| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004138895.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucumis sativus] | 6.4e-176 | 100 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_008441761.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo] | 4.6e-174 | 99.06 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK TWVESCPTRVFELD VTHQVMVV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022147788.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica charantia] | 5.3e-170 | 96.25 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+DSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE++TWVESCPTRVFE+D THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022927752.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucurbita moschata] | 2.0e-169 | 96.25 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_038891253.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Benincasa hispida] | 5.6e-172 | 97.5 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCH+DQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALD+KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LM+TLT EEKRTWVESCPTRVFE D+VTHQV VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHS1 RPOLD domain-containing protein | 3.1e-176 | 100 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A1S3B3P9 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like | 2.2e-174 | 99.06 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK TWVESCPTRVFELD VTHQVMVV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1D221 DNA-directed RNA polymerases II, IV and V subunit 3-like | 2.6e-170 | 96.25 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+DSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE++TWVESCPTRVFE+D THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1ELW4 DNA-directed RNA polymerases II, IV and V subunit 3-like | 9.7e-170 | 96.25 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1JIE7 DNA-directed RNA polymerases II, IV and V subunit 3-like | 9.7e-170 | 96.25 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P97760 DNA-directed RNA polymerase II subunit RPB3 | 6.9e-48 | 40.69 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL ++ KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S ELD D YD + + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q39211 DNA-directed RNA polymerases II, IV and V subunit 3 | 5.5e-146 | 81.25 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G++YQRFPK+KIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ ++ + ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ES PT+VF +D VT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| Q39212 DNA-directed RNA polymerases IV and V subunit 3B | 9.8e-135 | 76.56 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ S ++T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ES PT+VF +D VT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 | 2.4e-48 | 41.03 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL D+ KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S ELD D YD + + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q54DH7 DNA-directed RNA polymerase II subunit rpb3 | 7.1e-69 | 48.82 | Show/hide |
Query: SSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCS
S R P+++I E+++D F L +TD S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+ ++RDC D +C+ CS
Subjt: SSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCS
Query: VEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLME
VE L KC ++ DVTS DL S + V+PV S ++ E + I IVKLRRGQE++LRAIA+KG+GK+HAKWSP+ T+ ++P I +N++ ++
Subjt: VEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLME
Query: TLTLEEKRTWVESCPTRVFELD--TVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
LT ++K WV SCPT+V+ T QV + DP Y E KKAE+ GK LV + ++D FIFTVES+GA+K ++L AI I+K+KL ++
Subjt: TLTLEEKRTWVESCPTRVFELD--TVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 6.7e-30 | 31.66 | Show/hide |
Query: GSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G+ Y F KV + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSAAATGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P FS S + E + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSAAATGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
SP T + P + + ++ + L V CP VF+++ + + V P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 6.7e-30 | 31.66 | Show/hide |
Query: GSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G+ Y F KV + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSAAATGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P FS S + E + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVP---VDFSDSAAATGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
SP T + P + + ++ + L V CP VF+++ + + V P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT2G15400.1 DNA-directed RNA polymerase family protein | 6.9e-136 | 76.56 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ S ++T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ES PT+VF +D VT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| AT2G15400.2 DNA-directed RNA polymerase family protein | 6.2e-92 | 74.03 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ S ++T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQV
+M TLT EEK +ES PT+VF +D VT QV
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 3.9e-147 | 81.25 | Show/hide |
Query: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G++YQRFPK+KIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ ++ + ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ES PT+VF +D VT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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