; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G05270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G05270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslation initiation factor IF-3
Genome locationChr2:3739969..3743100
RNA-Seq ExpressionCSPI02G05270
SyntenyCSPI02G05270
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]1.4e-151100Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]1.0e-13893.33Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPP
        MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPP
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPP

Query:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        DSKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
Subjt:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
        IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]3.8e-12282.94Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGL+  FPFK LLSQSSA    T+SS+AA   +S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+ GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV

XP_023547209.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.6e-11579.67Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSG FPFKS+ SQSSA AT T+S        SSSS TPFRTS   LP+ SS SNAF+FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS D + LD+S+I+S NVRLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY I
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV
        DQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVN VSA+V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]5.2e-12786.67Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSG FPFK LLSQS+  ATTTS+++A    TSSSS TPFRTS   LP+SSS +NAFKFRL KSNSLRL+ S PVSSPIRTSVF+R GGAPRSSGP D
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+DE GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNGVSASV
        DQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVN VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNGVSASV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-36.5e-152100Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV

A0A1S3BV82 Translation initiation factor IF-34.9e-13993.33Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPP
        MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPP
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPP

Query:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        DSKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
Subjt:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
        IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV

A0A6J1DYM5 Translation initiation factor IF-31.9e-12282.94Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGL+  FPFK LLSQSSA    T+SS+AA   +S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D+ GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV

A0A6J1G3Y5 Translation initiation factor IF-39.9e-11679.67Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSG FPFKS+ SQSSA AT T+++S      SSSS TPFRTS   LP+ SS SNAF+FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS D + LD+S+I+S NVRLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY I
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV
        DQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVN VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV

A0A6J1KDY9 Translation initiation factor IF-31.1e-11479.33Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSG FPFKS+ SQSSA AT T+S        SSSS TPFRTS   LP  SS SNA +FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS D + LD+S+I+S NVRLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY I
Subjt:  SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV
        DQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVN VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV

SwissProt top hitse value%identityAlignment
A5GI06 Translation initiation factor IF-33.6e-3043.5Show/hide
Query:  VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDG
        +R++DA+   +GV+ + +A+++A++ ELDLV+VS  ADPPV RIMDY KY++E +KK +  +KKS  T  ++KE+KM Y IDQHDY VR+  A++FLK G
Subjt:  VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDG

Query:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGV
        DKVK  V  +GRE +   +A  L+RR  +++ E A  +    R+ RN+ + L P K  L K  +    K++PA   V
Subjt:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGV

B0JKQ1 Translation initiation factor IF-35.5e-3140.91Show/hide
Query:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  ++      I+   +R+ID++ + +G+++ A+A+++AE+ ELDLV+VS  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic4.5e-7359.27Show/hide
Query:  SSSTTPFRTSFPSLPISSSNSNAF----KFRLHKSNSLRLLFSSPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EIGLDISAIKSINVRLID
        +SST  F   F  +  + S+ + F    K    + +   L F++   SP R    T  F   GG  R SG     R  +   +  LDIS+I+S  VRLID
Subjt:  SSSTTPFRTSFPSLPISSSNSNAF----KFRLHKSNSLRLLFSSPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EIGLDISAIKSINVRLID

Query:  AEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV
         +QNM+G+VSK +A++MA+DAELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKV
Subjt:  AEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV

Query:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNGVSAS
        IV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A N  SAS
Subjt:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNGVSAS

Q0IDZ5 Translation initiation factor IF-32.7e-3045.14Show/hide
Query:  VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDG
        +R++DA+   +GV+ + QA+++A + ELDLV+VS  ADPPV RIMDY K+++E +KK +  +KKS  T  ++KE+KM Y IDQHDY VR+  A++FLK G
Subjt:  VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDG

Query:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVN
        DKVK  V  +GRE +   +A  L+RR  +++ E A  +    R+ RN+ + L P KA L K     K KD+  VN
Subjt:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVN

Q94B52 Translation initiation factor IF3-4, chloroplastic8.7e-7771.96Show/hide
Query:  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LDISAI+S  VRLID +QNM+G+VSK +A++ AEDAELDLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNGVSAS
        KKK KPA + VSA+
Subjt:  KKKDKPAVNGVSAS

