; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G08860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G08860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPOU domain, class 3, transcription factor 3-A
Genome locationChr2:8472470..8473317
RNA-Seq ExpressionCSPI02G08860
SyntenyCSPI02G08860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017165.1 hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2563.03Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSI------KSEG----RAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPP
        M+GLIP+FYRAMKK R R QY+VLS +A +     A S SFNIADFYVDPPS       KSE     RA+RRYNS+ GST +EWRR+  AA   SSHGP 
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSI------KSEG----RAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPP

Query:  PEQQLVRFRSQRILSCLTG
           QLVRFRSQRILSCLTG
Subjt:  PEQQLVRFRSQRILSCLTG

TYK22824.1 uncharacterized protein E5676_scaffold15341G00010 [Cucumis melo var. makuwa]1.2e-3191.25Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVA
        MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR YRRYNSY GST QEWRRSG A
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVA

XP_004138944.1 uncharacterized protein LOC101210346 [Cucumis sativus]3.7e-54100Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

XP_008441665.1 PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo]1.2e-4992.73Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR YRRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRS
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

XP_038875434.1 uncharacterized protein LOC120067892 [Benincasa hispida]9.4e-3473.91Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPS------IKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQ
        M+GLIP+FYRAMKKNR RRQY+VLS KAE+EAE   AS+SFNIADFYVD PS       KS+GRAYRRYNSY GST Q+WRR+G A GK S HG PP+QQ
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPS------IKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQ

Query:  LVRFRSQRILSCLTG
        LVRFRSQRIL CLTG
Subjt:  LVRFRSQRILSCLTG

TrEMBL top hitse value%identityAlignment
A0A0A0LL24 Uncharacterized protein1.8e-54100Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

A0A1S3B4K9 uncharacterized protein LOC1034857495.9e-5092.73Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR YRRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRS
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

A0A5A7ST27 Uncharacterized protein5.9e-5092.73Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR YRRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRS
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

A0A5D3DGT1 Uncharacterized protein5.6e-3291.25Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVA
        MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR YRRYNSY GST QEWRRSG A
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVA

A0A6J1I2E5 uncharacterized protein LOC1114689907.8e-2663.87Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSI------KSEG----RAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPP
        M+GLIP+FYRAMKK R R QY+VLS +A + A   A S SFNIADFYVDPPS       KSE     RA RRYNS+ GST +EWRR+  AA   SSHGP 
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSI------KSEG----RAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPP

Query:  PEQQLVRFRSQRILSCLTG
           QLVRFRSQRILSCLTG
Subjt:  PEQQLVRFRSQRILSCLTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44010.1 unknown protein2.3e-0936.28Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAES-EAETEAASLSFNIADFYVDPPSIKSEGRAYRR---YNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLV
        MDGLIP+  +A+KKN  RR+Y  LS  A + E+   A+ +  N+            +GR +RR      ++  +++E +R+G  A + S   PP E QLV
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAES-EAETEAASLSFNIADFYVDPPSIKSEGRAYRR---YNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLV

Query:  RFRSQRILSCLTG
        RF+S R+ SC++G
Subjt:  RFRSQRILSCLTG

AT3G59880.1 unknown protein9.5e-0830.4Show/hide
Query:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAES-------------EAETEAASLSFNIADF-YVDPPSIKSEGRAYRRYN--SYAGSTTQEWRRSGVAAGKS
        MDGLIP+ ++AM+KNR R++Y  LS+ A +              A+++ + +S   + F +++  ++  + R +R ++   ++  + +E +RSGV  G  
Subjt:  MDGLIPLFYRAMKKNRRRRQYTVLSTKAES-------------EAETEAASLSFNIADF-YVDPPSIKSEGRAYRRYN--SYAGSTTQEWRRSGVAAGKS

Query:  SSHGPPPEQQLVRFRSQRILSCLTG
            P    QLVR RS R+ SC++G
Subjt:  SSHGPPPEQQLVRFRSQRILSCLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTTTGATTCCATTGTTCTACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGC
TTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGT
GGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCAT
TAA
mRNA sequenceShow/hide mRNA sequence
CAAGGAATGAATTTGCATCTAAAATAAAATAAAGAAACAAACAAGAAATTGCATAGTGGTCAGGTCAGTACCCAATTAAATATATACCCTAAAACCAAACCCAACCAAAC
ACACCTTTCAATACAATTACAAAAATAAAATAAAAATATCAAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAAGGAAATGGATGGTTTGATTCCATTGTTC
TACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGCTTCTTTATCTTTCAACATTGCTGA
TTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCG
GGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAAAATTTGTAAGGGCTTATTCTT
CCAAACTTAAGATTAATCGATGTGTACAGCATAATTATTATTCATCTTCAAACCATACTTGATGTTGATACTCTTCAAAGCTTCTGCTTTAATTCAAATTTTGTGCTTTT
CTTTTTGGTTGTTGTTATGTATTGCAAAGTTGGTCAAATGGAGATTGGTGGACAAAGTTATGTTATTTGACTTCTTGTGATTCATGAGCTGTAATGAGAAATAATCAAAT
AAATCAACAACCCATTACTCTACTTTTGTTTTATTCATCTTGTCTAAGTTCTTCCTCTTTTTTCCTTTTTTAAATATT
Protein sequenceShow/hide protein sequence
MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH