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CSPI02G05830 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G05830
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDUF4283 domain-containing protein
Genome locationChr2:4289047..4290056
RNA-Seq ExpressionCSPI02G05830
SyntenyCSPI02G05830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034016.1 hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa]3.4e-5446.58Show/hide
Query:  DIKSRLNVDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL---------
        D  S + ++N +V+ RRFFHDDW KIL N  +Q  E F+Y  FH++K LVHF     A LLC+NKGW+TVG + V+FE W+P+SHA  +L+         
Subjt:  DIKSRLNVDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL---------

Query:  ------------FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEF
                    FQ         ++VA ETK   NLIEAK+K++YNY GF+PAY++I D  GN F +Q+++H++GKWL+ERNVR HGTFK QA  SF EF
Subjt:  ------------FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEF

Query:  NPNAKQFTFIGSEGLPPKHP-TSSKNKKCVAKKQ
        NP+++QF F G E + P  P T S ++K  + +Q
Subjt:  NPNAKQFTFIGSEGLPPKHP-TSSKNKKCVAKKQ

KAA0039309.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.5e-5347.14Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW KIL N  +Q  E F+Y  FH++KVLVHF     A LLC+NKGW+TVG + V+FE W+P+SHA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ETK   NLIEAK+K++YNY GF+PAY++I D  GN F +Q+V+H++GKWL+ERNVR HGTFK QA  SF +FNP+++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ
         F G E + P    T S ++K ++ +Q
Subjt:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.2e-5148.42Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW+KIL N  +Q  E F+Y  FH++K LVHF     A LLC+NKGWSTVG + V+FE WSP  HA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ET+   NLIEA++KV+YNY GF+PA +RI D+ GN F +Q+V+H +GKWL+ERNVR HGTFK QA  SF +FNP ++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPKH-PTSSKNKK
         F GSE + P    TSS  +K
Subjt:  TFIGSEGLPPKH-PTSSKNKK

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.5e-5347.14Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW KIL N  +Q  E F+Y  FH++KVLVHF     A LLC+NKGW+TVG + V+FE W+P+SHA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ETK   NLIEAK+K++YNY GF+PAY++I D  GN F +Q+V+H++GKWL+ERNVR HGTFK QA  SF +FNP+++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ
         F G E + P    T S ++K ++ +Q
Subjt:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ

TYK23598.1 hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa]1.0e-5047.51Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW+KIL N  +Q  E F+Y  FH++K LVHF     A LLC+NKGW+TVG + V+FE WS + HA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ETK   NLIEA++KV+YNY GF+PA +RI D+ GN F IQ+V+H +GKWL+ERNVR HGTFK QA  +F +FNP ++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPKH-PTSSKNKK
         F G E + P    TSS ++K
Subjt:  TFIGSEGLPPKH-PTSSKNKK

TrEMBL top hitse value%identityAlignment
A0A5A7SVM5 DUF4283 domain-containing protein1.7e-5446.58Show/hide
Query:  DIKSRLNVDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL---------
        D  S + ++N +V+ RRFFHDDW KIL N  +Q  E F+Y  FH++K LVHF     A LLC+NKGW+TVG + V+FE W+P+SHA  +L+         
Subjt:  DIKSRLNVDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL---------

Query:  ------------FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEF
                    FQ         ++VA ETK   NLIEAK+K++YNY GF+PAY++I D  GN F +Q+++H++GKWL+ERNVR HGTFK QA  SF EF
Subjt:  ------------FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEF

Query:  NPNAKQFTFIGSEGLPPKHP-TSSKNKKCVAKKQ
        NP+++QF F G E + P  P T S ++K  + +Q
Subjt:  NPNAKQFTFIGSEGLPPKHP-TSSKNKKCVAKKQ

A0A5A7TDG1 LINE-1 retrotransposable element ORF2 protein3.1e-5347.14Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW KIL N  +Q  E F+Y  FH++KVLVHF     A LLC+NKGW+TVG + V+FE W+P+SHA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ETK   NLIEAK+K++YNY GF+PAY++I D  GN F +Q+V+H++GKWL+ERNVR HGTFK QA  SF +FNP+++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ
         F G E + P    T S ++K ++ +Q
Subjt:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein3.1e-5347.14Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW KIL N  +Q  E F+Y  FH++KVLVHF     A LLC+NKGW+TVG + V+FE W+P+SHA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ETK   NLIEAK+K++YNY GF+PAY++I D  GN F +Q+V+H++GKWL+ERNVR HGTFK QA  SF +FNP+++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ
         F G E + P    T S ++K ++ +Q
Subjt:  TFIGSEGLPPK-HPTSSKNKKCVAKKQ

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein5.9e-5248.42Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW+KIL N  +Q  E F+Y  FH++K LVHF     A LLC+NKGWSTVG + V+FE WSP  HA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ET+   NLIEA++KV+YNY GF+PA +RI D+ GN F +Q+V+H +GKWL+ERNVR HGTFK QA  SF +FNP ++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPKH-PTSSKNKK
         F GSE + P    TSS  +K
Subjt:  TFIGSEGLPPKH-PTSSKNKK

A0A5D3DJE1 DUF4283 domain-containing protein5.0e-5147.51Show/hide
Query:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------
        ++N +V+ RRFFHDDW+KIL N  +Q  E F+Y  FH++K LVHF     A LLC+NKGW+TVG + V+FE WS + HA  +L+                
Subjt:  VDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLL----------------

Query:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF
             FQ         ++VA ETK   NLIEA++KV+YNY GF+PA +RI D+ GN F IQ+V+H +GKWL+ERNVR HGTFK QA  +F +FNP ++QF
Subjt:  -----FQ--------AMEVASETKLGLNLIEAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQF

Query:  TFIGSEGLPPKH-PTSSKNKK
         F G E + P    TSS ++K
Subjt:  TFIGSEGLPPKH-PTSSKNKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACATCAAGAGCCGTTTGAATGTGGACAATGTTTTAGTAGTTACCCGACGCTTCTTTCATGACGATTGGAACAAAATTCTAAGCAATCAATGGGAACAACTTAA
TGAAGGTTTTTCTTATAAACCCTTTCATTCCGACAAAGTCCTTGTGCACTTTCAAGAACCCGATATAGCAAAGCTTCTCTGTAGAAATAAAGGCTGGTCAACCGTTGGAA
ATTTCTTTGTCAAATTTGAAATGTGGTCCCCTTCATCCCATGCAGGACGGAGGCTCTTATTCCAAGCTATGGAGGTGGCATCTGAAACGAAACTGGGTCTAAACCTGATT
GAAGCTAAAGTAAAAGTTAAATATAATTACCCAGGCTTCGTTCCGGCATACATTCGTATTACAGATGACTTGGGTAACAGCTTTCCTATTCAAATTGTATCTCACACTCA
AGGCAAATGGTTGGTAGAAAGAAACGTGAGGAAGCATGGGACCTTTAAATCTCAAGCTACCACTAGTTTTGGTGAATTCAATCCAAATGCAAAACAATTTACGTTCATCG
GTAGCGAAGGTCTGCCACCGAAACATCCAACTTCGAGCAAGAATAAGAAATGTGTTGCAAAAAAGCAATTATGCGTGAGCACAACCTTCACTGATGCAGAGAAGCATGTC
GATGCAGGCGTCGTAAATGACGCGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACATCAAGAGCCGTTTGAATGTGGACAATGTTTTAGTAGTTACCCGACGCTTCTTTCATGACGATTGGAACAAAATTCTAAGCAATCAATGGGAACAACTTAA
TGAAGGTTTTTCTTATAAACCCTTTCATTCCGACAAAGTCCTTGTGCACTTTCAAGAACCCGATATAGCAAAGCTTCTCTGTAGAAATAAAGGCTGGTCAACCGTTGGAA
ATTTCTTTGTCAAATTTGAAATGTGGTCCCCTTCATCCCATGCAGGACGGAGGCTCTTATTCCAAGCTATGGAGGTGGCATCTGAAACGAAACTGGGTCTAAACCTGATT
GAAGCTAAAGTAAAAGTTAAATATAATTACCCAGGCTTCGTTCCGGCATACATTCGTATTACAGATGACTTGGGTAACAGCTTTCCTATTCAAATTGTATCTCACACTCA
AGGCAAATGGTTGGTAGAAAGAAACGTGAGGAAGCATGGGACCTTTAAATCTCAAGCTACCACTAGTTTTGGTGAATTCAATCCAAATGCAAAACAATTTACGTTCATCG
GTAGCGAAGGTCTGCCACCGAAACATCCAACTTCGAGCAAGAATAAGAAATGTGTTGCAAAAAAGCAATTATGCGTGAGCACAACCTTCACTGATGCAGAGAAGCATGTC
GATGCAGGCGTCGTAAATGACGCGTTGTAA
Protein sequenceShow/hide protein sequence
MVDIKSRLNVDNVLVVTRRFFHDDWNKILSNQWEQLNEGFSYKPFHSDKVLVHFQEPDIAKLLCRNKGWSTVGNFFVKFEMWSPSSHAGRRLLFQAMEVASETKLGLNLI
EAKVKVKYNYPGFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGTFKSQATTSFGEFNPNAKQFTFIGSEGLPPKHPTSSKNKKCVAKKQLCVSTTFTDAEKHV
DAGVVNDAL