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein1.8e-0831.41Show/hide
Query:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMG
        D  R N++I  D        VRL+  E +   VVS  +A++ A++ + DLV V  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++  
Subjt:  DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAAKKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
          I+  D   +   A K ++ G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V +         PPKK
Subjt:  YNIDQHDYSVRLKAAKKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein3.2e-7459.27Show/hide
Query:  SSSTTPFRTSFPSLPISSSNSNAF----KFRLHKSNSLRLLFSSPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EIGLDISAIKSINVRLID
        +SST  F   F  +  + S+ + F    K    + +   L F++   SP R    T  F   GG  R SG     R  +   +  LDIS+I+S  VRLID
Subjt:  SSSTTPFRTSFPSLPISSSNSNAF----KFRLHKSNSLRLLFSSPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EIGLDISAIKSINVRLID

Query:  AEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV
         +QNM+G+VSK +A++MA+DAELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKV
Subjt:  AEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV

Query:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNGVSAS
        IV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A N  SAS
Subjt:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNGVSAS

AT4G30690.1 Translation initiation factor 3 protein6.2e-7871.96Show/hide
Query:  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LDISAI+S  VRLID +QNM+G+VSK +A++ AEDAELDLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNGVSAS
        KKK KPA + VSA+
Subjt:  KKKDKPAVNGVSAS

AT4G30690.2 Translation initiation factor 3 protein6.2e-6261.21Show/hide
Query:  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LDISAI+S  VRLID +QNM+G+VSK +A++ AEDAELDLV++SPDADPPVVR+MDY+                  
Subjt:  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
                    YNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  KKKDKPAVNGVSAS
        KKK KPA + VSA+
Subjt:  KKKDKPAVNGVSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCTCCTCCTCCTCCGCCGCACCTCCCCCAACCTCCTCCTC
TTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCTTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTT
CCTCTCCCGTTTCCTCTCCTATTCGTACTTCTGTATTTGCTCGACTCGGCGGCGCTCCTCGATCTTCTGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTC
GATATTTCCGCCATCAAGTCAATTAATGTGAGGCTTATCGATGCTGAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGATGCTGAACT
TGATTTGGTTGTAGTATCCCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAA
GTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCGAAGAAATTTTTAAAAGACGGTGAC
AAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGA
GGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATG
GAGTTTCTGCCAGTGTTTAG
mRNA sequenceShow/hide mRNA sequence
AGGAATATAGAGTTAGAGTGATGAGTCGACTCCAAAACTCAAAAACTATTGTGGATAAGATTTTTCCTTTTCTTTTTTCTTAAAAATTAATTAAAAAAGAATCCCCAAAC
TCCCTCCCACCACTGCCCCCTCCACAGCTCAAAGCTATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCTC
CTCCTCCTCCGCCGCACCTCCCCCAACCTCCTCCTCTTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCTTTCAAATTCC
GCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCTCTCCCGTTTCCTCTCCTATTCGTACTTCTGTATTTGCTCGACTCGGCGGCGCTCCTCGATCTTCTGGACCG
CCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATCAAGTCAATTAATGTGAGGCTTATCGATGCTGAACAGAATATGGTTGGAGTTGTGTCGAA
GGCCCAAGCCATTCAAATGGCTGAAGATGCTGAACTTGATTTGGTTGTAGTATCCCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATG
AACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGT
TTGAAAGCTGCGAAGAAATTTTTAAAAGACGGTGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACG
TTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAG
AACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGGAGTTTCTGCCAGTGTTTAGTCAAGCTTTCGCCAAAAATAGATGGGTTAGTTGCAACATTCTAAATCTTCTTCT
ACCATAGAGAAAATTTGAGAGATTAAATGTATAATGTTTTTGTTTAATCTTATGCATCAAACTGTTGTTCGTTCTATTTTTTTAGTGGAATGTTTAGAAATCAGATGTGT
TACTAATTCTTTAGAAAACATCAATTCATATAACCATCCTTTGCT
Protein sequenceShow/hide protein sequence
MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGL
DISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGD
KVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV