e-11996.79Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNPSP +HSPP QPPPADHS AILSPMNSHFFALSCRDILRLIFE+LSIPDLARSSCVCRLWHSVASDQEIV+GAFKAPWKVKD
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIPM
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM

Query:  TQHLYGKVTSEQGMSSVQ
        TQHLYGKVTSEQGMSSVQ
Subjt:  TQHLYGKVTSEQGMSSVQ

A0A6J1D9A3 F-box protein At1g550001.2e-13690.33Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCCDQDDDVEILRHLNP+ A+HSP   PP AD S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPM

Query:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  TQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1FH66 F-box protein At1g550004.7e-13388.52Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP + SPP Q P   D S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
         T HLYGK T++QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1HS58 F-box protein At1g550006.8e-13287.78Show/hide
Query:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCCD+DDDVEILRHL+PSP + SPP Q P     S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCDQDDDVEILRHLNPSPALHSPPPQPPP-ADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNPN+LINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
         T HLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  MTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

SwissProt top hitse value%identityAlignment
Q6DEF4 LysM and putative peptidoglycan-binding domain-containing protein 26.8e-0440.38Show/hide
Query:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+
Subjt:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI

Q7Z3D4 LysM and putative peptidoglycan-binding domain-containing protein 36.8e-0431.34Show/hide
Query:  RDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSIC
        RD       ++  I  GD+L ++A++Y   V DIKR+NN++SD   ++   + IP+   + L  ++C
Subjt:  RDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSIC

Q9FZ32 F-box protein At1g550004.7e-7460Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP +L N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein3.4e-7560Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP +L N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein3.4e-7560Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP +L N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein3.4e-7560Show/hide
Query:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP +L N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein1.1e-0638.71Show/hide
Query:  SSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        SS  F   N   +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Subjt:  SSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein1.7e-0542.55Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGCTGTTGCGATCAAGACGACGACGTTGAGATCCTCAGACACCTCAATCCCTCCCCGGCCCTTCACTCTCCACCGCCGCAACCTCCACCCGCGGATCATTCCGC
TGCCATATTGTCTCCCATGAACTCTCACTTTTTCGCCCTCTCCTGCCGCGATATCCTCCGCCTCATCTTCGAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCG
TTTGCCGTCTATGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGGAAGCCGAGCTCCTGGAGCTTC
TGGAGAGATAATTGCCTTGGGAAGTTTGCAATTTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTTAAGTATTCTGTTCAGGTTACAGACATAAAACG
TCTGAACAACATGATGAGTGACCATGGCATATACTCAAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATGCTCATTAACAGTATATGTTACATCGAGATGGATG
CTATTGCAAAACGAGAAGTTGCAGTGTTATATTTGGACGGAATCCCCATGACCCAACATTTGTATGGTAAGGTGACATCCGAACAAGGTATGTCTTCTGTTCAAGTGAAC
AAGCGGGTACTTCATTCATTGAGTCGAAGCATGATGGTTGACGACGAGACCGCTCAATATTACTTATCCATTTCCAATGGCAATCCTCGAGCTGCTCTTACAGAATTTGC
CGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATAAAATCCAACAAAAACACAACCATTCATTTCATTCTCTCTCTCTCTAAAATGGGATGCTGTTGCGATCAAGACGACGACGTTGAGATCCTCAGACACCTCAATCCCTC
CCCGGCCCTTCACTCTCCACCGCCGCAACCTCCACCCGCGGATCATTCCGCTGCCATATTGTCTCCCATGAACTCTCACTTTTTCGCCCTCTCCTGCCGCGATATCCTCC
GCCTCATCTTCGAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTATGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAA
GCGCCGTGGAAGGTGAAGGATGTGGTCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTGCCTTGGGAAGTTTGCAATTTCTCATCGAATTCTCCGCGGCGATAG
CTTGGCTAGTCTAGCCGTTAAGTATTCTGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGTGACCATGGCATATACTCAAGAGAAAGATTGTTAATCCCCA
TTGGCAATCCCAATATGCTCATTAACAGTATATGTTACATCGAGATGGATGCTATTGCAAAACGAGAAGTTGCAGTGTTATATTTGGACGGAATCCCCATGACCCAACAT
TTGTATGGTAAGGTGACATCCGAACAAGGTATGTCTTCTGTTCAAGTGAACAAGCGGGTACTTCATTCATTGAGTCGAAGCATGATGGTTGACGACGAGACCGCTCAATA
TTACTTATCCATTTCCAATGGCAATCCTCGAGCTGCTCTTACAGAATTTGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAATTCTCACAAAGGCAGATTG
TTGCTTCGGGTAAAGATAGTGTGTAAATTATTCAGATGCTTTCTACTGGAATCTGTTGTTATTCCTCTCCATATCCACAAAGAATGATTAGATCAAGAATCCGTATCCAA
CACCAATTCACTCCTTGGCTCATTGGCTGATTGGTATGTACATCTACATCTACATTCTTACTGTCATTTGAATGAGGCATTTTGCCTCGTTTCATTATTGTGTATATATA
TATATGATATGATGTATTCTCATATTTACTTGAAGATGATGATGCTCTATTGTGTTTAGCTGTAAATCTAATGTTCTTGGAAGTTAAAAACATGTCTATTTAAGCAAAAA
ACATTGTA
Protein sequenceShow/hide protein sequence
MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSF
WRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVN
KRVLHSLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA