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CSPI02G07600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G07600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA-directed RNA polymerase
Genome locationChr2:6559374..6559565
RNA-Seq ExpressionCSPI02G07600
SyntenyCSPI02G07600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05133.1 hypothetical protein E5676_scaffold1769G00370 [Cucumis melo var. makuwa]4.8e-0662.5Show/hide
Query:  MAVPSLPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKG
        MA+PSLP  K  KP T N +RNKLQR+LQ L+SSICYD + +L NR+G
Subjt:  MAVPSLPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKG

TrEMBL top hitse value%identityAlignment
A0A0A0LHM7 Uncharacterized protein9.4e-2495.24Show/hide
Query:  MAVPSLPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKGSEAIQSGSSLGMIVT
        MAVPSLPLKKA KPCTDNNKRNKLQRKLQTL+SSICYD TSSLDNRKGSEAIQSGSSLGMIVT
Subjt:  MAVPSLPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKGSEAIQSGSSLGMIVT

A0A5A7VFY6 DNA-directed RNA polymerase4.8e-0462.22Show/hide
Query:  LPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKGSE
        LP  KA KP T N+KRNKLQR+LQ L+SSICY  + +L NR G E
Subjt:  LPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKGSE

A0A5D3BZG4 Uncharacterized protein2.3e-0662.5Show/hide
Query:  MAVPSLPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKG
        MA+PSLP  K  KP T N +RNKLQR+LQ L+SSICYD + +L NR+G
Subjt:  MAVPSLPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCCCTTCTCTTCCCCTAAAAAAGGCTGATAAGCCTTGCACTGACAACAACAAACGAAATAAACTTCAAAGGAAATTACAAACTCTTCGATCATCAATTTGTTA
TGATAATACATCATCTTTAGACAATAGGAAGGGTTCCGAGGCTATCCAATCAGGATCTTCTCTTGGAATGATTGTGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCCCTTCTCTTCCCCTAAAAAAGGCTGATAAGCCTTGCACTGACAACAACAAACGAAATAAACTTCAAAGGAAATTACAAACTCTTCGATCATCAATTTGTTA
TGATAATACATCATCTTTAGACAATAGGAAGGGTTCCGAGGCTATCCAATCAGGATCTTCTCTTGGAATGATTGTGACTTGA
Protein sequenceShow/hide protein sequence
MAVPSLPLKKADKPCTDNNKRNKLQRKLQTLRSSICYDNTSSLDNRKGSEAIQSGSSLGMIVT