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CSPI02G08500 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G08500
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGag-pol polyprotein
Genome locationChr2:8041839..8042171
RNA-Seq ExpressionCSPI02G08500
SyntenyCSPI02G08500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046626.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]9.5e-2662.73Show/hide
Query:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAAN
        + EDE + E NV  V+D +N SF L EKLSNT LV+K LR+L S+FN+KV  IEEANDITT++LD+LFGSLRTFELSFD+N +KK+S I FQG SDD   
Subjt:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAAN

Query:  LSRKQLIMRI
         + KQ  MRI
Subjt:  LSRKQLIMRI
KAA0060153.1 Receptor-like protein 12 [Cucumis melo var. makuwa]1.8e-2461.17Show/hide
Query:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL
        M EDE + E NV VLD +N SFTLGEKL++TKLVRK LRSL  + NMKV  IE+AN+I  +RLD+LFGSLRTF+LS  DN+SKK++++ FQGVS++   L
Subjt:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL

Query:  SRK
        + K
Subjt:  SRK
KAA0065593.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.0e-2360Show/hide
Query:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL
        MAEDE IV  +VRVLD  N S  LG  +SNTKLVRK LRSL S F+MKV+ IEEANDITT++LD+LFGSLRTFEL  +D   KK+S I  Q ++D+   L
Subjt:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL

Query:  SRKQL
        S++++
Subjt:  SRKQL
TYK00077.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.5e-2366.67Show/hide
Query:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQG
        + EDE + E NV  V+D +N SF L EKL NTKLV+K LR+L+S+FN+KV  IEEANDITT++LD+LFGSLRTFELSFDDN +KK+S I FQG
Subjt:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQG
TYK19518.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.2e-2460.19Show/hide
Query:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL
        M EDE + E NV VLD +N SFTLGEKL++TKLVRK LRSL  + NMKV  IE+AN+I  +RLD+LF SLRTF+LS +DN+SKK++++ FQGVS++   L
Subjt:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL

Query:  SRK
        + K
Subjt:  SRK
TrEMBL top hitse value%identityAlignment
A0A5A7TXB8 Gag-proteinase polyprotein4.6e-2662.73Show/hide
Query:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAAN
        + EDE + E NV  V+D +N SF L EKLSNT LV+K LR+L S+FN+KV  IEEANDITT++LD+LFGSLRTFELSFD+N +KK+S I FQG SDD   
Subjt:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAAN

Query:  LSRKQLIMRI
         + KQ  MRI
Subjt:  LSRKQLIMRI
A0A5A7UW05 Receptor-like protein 128.6e-2561.17Show/hide
Query:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL
        M EDE + E NV VLD +N SFTLGEKL++TKLVRK LRSL  + NMKV  IE+AN+I  +RLD+LFGSLRTF+LS  DN+SKK++++ FQGVS++   L
Subjt:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL

Query:  SRK
        + K
Subjt:  SRK
A0A5D3BLP1 Gag-pol polyprotein3.6e-2366.67Show/hide
Query:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQG
        + EDE + E NV  V+D +N SF L EKL NTKLV+K LR+L+S+FN+KV  IEEANDITT++LD+LFGSLRTFELSFDDN +KK+S I FQG
Subjt:  MAEDEKIVELNVR-VLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQG
A0A5D3C743 Gag-pol polyprotein9.5e-2460Show/hide
Query:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL
        MAEDE IV  +VRVLD  N S  LG  +SNTKLVRK LRSL S F+MKV+ IEEANDITT++LD+LFGSLRTFEL  +D   KK+S I  Q ++D+   L
Subjt:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL

Query:  SRKQL
        S++++
Subjt:  SRKQL
A0A5D3D7H8 Gag-pol polyprotein2.5e-2460.19Show/hide
Query:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL
        M EDE + E NV VLD +N SFTLGEKL++TKLVRK LRSL  + NMKV  IE+AN+I  +RLD+LF SLRTF+LS +DN+SKK++++ FQGVS++   L
Subjt:  MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANL

Query:  SRK
        + K
Subjt:  SRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGGATGAAAAAATAGTTGAACTTAATGTTCGTGTTCTGGACTCATCAAATGCATCTTTTACTCTTGGGGAAAAGCTTTCTAATACAAAATTGGTAAGGAAAGC
CTTAAGATCTCTTTCTTCTCAATTTAATATGAAAGTCATTACAATAGAGGAAGCTAATGATATTACTACCATAAGACTTGATAAGTTATTTGGATCTTTAAGAACTTTTG
AACTATCTTTTGATGATAATACATCGAAGAAGGAAAGTAGTATTTTGTTCCAAGGTGTAAGTGATGATGCTGCAAATCTATCCAGAAAACAACTCATAATGAGAATCTTG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGGATGAAAAAATAGTTGAACTTAATGTTCGTGTTCTGGACTCATCAAATGCATCTTTTACTCTTGGGGAAAAGCTTTCTAATACAAAATTGGTAAGGAAAGC
CTTAAGATCTCTTTCTTCTCAATTTAATATGAAAGTCATTACAATAGAGGAAGCTAATGATATTACTACCATAAGACTTGATAAGTTATTTGGATCTTTAAGAACTTTTG
AACTATCTTTTGATGATAATACATCGAAGAAGGAAAGTAGTATTTTGTTCCAAGGTGTAAGTGATGATGCTGCAAATCTATCCAGAAAACAACTCATAATGAGAATCTTG
TAG
Protein sequenceShow/hide protein sequence
MAEDEKIVELNVRVLDSSNASFTLGEKLSNTKLVRKALRSLSSQFNMKVITIEEANDITTIRLDKLFGSLRTFELSFDDNTSKKESSILFQGVSDDAANLSRKQLIMRIL