CuGenDBv2

Gene ID	CSPI02G06190
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transcription factor bHLH146-like
Genome location	Chr2:4761953..4762697
RNA-Seq Expression	CSPI02G06190
Synteny	CSPI02G06190
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011648935.1 transcription factor bHLH146 [Cucumis sativus]

5.4e-90

96.3

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF
        MVRKMVRKGRRVFSIEP+KVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVL    GNGNENGFDF
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF

Query:  SVQAVKKTSQENLGNEEEDHHH-EEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        SVQ VKKTSQENLGNEEEDHHH EEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  SVQAVKKTSQENLGNEEEDHHH-EEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

XP_016901419.1 PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]

1.8e-80

87.18

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNGNGNENGF
        MVRK+VRKGRRVFSIEPNKVAYTMF RNYVKHLMTSLVKISHQQQQQNF+KLV+FEVDMAMAQSASEFSWGIALKKKLLQRD  Q+VL    GNG+ENGF
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNGNGNENGF

Query:  DFSVQAVKKTSQENLGNEEEDHH----HEEEEEEEEMENGLMKLRKIIPGGDNFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        DFS+Q +KK S +NLGNEEEDHH     EEEEEEEEMENGLMKLRKIIPGGD+FSIGG NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  DFSVQAVKKTSQENLGNEEEDHH----HEEEEEEEEMENGLMKLRKIIPGGDNFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]

2.0e-52

67.72

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG
        M R+++RK +RV S+EPNK+AYTMF RNYVK+LMTSL KISH   Q Q+QNF+KLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+       +GNG+ NG
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG

Query:  FDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        F  S+Q V K S+ENL  E+E+H   EE EE ++ENGLMKLRKI+PGG N    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  FDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]

1.3e-51

68.25

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG
        M R+++RK +RV S+EPNK+AYTMF RNYVK+LMTSL KISH   Q Q+QNF+KLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+       +GNG+ NG
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG

Query:  FDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        F FS+Q V K SQENL  E E+H   EE +E ++ENGLMKLRKI+PGG N    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  FDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_038877916.1 transcription factor bHLH146-like [Benincasa hispida]

1.7e-59

74.36

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Query:  MVRKMVRKG-RRVFSIEPNKVAYTMFERNYVKHLMTSLVKIS------HQQQQQNFRKLVKFEVDMAMAQSAS-EFSWGIALKKKLLQRDQQVLGNGNGN
        M R++VRKG RRVFS+EPNKVAYTMF RNYVKHLMTSLVKIS      HQQQ+QNF+K VKFEVDMAMAQSAS +F+WGIALKKKLLQRDQ         
Subjt:  MVRKMVRKG-RRVFSIEPNKVAYTMFERNYVKHLMTSLVKIS------HQQQQQNFRKLVKFEVDMAMAQSAS-EFSWGIALKKKLLQRDQQVLGNGNGN

Query:  GNENGFDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTF
        GNEN FDFS+Q V K SQENLG EEE    EE EEE++ME+GLMKLRKIIPGG +F+I     E+DDLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  GNENGFDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJA7 Uncharacterized protein

2.6e-90

96.3

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF
        MVRKMVRKGRRVFSIEP+KVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVL    GNGNENGFDF
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF

Query:  SVQAVKKTSQENLGNEEEDHHH-EEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        SVQ VKKTSQENLGNEEEDHHH EEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  SVQAVKKTSQENLGNEEEDHHH-EEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

A0A1S4DZN3 uncharacterized protein At4g30180

8.5e-81

87.18

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNGNGNENGF
        MVRK+VRKGRRVFSIEPNKVAYTMF RNYVKHLMTSLVKISHQQQQQNF+KLV+FEVDMAMAQSASEFSWGIALKKKLLQRD  Q+VL    GNG+ENGF
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNGNGNENGF

Query:  DFSVQAVKKTSQENLGNEEEDHH----HEEEEEEEEMENGLMKLRKIIPGGDNFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        DFS+Q +KK S +NLGNEEEDHH     EEEEEEEEMENGLMKLRKIIPGGD+FSIGG NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  DFSVQAVKKTSQENLGNEEEDHH----HEEEEEEEEMENGLMKLRKIIPGGDNFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

A0A6J1DIU0 transcription factor bHLH146

2.8e-47

63.1

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF
        M R++VRK RRVFS+EPNK+ Y MF RNY K+LM SL KIS     QN +K+VKFEVDMAMA SASEF+WG ALK+KLLQ+ +    NGNGNG  N FDF
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF

Query:  SVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFS-IGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        S+Q +K         E+E+   EEEE++++MENGL+KLRKI+PGG+N +   G+L EEDDLLKQTESY+KCLELQVNVLR LV+TNT
Subjt:  SVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFS-IGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1FJ33 transcription factor bHLH146-like

9.8e-53

67.72

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG
        M R+++RK +RV S+EPNK+AYTMF RNYVK+LMTSL KISH   Q Q+QNF+KLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+       +GNG+ NG
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG

Query:  FDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        F  S+Q V K S+ENL  E+E+H   EE EE ++ENGLMKLRKI+PGG N    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  FDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1I0E6 transcription factor bHLH146-like

3.5e-50

67.19

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG
        M R+++RK +RV S+EP+K+AYTMF RNYVK+LMTSL KISH   Q QQQNF+KLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+       + NG+ NG
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENG

Query:  FDFSVQAVKKTSQENLGNEEEDH-HHEEEEEEEE--MENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        F FS+    K S+ENL  E+E+H  HEE EE EE  +ENGLMKLRKI+PGG N    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  FDFSVQAVKKTSQENLGNEEEDH-HHEEEEEEEE--MENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

SwissProt top hits

e value

%identity

Alignment

Q9SUM5 Transcription factor bHLH146

7.0e-16

30.65

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF
        M R+++ + +RVFS+EPNK    +F R Y  HL+ +L K++    + + ++ VK EVDMA+A SA EF+W   L +KL         + N     +    
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF

Query:  SVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         ++ +++  +E  GNEE             +E  L +L+K++PGG+  ++       +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  SVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors

2.8e-20

34.55

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKI-----SHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNE
        M R+++ K +RVFS++PNK    +F R YV HL+ +L KI     S +  +Q+  + VK EVDMA A SA EF+W   L++KLL        + + + +E
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKI-----SHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNE

Query:  NGFDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
                 ++++S+   G + +D   +EEEE  E++  L +L+K++PGG+  ++       +++L +  SY+ CLELQ+ VL+ +V+ NT
Subjt:  NGFDFSVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

5.0e-17

30.65

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Query:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF
        M R+++ + +RVFS+EPNK    +F R Y  HL+ +L K++    + + ++ VK EVDMA+A SA EF+W   L +KL         + N     +    
Subjt:  MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDF

Query:  SVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         ++ +++  +E  GNEE             +E  L +L+K++PGG+  ++       +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  SVQAVKKTSQENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTAAGGAAAATGGTGAGGAAAGGAAGAAGGGTATTTTCCATAGAACCAAACAAAGTTGCATACACCATGTTTGAAAGAAACTACGTGAAACATTTGATGACATCTTT
AGTCAAAATTTCTCATCAACAACAACAACAAAATTTTCGGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCAATCAGCAAGTGAATTTAGTTGGGGAATTGCTC
TAAAAAAGAAGCTTCTTCAAAGAGATCAACAAGTCCTTGGCAATGGCAATGGCAATGGCAATGAAAATGGTTTTGACTTTTCTGTTCAAGCAGTGAAGAAAACTTCTCAA
GAAAATTTAGGAAATGAAGAAGAAGATCATCATCATGAGGAAGAAGAAGAAGAGGAAGAAATGGAAAATGGGTTGATGAAGCTGAGGAAAATTATTCCAGGTGGTGATAA
TTTTAGTATTGGAGGTAATTTGGATGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTCAATGTTCTTAGAGGTTTGGTTGAAA
CAAACACTTTTTTTTAA

mRNA sequence

Show/hide mRNA sequence

GTAACATAACAAGAGAGTACTCCTTATTCTCTTCTCCAAAACCCATCAATATAGTTTTTCTTTAATTTCTTGCTATTTCTTCAAATTTTGTGTGAAGAAATGGTAAGGAA
AATGGTGAGGAAAGGAAGAAGGGTATTTTCCATAGAACCAAACAAAGTTGCATACACCATGTTTGAAAGAAACTACGTGAAACATTTGATGACATCTTTAGTCAAAATTT
CTCATCAACAACAACAACAAAATTTTCGGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCAATCAGCAAGTGAATTTAGTTGGGGAATTGCTCTAAAAAAGAAG
CTTCTTCAAAGAGATCAACAAGTCCTTGGCAATGGCAATGGCAATGGCAATGAAAATGGTTTTGACTTTTCTGTTCAAGCAGTGAAGAAAACTTCTCAAGAAAATTTAGG
AAATGAAGAAGAAGATCATCATCATGAGGAAGAAGAAGAAGAGGAAGAAATGGAAAATGGGTTGATGAAGCTGAGGAAAATTATTCCAGGTGGTGATAATTTTAGTATTG
GAGGTAATTTGGATGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTCAATGTTCTTAGAGGTTTGGTTGAAACAAACACTTTT
TTTTAATTTTTAAATTTGTGGAAAATTGAAACATTTTTTTAGCCATATAATTTATATATATATATATATATATGAATTTTCATCT

Protein sequence

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MVRKMVRKGRRVFSIEPNKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNGNGNENGFDFSVQAVKKTSQ
ENLGNEEEDHHHEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

CSPI02G06190 (gene) of Cucumber (PI 183967) v1 genome