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CSPI02G04890 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G04890
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTrafficking protein particle complex subunit
Genome locationChr2:3491055..3493475
RNA-Seq ExpressionCSPI02G04890
SyntenyCSPI02G04890
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007233 - Trafficking protein particle complex subunit
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61053.2 hypothetical protein Csa_021294 [Cucumis sativus]4.8e-75100Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

XP_004144741.1 trafficking protein particle complex subunit 4 [Cucumis sativus]4.8e-75100Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

XP_008453237.1 PREDICTED: trafficking protein particle complex subunit 4 [Cucumis melo]1.4e-7499.29Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQK+RVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

XP_022156391.1 trafficking protein particle complex subunit 4 [Momordica charantia]2.7e-7396.45Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQKDRVAL GR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

XP_041018648.1 trafficking protein particle complex subunit 4 [Juglans microcarpa x Juglans regia]1.7e-7295.74Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLK IYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTD+VLKNPFYEMEMPIRCELFDINL QAVQKDRVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

TrEMBL top hitse value%identityAlignment
A0A0A0LJ20 Trafficking protein particle complex subunit2.3e-75100Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

A0A1S3BVQ7 Trafficking protein particle complex subunit6.8e-7599.29Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQK+RVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

A0A5A7TWY1 Trafficking protein particle complex subunit6.8e-7599.29Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQK+RVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

A0A6J1DUU4 Trafficking protein particle complex subunit1.3e-7396.45Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQKDRVAL GR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

A0A6J1KK16 Trafficking protein particle complex subunit1.9e-7295.74Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG ELLEADTFDLHCFQSLTGTKFFVVCEPGT HME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTD+VLKNPFYEMEMPIRCELFDINL QAVQKDRVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR

SwissProt top hitse value%identityAlignment
Q2TBL9 Trafficking protein particle complex subunit 41.5e-3158.49Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P    ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LAQAVQ
        L  A++
Subjt:  LAQAVQ

Q54UU1 Trafficking protein particle complex subunit 44.3e-3452Show/hide
Query:  IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAG-CSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELY
        I S+YI+NK+G LI+  D+G+  ++  N  +R+ S +HS+HAI+  LSP++G  SG+E++E + F L CFQ+ TG KF+V+ +P  Q +E LL  +YELY
Subjt:  IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAG-CSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELY

Query:  TDFVLKNPFYEMEMPIRCELFDINL
        TD+VLKNPFYE+EM IRC+LFD  L
Subjt:  TDFVLKNPFYEMEMPIRCELFDINL

Q69BT7 Trafficking protein particle complex subunit 41.5e-3158.49Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P    ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LAQAVQ
        L  A++
Subjt:  LAQAVQ

Q9ES56 Trafficking protein particle complex subunit 41.5e-3158.49Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P    ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LAQAVQ
        L  A++
Subjt:  LAQAVQ

Q9Y296 Trafficking protein particle complex subunit 43.4e-3157.55Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHC+Q+LTG KF V+ +P    ++SLL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LAQAVQ
        L  A++
Subjt:  LAQAVQ

Arabidopsis top hitse value%identityAlignment
AT1G51160.1 SNARE-like superfamily protein4.0e-1127.08Show/hide
Query:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------------AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGT
        + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ P+               GCS       +T+ L   ++ +G K  +V  P T
Subjt:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------------AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGT

Query:  QHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ
          +   LKYIY LY ++V+KNP Y    PI+ ELF+  L Q V+
Subjt:  QHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ

AT1G51160.2 SNARE-like superfamily protein4.0e-1127.08Show/hide
Query:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------------AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGT
        + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ P+               GCS       +T+ L   ++ +G K  +V  P T
Subjt:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------------AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGT

Query:  QHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ
          +   LKYIY LY ++V+KNP Y    PI+ ELF+  L Q V+
Subjt:  QHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQ

AT5G02280.1 SNARE-like superfamily protein1.4e-7290.78Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE
        MAAIYSLYIINKSGGLIFYKD G+ GRMDTNDSLRVASLWHSMHAISQQLSP+ GCSG+ELLEADTFDLHCFQSL GTKFFVVCEPGT HMESLL+YIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR
        LYTD+VLKNPFYE+EMPIRCELFDINL QAVQ DRVALLGR
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGTTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGATACGAATGACAGTTTGAGAGTGGC
GAGTTTGTGGCATTCTATGCATGCCATTTCCCAGCAGCTTTCGCCTATAGCTGGTTGTTCGGGTGTTGAACTTCTTGAAGCTGACACTTTCGATCTCCATTGCTTCCAGT
CACTCACTGGGACAAAGTTTTTTGTTGTGTGTGAACCTGGGACTCAGCACATGGAGAGTCTTCTGAAGTACATTTATGAACTATACACAGATTTTGTCTTGAAGAATCCA
TTCTACGAGATGGAGATGCCTATACGGTGCGAGCTCTTTGACATCAACCTAGCGCAGGCAGTGCAAAAAGATCGTGTTGCTTTGCTTGGCCGATGA
mRNA sequenceShow/hide mRNA sequence
CCCTATTTTAGTATAGAAATTGAAAAAGAAAAAAGAAAAAAGAAAGTCGTCGTAATTACATTTGATCCCCGCCACTGGCAACTCCCCCCCAGTCTCAAGCTCCCCGAAAC
TCCGCCTTAAGATCGGCGTTCACTGAAACTGGGTTTTGCGCCTTCCAATCTACGTTCTTACCCACACTTAATCCCTATCCACACCCATATTTATTTTTATTCTCATTTCC
TTCATAATTCTTCAAATTTTGGATAGATCTAAAGACGATGGCAGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGTTTGATCTTCTACAAGGATTATGGGTCTG
CTGGACGAATGGATACGAATGACAGTTTGAGAGTGGCGAGTTTGTGGCATTCTATGCATGCCATTTCCCAGCAGCTTTCGCCTATAGCTGGTTGTTCGGGTGTTGAACTT
CTTGAAGCTGACACTTTCGATCTCCATTGCTTCCAGTCACTCACTGGGACAAAGTTTTTTGTTGTGTGTGAACCTGGGACTCAGCACATGGAGAGTCTTCTGAAGTACAT
TTATGAACTATACACAGATTTTGTCTTGAAGAATCCATTCTACGAGATGGAGATGCCTATACGGTGCGAGCTCTTTGACATCAACCTAGCGCAGGCAGTGCAAAAAGATC
GTGTTGCTTTGCTTGGCCGATGAGCTTAGGATATCCTTCATTTTGTCAGTATTAAATTCAAGAAAGAAAGGCTCATGATATCATTGTGCAGAATACTTGATAATTTACCA
TCCTTAATGCTAAATGTACTCCGTTCCTAGTGATTCATGTGAGATTTGGTGGAAATAGAATGTTTCTTTTCAGTGTTGTTCATCAGGAAGTCGGGGTTAATTTTATGCCC
ATTTTTTTGTCATGTATACAGATGTGGATCCAGTTAAATGACAGAGCAATGTTATAAGCTTTTGGGATATGGTTAATTTAAGCAGCCAAAGTACTTACATTTTACTTCGA
CCAATTTAGATGAATGAAAGCATCAACTTCATGATGTTCATCGTTGAAATATAACTATGAAGGAATACAAGATAAACCACCCTCGAGCACACCAACTCAAGCTCTAGATC
ACTAAAAAGTTGTCTACCTTTTCTCACTCACCCTATCTTTATAACAAGACTCCGTAACTAACTTCCTACCAAATTACCCCTATACCGCTTTAATACTACCATACAAATAT
ATTCTTATCTACGTACATTACACTATAACATAGTTGTGTAATGAGGCTGTGTGCACTTAAGTCTGGCAGGGATGAGCGAATAGATCAAGT
Protein sequenceShow/hide protein sequence
MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNP
FYEMEMPIRCELFDINLAQAVQKDRVALLGR