; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G05250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G05250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF-box protein
Genome locationChr2:3731771..3733997
RNA-Seq ExpressionCSPI02G05250
SyntenyCSPI02G05250
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056113.1 F-box protein SKIP1 [Cucumis melo var. makuwa]2.4e-16493.4Show/hide
Query:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWF AA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNNLDPSQHKGIVPDNYLDA PQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-15188.29Show/hide
Query:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS
        MAEPS WAELT ECLTNI SRLT+EQRWRGPMLVCK W RAATD SLFSHFDLE RF+S PTE PAWW P+FE KIDSMLRSAV+WSLGSLS+IRIRHCS
Subjt:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS

Query:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS
        DSSL LVAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKL+EVDISYCHEISNVSL+LIG+HCPNIKTLKRNFFN LDPSQ KGIVPD+YL+A PQDVDS
Subjt:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS

Query:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
        EA AIAKFM NLE+L+L FSKLSAKALTLIC+GCPNLKYLDLFGCVNLTSRDI+NATSSLE+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Subjt:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

XP_004144728.1 F-box protein SKIP1 [Cucumis sativus]1.1e-17499.67Show/hide
Query:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS
        MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS
Subjt:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS

Query:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS
        DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS
Subjt:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS

Query:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
        EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
Subjt:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

XP_008452697.1 PREDICTED: F-box protein SKIP1 [Cucumis melo]6.2e-16593.73Show/hide
Query:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNNLDPSQHKGIVPDNYLDA PQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]2.2e-15789.97Show/hide
Query:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS
        ++E S WAELTHECLTNILSRLT+EQRWRGPMLVCK W RAATDPSLFSHFDLE RFES PTE PAWW PEFETKIDSMLRSAV WSLGSLS+IRIRHCS
Subjt:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS

Query:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS
        DSSLD VAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKLREVDISYCHEISN+SLALIG+HCPNIKT+KRNFFNNLDPSQHKGIVPDNYL++ PQDVDS
Subjt:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS

Query:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
        EAAAIAKFM NLE+LELGFSKLSAKAL+LICEGCP LK+LDLFGCVNLTSRDI NATSS+E+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Subjt:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

TrEMBL top hitse value%identityAlignment
A0A0A0LM72 F-box domain-containing protein5.5e-17599.67Show/hide
Query:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS
        MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS
Subjt:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS

Query:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS
        DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS
Subjt:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS

Query:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
        EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
Subjt:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

A0A1S3BUE6 F-box protein SKIP13.0e-16593.73Show/hide
Query:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNNLDPSQHKGIVPDNYLDA PQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5A7UJH9 F-box protein SKIP11.1e-16493.4Show/hide
Query:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWF AA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNNLDPSQHKGIVPDNYLDA PQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5D3BD72 F-box protein SKIP13.0e-16593.73Show/hide
Query:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNNLDPSQHKGIVPDNYLDA PQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1G461 F-box protein SKIP1-like1.5e-15187.96Show/hide
Query:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS
        MAEPS WAELT ECLTNI SRLT+EQRWRGPMLVCK W RAATD SLFSHFDLE RF+S PTE PAWW P+FE KIDSMLRSAV+WSLGSLS+IRIRHCS
Subjt:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCS

Query:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS
        DSSL LVAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKL+EVDISYCHEISNVSL+LIG+HCPNIKTLKRNFFN LDPSQ KGIVPD+YL+A PQDVDS
Subjt:  DSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDS

Query:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
        EA AIAKFM NLE+L+L FSKLSAKALTLIC+GCPNLKYLDLFGCVNLTSRDI+NATS+LE+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Subjt:  EAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP12.1e-9157.72Show/hide
Query:  SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSL
        S W  L  E L NI+SRLT+++ W GPM V K W     DP L+S FDLE  F+S P E    W PEFE K+D MLRS V WS G L+ IR+RHCSD +L
Subjt:  SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSL

Query:  DLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAA
           A  CPNL+VL+I+S  NVTD SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H G VP  YLDA PQD D+EA A
Subjt:  DLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAA

Query:  IAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI
        I K M NLE+LE+ FS+LS K L  ICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Subjt:  IAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI

Q9M096 Putative F-box/LRR-repeat protein 192.0e-7352.17Show/hide
Query:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDL
        W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P E   WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL  
Subjt:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDL

Query:  VAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIA
         A+ CPNLEVL IK+C NVTD SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + P +YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIA

Query:  KFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER
        K+M  L++LE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L++L EI KP+F  P +V    R
Subjt:  KFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER

Q9M0U6 Putative F-box/LRR-repeat protein 228.6e-1628.57Show/hide
Query:  EPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLE--KRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI---R
        +PS WAEL  + L++IL RL+  +       VC+ W R + DP ++   D+   +R                   +++  R  V  S G L    I   R
Subjt:  EPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLE--KRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI---R

Query:  HCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKR-NFFNNLDPSQHKGIVPDNYLDARPQ
          + S L+ +A+   NL  L +K    +T   + +       L E+++ YC  I       IG+ CPN+KTLK   F+++L+ S                
Subjt:  HCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKR-NFFNNLDPSQHKGIVPDNYLDARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL
          D++A AIA  M  L +L+L  + L+   L  I +GCP+L+ LDL  C N+
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL

Q9M0U8 Putative F-box/LRR-repeat protein 215.4e-1829.25Show/hide
Query:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RH
        M E   W +L  E  T+IL RL++         VCK W R   DPS++   +                   +     SM R  V  S G L  I +    
Subjt:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RH

Query:  CSDSSLDLVAQGCPNLEVLSIKSC-ANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYL-DARPQ
         SDS L  +     NL  L +  C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L P+  K     N L D  P 
Subjt:  CSDSSLDLVAQGCPNLEVLSIKSC-ANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYL-DARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT
        + D +A AIA+ M  L +L+L  ++L+   L  I +GCP+L++LD+  C  ++
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT

Q9S9V8 Putative F-box/LRR-repeat protein 94.7e-2231.28Show/hide
Query:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LD
        WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  + E+       +++      I+ +   AV  S G L  I I +  ++S L+
Subjt:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LD

Query:  LVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAI
         +A    NL  L +  CA V  R + + A     L E+DI+Y   I    L ++G+ CPN++TLK N   ++                  +  D  A AI
Subjt:  LVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAI

Query:  AKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL
        A+ M  L +L+L  + LS   L  I EGCP+LK L L  C+N+
Subjt:  AKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL

Arabidopsis top hitse value%identityAlignment
AT4G05470.1 RNI-like superfamily protein3.8e-1929.25Show/hide
Query:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RH
        M E   W +L  E  T+IL RL++         VCK W R   DPS++   +                   +     SM R  V  S G L  I +    
Subjt:  MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RH

Query:  CSDSSLDLVAQGCPNLEVLSIKSC-ANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYL-DARPQ
         SDS L  +     NL  L +  C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L P+  K     N L D  P 
Subjt:  CSDSSLDLVAQGCPNLEVLSIKSC-ANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYL-DARPQ

Query:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT
        + D +A AIA+ M  L +L+L  ++L+   L  I +GCP+L++LD+  C  ++
Subjt:  DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT

AT4G05497.1 RNI-like superfamily protein3.3e-2331.28Show/hide
Query:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LD
        WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  + E+       +++      I+ +   AV  S G L  I I +  ++S L+
Subjt:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LD

Query:  LVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAI
         +A    NL  L +  CA V  R + + A     L E+DI+Y   I    L ++G+ CPN++TLK N   ++                  +  D  A AI
Subjt:  LVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAI

Query:  AKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL
        A+ M  L +L+L  + LS   L  I EGCP+LK L L  C+N+
Subjt:  AKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein1.4e-7452.17Show/hide
Query:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDL
        W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P E   WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL  
Subjt:  WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDL

Query:  VAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIA
         A+ CPNLEVL IK+C NVTD SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + P +YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIA

Query:  KFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER
        K+M  L++LE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L++L EI KP+F  P +V    R
Subjt:  KFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER

AT5G52480.1 RNI-like superfamily protein5.7e-1533.71Show/hide
Query:  DSMLRSAVRWSLGSLSVIRIRHC-SDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRN--F
        +++ R+AV  S G L  I I    SDS L  +A+   NL  L +  C+ +TD    +       L E+++S    +S  S+ L G  CPN+KTL  N  F
Subjt:  DSMLRSAVRWSLGSLSVIRIRHC-SDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRN--F

Query:  FNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL
        + + D                  D D +A AIA+ M  L +L+L  +KL+   L  I +GCP+L++LDL  C+NL
Subjt:  FNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL

AT5G57900.1 SKP1 interacting partner 11.5e-9257.72Show/hide
Query:  SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSL
        S W  L  E L NI+SRLT+++ W GPM V K W     DP L+S FDLE  F+S P E    W PEFE K+D MLRS V WS G L+ IR+RHCSD +L
Subjt:  SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSL

Query:  DLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAA
           A  CPNL+VL+I+S  NVTD SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H G VP  YLDA PQD D+EA A
Subjt:  DLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAA

Query:  IAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI
        I K M NLE+LE+ FS+LS K L  ICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Subjt:  IAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCCGTCACCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACA
CTGGTTCCGTGCCGCCACGGATCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCCTCCGGCCTGGTGGTTGCCGGAGTTCGAGA
CCAAAATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGA
TGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTA
CTGTCACGAAATCTCAAACGTGTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGG
GAATTGTCCCTGACAATTATCTAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCT
AAACTATCAGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTAC
ATCAAGTTTGGAGCATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAA
CTGATATTTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
CGTAGTTGAAAATGGTTTTTGCAACTTTTTCGATTAAGAAAAGGGTCGGTTGAGACTATCTCCATTCTCACGCCAAATGATCGGATTGCGCTTTTGCTTCTACTCCGCGC
ATCTCAACGAAAACTCCAAACGAAAAGAAAAATAAAAACCTCTATTTCCTTTCTTCATTCCTAAATTTATTTCTAAGGTCACCCAAAAAATGGCGGAGCCGTCACCATGG
GCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACACTGGTTCCGTGCCGCCACGGA
TCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAAATTGATTCCATGCTCC
GATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGATGCCCAAACCTTGAGGTTCTT
TCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCAAACGT
GTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGGGAATTGTCCCTGACAATTATC
TAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCTAAACTATCAGCTAAAGCTCTA
ACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTACATCAAGTTTGGAGCATTTGGA
GATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCCGAATTTGAT
GATTCTGCAAGTGCACTTTTAATACTATATGTATAGCTGCACTTAGAAACCAAGTTTAATGTTGCTTTCCTAAGTTGTACAGTTTTTAATTTACCTGTTCTGTTTTATGA
CAGTTACAAGTCTGTATTATATTTGTAACTTGTATGGTGGACTGATGTGGCACAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTTCACCCTGTACATCTC
TAATCTCTTAATATGCTAATGATGGGACAATTCACATGATATTACAACATTTAGAAAATTAATTTCTAAATATGTAGTCACCAGGG
Protein sequenceShow/hide protein sequence
MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQG
CPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFS
KLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI