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CSPI02G05470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G05470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCytochrome c oxidase subunit
Genome locationChr2:3932719..3937338
RNA-Seq ExpressionCSPI02G05470
SyntenyCSPI02G05470
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144709.1 cytochrome c oxidase subunit 6b-2 [Cucumis sativus]7.3e-41100Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

XP_008452371.1 PREDICTED: cytochrome c oxidase subunit 6b-2 [Cucumis melo]2.1e-4098.7Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

XP_022929560.1 cytochrome c oxidase subunit 6b-2 [Cucurbita moschata]5.2e-3996.1Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        M EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWV+KWNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

XP_038889174.1 cytochrome c oxidase subunit 6b-2 isoform X1 [Benincasa hispida]8.9e-3997.33Show/hide
Query:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
Subjt:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

XP_038889175.1 cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida]1.8e-3997.4Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        M EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

TrEMBL top hitse value%identityAlignment
A0A0A0LH49 Cytochrome c oxidase subunit3.5e-41100Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

A0A1S3BUT2 Cytochrome c oxidase subunit1.0e-4098.7Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

A0A6J1EUQ5 Cytochrome c oxidase subunit2.5e-3996.1Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        M EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWV+KWNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

A0A6J1I3B0 Cytochrome c oxidase subunit5.7e-3994.81Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        M EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWV+KWN+QRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

A0A6J1K554 Cytochrome c oxidase subunit5.7e-3994.81Show/hide
Query:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        M EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLT KGEESGECERFAKYYRALCPGEWV++WNEQRENGTFPGPL
Subjt:  MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial1.1e-2055.71Show/hide
Query:  TAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        T   D RFP TNQT+HCF  YI++ RC+  KGE+   C++F   Y++LCP EWV++W+EQRENGTFP P+
Subjt:  TAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

P14854 Cytochrome c oxidase subunit 6B12.4e-1851.35Show/hide
Query:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        KTAP D RFP  NQTR+C+  Y++FHRC   +T KG +   CE + + Y++LCP  WV  W+EQR  GTFPG +
Subjt:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

Q945L0 Cytochrome c oxidase subunit 6b-21.7e-4093.42Show/hide
Query:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRC T KGEES +CERFAKYYRALCPGEWVDKWNEQRE+GTFPGPL
Subjt:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

Q9S7L9 Cytochrome c oxidase subunit 6b-17.4e-3677.63Show/hide
Query:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        DEI+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+  KG+++ EC++FAK+YR+LCP EWVD+WNEQRENGTFPGPL
Subjt:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

Q9SUD3 Cytochrome c oxidase subunit 6b-34.9e-4092.11Show/hide
Query:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRC T KGE++ ECERFAKYYRALCPGEWVDKWNEQRE GTFPGPL
Subjt:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B5.2e-3777.63Show/hide
Query:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        DEI+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+  KG+++ EC++FAK+YR+LCP EWVD+WNEQRENGTFPGPL
Subjt:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein7.6e-1239.68Show/hide
Query:  APADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDK-WNEQREN
        A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V K W +   N
Subjt:  APADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDK-WNEQREN

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein3.5e-4192.11Show/hide
Query:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRC T KGE++ ECERFAKYYRALCPGEWVDKWNEQRE GTFPGPL
Subjt:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein1.2e-4193.42Show/hide
Query:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL
        DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRC T KGEES +CERFAKYYRALCPGEWVDKWNEQRE+GTFPGPL
Subjt:  DEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGATTGAACTGAAAACAGCACCTGCTGACTTCCGATTCCCTACTACAAATCAAACTAGGCACTGTTTCACTCGTTACATCGAGTTCCACAGGTGCCTGACAGT
AAAGGGTGAGGAGTCTGGTGAATGTGAAAGATTTGCAAAGTACTATCGTGCTCTTTGCCCTGGTGAATGGGTCGACAAATGGAATGAGCAGAGGGAGAACGGTACTTTCC
CTGGTCCTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ACATCTTCTTCGTTCAACTTAAACTGCGCCTTCCTCTACGTTGCATTACAGAGTCTTCCATTTGATCTCCAAAATTTCTAGGACCTTCAATCCGATCAGTCATGGACGAG
ATTGAACTGAAAACAGCACCTGCTGACTTCCGATTCCCTACTACAAATCAAACTAGGCACTGTTTCACTCGTTACATCGAGTTCCACAGGTGCCTGACAGTAAAGGGTGA
GGAGTCTGGTGAATGTGAAAGATTTGCAAAGTACTATCGTGCTCTTTGCCCTGGTGAATGGGTCGACAAATGGAATGAGCAGAGGGAGAACGGTACTTTCCCTGGTCCTC
TCTGAACTTGTTCATCACCGGGAAAGCACAGATTGTTAATTTATGTTTGTTCTCAAGTTTTATCAAAAAACTGTTTGGGAGTTCCATTATTTTTCATTGCCATCTTCTCA
GAGAATAATAAAGGATAGCCATTTTGTTTCGTGTCTTCTTGAGTAGTTATAACTCAATTGTTGATTGTGGATAAGCTGAATGGATCCCAAAATGCACCTTACCATTTCTC
TACCCTTTCTTGTCCATTCGACTCCCGTTTGATTTGTTTTCAATCTTCTGTGTAATTAGATCTTTAAACCAACTTAATTTGCTCCATTTGTTGTTGACTTCTAAAGAAAG
TTTCTTGTAATTTTAGTATATAACAGATGAAAGCAACGATGGATGGGCTCCAAACTGGATGGCCTAAGAG
Protein sequenceShow/hide protein sequence
MDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTVKGEESGECERFAKYYRALCPGEWVDKWNEQRENGTFPGPL