; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G05860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G05860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal protein L23
Genome locationChr2:4319424..4319767
RNA-Seq ExpressionCSPI02G05860
SyntenyCSPI02G05860
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1210637.1 hypothetical protein CJ030_MR6G010321 [Morella rubra]2.7e-3694.81Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCY+RLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
KAE8651661.1 hypothetical protein Csa_021339 [Cucumis sativus]8.7e-4398.84Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS
        MTNGSS RDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS
PWA76046.1 hypothetical protein CTI12_AA236480 [Artemisia annua]2.7e-3694.81Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCY+RLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
TXG46680.1 hypothetical protein EZV62_027835 [Acer yangbiense]9.3e-3796.1Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
TXG59590.1 hypothetical protein EZV62_014163 [Acer yangbiense]9.3e-3796.1Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
TrEMBL top hitse value%identityAlignment
A0A0A0LGR1 Uncharacterized protein2.1e-4296.51Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS
        MTNGSS RDL+LNSQNFCRSIPAGAENPSLSRLCY+RLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS
A0A2N9HQ72 Uncharacterized protein1.3e-3694.81Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCY+RLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
A0A5C7GQ25 Uncharacterized protein4.5e-3796.1Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
A0A5C7HRI9 Uncharacterized protein4.5e-3796.1Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
A0A6B9QQT2 Ribosomal protein L231.3e-3694.81Show/hide
Query:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
        M NGSS RDL+LNSQNFCRSIPAGAENPSLSRLCY+RLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
Subjt:  MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACGGCTCATCTGGCCGTGACCTTATCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCTGGGGCGGAGAACCCATCGCTGTCTCGGCTGTGCTATCAGAG
GCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGC
ACGATAACTGGTTGAAGATTGCAATAGAAAATGTCTCATGA
mRNA sequenceShow/hide mRNA sequence
GTGATGACAAACGGCTCATCTGGCCGTGACCTTATCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCTGGGGCGGAGAACCCATCGCTGTCTCGGCTGTGCTATCA
GAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTG
GGCACGATAACTGGTTGAAGATTGCAATAGAAAATGTCTCATGA
Protein sequenceShow/hide protein sequence
MTNGSSGRDLILNSQNFCRSIPAGAENPSLSRLCYQRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWLKIAIENVS