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CSPI02G06240 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G06240
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S acidic ribosomal protein P3
Genome locationChr2:4807948..4809371
RNA-Seq ExpressionCSPI02G06240
SyntenyCSPI02G06240
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]1.7e-5299.17Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAA AGGAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]1.5e-4895.04Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAA AGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]1.2e-4585.95Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TP+SAVFQVI+GG SGGGF  GGGAAAA AGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_023537756.1 60S acidic ribosomal protein P3 [Cucurbita pepo subsp. pepo]1.8e-4183.47Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVCR SGG+WTANQYSGDLEGSA STY+LQRKLV SALSVDSSGGVQSSFS+++PSSAVFQVI+GG SGGG  +GG AAAA AGGAAP AAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
          KEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_038889531.1 60S acidic ribosomal protein P3-2 [Benincasa hispida]1.1e-4894.26Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF-SAGGGAAAATAGGAAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF   GGGAAAA AGG APAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF-SAGGGAAAATAGGAAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein8.2e-5399.17Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAA AGGAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A1S3BRK9 60S acidic ribosomal protein P3-27.2e-4995.04Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAA AGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A5D3BNN6 60S acidic ribosomal protein P3-27.2e-4995.04Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAA AGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1ENN1 60S acidic ribosomal protein P3-2-like5.7e-4685.95Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TP+SAVFQVI+GG SGGGF  GGGAAAA AGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like5.7e-4685.95Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TP+SAVFQVI+GG SGGGF  GGGAAAA AGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

SwissProt top hitse value%identityAlignment
O01725 60S acidic ribosomal protein P25.2e-0466.67Show/hide
Query:  SGGGF--SAGGGAAAATAGGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD
        SGGG   +AGGG AAA  GGAAPAA E   EKKEE +EESDD D+G  LFD
Subjt:  SGGGF--SAGGGAAAATAGGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD

O24413 60S acidic ribosomal protein P38.0e-2960.98Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF--SAGGGAAAATAGGAAPAAAEA
        MGV+TFVCR++GG+WTA Q+SG++E SA + YELQR+LV +A + DS  GVQSSFS +TPSSAVFQVIVG   GG    S GGG  AA +GG   AAAEA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGF--SAGGGAAAATAGGAAPAAAEA

Query:  PAEKKEEVKEESDDEDLGLSLFD
        P E+K+E ++E  D+D+G SLFD
Subjt:  PAEKKEEVKEESDDEDLGLSLFD

P56724 60S acidic ribosomal protein P38.0e-2964.46Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGV+TFVCRSSG +WTA Q  G+LE SA + YELQR+LV +A + DS+ GVQSSFS ++PSSAVFQVI+ G  GGG + GGGAAA  A G A A A    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEE KEES+D DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

Q9LVC9 60S acidic ribosomal protein P3-29.1e-3365.83Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGGAAA   GG   AAA    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

Q9SVZ6 60S acidic ribosomal protein P3-11.7e-3167.21Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGFSAGG   AA++GG A  AA AP 
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDE--DLGLSLF
        E  E+ KEES++E  D G  LF
Subjt:  EKKEEVKEESDDE--DLGLSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family1.2e-3267.21Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGFSAGG   AA++GG A  AA AP 
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDE--DLGLSLF
        E  E+ KEES++E  D G  LF
Subjt:  EKKEEVKEESDDE--DLGLSLF

AT5G57290.1 60S acidic ribosomal protein family6.5e-3465.83Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGGAAA   GG   AAA    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

AT5G57290.2 60S acidic ribosomal protein family1.1e-2874.39Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGG
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGG
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGG

AT5G57290.3 60S acidic ribosomal protein family9.4e-3365.83Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF+AGGGAAA   GG   AAA    
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGTAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCTGACTCCACCTACGAGCTCCAGAGGAA
ACTTGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCCTTCATTACTCCTTCCTCCGCCGTTTTCCAGGTGATTGTTGGCGGTGGAAGTG
GTGGCGGTTTCAGTGCTGGTGGTGGAGCTGCAGCTGCCACTGCTGGAGGAGCTGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGT
GATGATGAAGATCTTGGCCTATCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
TTTAACAAAAGCAAACCCTCGTTTTCATCTCTCGCTAGGGTTTCATCTGCCAACATAAAAACCAAACACAATCCGTAGAAGAGAGCCGTCCACTCCAAACTCACTCCTTC
ATTCTCTTCAACCCAAATCCCCCATTCCATCATCAAACCAAACAATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGTAAGTGGACCGCCAATCAGTATTCCGGT
GACCTTGAAGGCTCCGCTGACTCCACCTACGAGCTCCAGAGGAAACTTGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCCTTCATTAC
TCCTTCCTCCGCCGTTTTCCAGGTGATTGTTGGCGGTGGAAGTGGTGGCGGTTTCAGTGCTGGTGGTGGAGCTGCAGCTGCCACTGCTGGAGGAGCTGCTCCAGCTGCTG
CAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGTGATGATGAAGATCTTGGCCTATCACTTTTTGATTAGATTGGTATTTTAATTACTCGTTATTGCTTT
TTTCAACCTAAGAGTTTGTAGCACTAAGGTTTTCTTTTCTGGAAATTATGTCTATGCATTTACTTGAATTTGCAAGTTCAGTTGATGTTCTTGTTTAAGGACGTAAATTT
TGTTACTGACCCTTGTCAAATGGTTGAGAATTAGATATGTTATTTTGTTATTTCGTTTGGGAAGTTACTTCTGATTTCACCATCATAGATTTTATCTATTTGTTGTTAGA
GGAGATTCTAGGCCATGGTGGTTAATTGTTTTTCTTTCTAACTATGAGTAGAGAATGAGAATTTGAACCTTAATTTGT
Protein sequenceShow/hide protein sequence
MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIVGGGSGGGFSAGGGAAAATAGGAAPAAAEAPAEKKEEVKEES
DDEDLGLSLFD