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CSPI02G04990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G04990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein S23-1
Genome locationChr2:3536985..3540094
RNA-Seq ExpressionCSPI02G04990
SyntenyCSPI02G04990
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144737.1 uncharacterized protein LOC101221073 [Cucumis sativus]4.5e-48100Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
XP_008453135.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo]1.2e-4595.88Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]8.3e-4287.63Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FWILCRLHYGPRITV RSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD RK+
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]8.3e-4289.58Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
        MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]2.6e-4390.72Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD RK+
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
TrEMBL top hitse value%identityAlignment
A0A0A0LH12 Uncharacterized protein2.2e-48100Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
A0A1S3BWM4 uncharacterized protein LOC1034939376.0e-4695.88Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
A0A5D3BBN9 40S ribosomal protein S23-16.0e-4695.88Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
A0A6J1DQC3 uncharacterized protein LOC1110232544.0e-4287.63Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FWILCRLHYGPRITV RSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD RK+
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
A0A6J1I1J3 uncharacterized protein LOC1114685994.0e-4289.58Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
        MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein3.7e-4077.08Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
        MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFW+LCRLHYGPRITV RSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
AT1G57540.2 unknown protein3.7e-4077.08Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
        MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFW+LCRLHYGPRITV RSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
AT1G57540.3 unknown protein3.7e-4077.08Show/hide
Query:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK
        MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFW+LCRLHYGPRITV RSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Subjt:  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGG
AGCACTTGGGTTCTGGATTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGG
CTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAA
mRNA sequenceShow/hide mRNA sequence
AAATTTAAAGTTTAGAAAAGCAATTTGTCAAAAGAAGGTAAAGAAGGGAAGGGAACTTCACTCTCTCTTTTGGTACTGAAACCTCAAATTCTTTAACCGGCGGCGGGCCG
CGCCCAAAGCATCGGTACGCCGACGAAGACTTGTGGTCATCGCCTCAACAATTCATCTGTGTTTTTTCTCGCCCCCATTTTCTTTCGGAAATTAGCAGATGGCACTTAGA
CGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGGTT
CTGGATTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCC
GATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAAGGTAATTGACATTTATAGATTAATAATCTTATTGTATCATTAAAAAGT
ATTATTCAGATGTTTCCTTATTAGAAGCTAACTGATGTAATTAGTTTTGGTTAGTTTATGCTCTTGTTATTGTTATGTCTTGTTGACTCTTATCAAAGCCAAGATCCATG
TTTAGATTGTATGTGTGGCTTCATGCCATAAAACTAAAAAGGAGCCTTAGGTCTACCTTTGTATTTTGTTTTTCTCAATAAAAGTTAGTTTATGAGTAGAAAAAAAGCTT
TTAGTCATGTAACAAAGACCAAAATTTCTAATTTTATTGAATTGGATTGGTG
Protein sequenceShow/hide protein sequence
MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL