CuGenDBv2

Gene ID	CSPI02G09070
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	Chr2:8766371..8767751
RNA-Seq Expression	CSPI02G09070
Synteny	CSPI02G09070
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0016020 - membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function)
InterPro domains	IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAN83181.1 hypothetical protein VITISV_013310 [Vitis vinifera]

1.1e-172

68.06

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        MDENG I+RNKARLVAQG+ QEEGIDYEETFAP                                     EVYVEQPPGF+SF+ PNHV++L+KTLY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QA RAWY+RLSKF+L+  FKMGKID TLFIK K NDML+VQIYVDDIIFG+TN SLCEEFSKCMH+EFEMSMMGEL+FF+GLQIKQLK+G FI+Q KY R
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        DLLK+F + E K  KTPMS++ KLD D KGK ++   YRGMIGSLLYLTASRPDIM+S+CLCARFQSCPKESH  AVKRIL+YL G +D+GL WYP+   
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        F L+GY DADFAG  ++RKSTS TC FLG SLVSW SKKQNS+ALST EAEYIA    CAQILWMKQTL DF L F++VPI CDNTSAIN++KN + HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+H Q G ITLEFVS+ +QL DIFTKPLSEE F   R +LG+I
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

KYP33754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]

8.5e-168

66.3

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        +DE+G +IRNKARLVA+GY QEEGIDYEET+AP                                     EVYVEQPPGFE+ + PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSMMGEL+FFLGLQI+Q K+GIFI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        +LLK+F +   K   TPMSTT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVC CAR+QS PKESH  AVKRI++YLL T ++GL WYP+N+ 
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L D+GL  D++PI CDNTSAINL+KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELG +
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

KYP55105.1 Copia protein [Cajanus cajan]

1.1e-167

66.08

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        +DE+G +IRNKARLVA+GY QEEGIDYEET+AP                                     EVYVEQPPGFE+ + PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSM+GEL+FF+GLQI+Q K+GIFI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        + LK+F +   K    P+STT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVCLCAR+QS PKESH  AVKRI++YLLGT ++GL WYP+N+ 
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L DFGL  D++PI CDNTSAINL+KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELGI+
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

KYP66812.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]

1.7e-168

66.74

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        +DE+G +IRNKARLVA+GY QEEGIDYEET+AP                                     EVYVEQPPGFE+ + PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSMMGEL+FFLGLQI+Q K+GIFI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        +LLK+F +   K   TPMSTT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVCLCAR+QS PKESH  AVKRI++ LLGT ++GL WYP+N+ 
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L D+GL  D++PI CDNTSAINL+KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELGI+
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

RVW71911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

2.8e-179

70.04

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Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        MDENG I+RNKARLVAQGY QEEGIDYEETFAP                                     EVYVEQPPGF+SF+ PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLL+  FKMGKID TLFIK K  DML+VQIYVDDIIFG+TN SLCE+FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARFQSCPKESH  AVKRIL+YL GT+++GL WYP+   
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        F L+G+SDADFAG  ++RKSTSGTC FLG SLVSW SKKQNSVALST EAEYIA   CCAQILWMKQTL DF L F++VPI CDNTSAIN++KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+H Q G ITLEFVS+ +QLADIFTKPLSEE F   R +LG+I
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

TrEMBL top hits

e value

%identity

Alignment

A0A151QU14 Retrovirus-related Pol polyprotein from transposon TNT 1-94

4.1e-168

66.3

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        +DE+G +IRNKARLVA+GY QEEGIDYEET+AP                                     EVYVEQPPGFE+ + PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSMMGEL+FFLGLQI+Q K+GIFI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        +LLK+F +   K   TPMSTT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVC CAR+QS PKESH  AVKRI++YLL T ++GL WYP+N+ 
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L D+GL  D++PI CDNTSAINL+KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELG +
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

A0A151SK19 Copia protein

5.4e-168

66.08

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        +DE+G +IRNKARLVA+GY QEEGIDYEET+AP                                     EVYVEQPPGFE+ + PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSM+GEL+FF+GLQI+Q K+GIFI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        + LK+F +   K    P+STT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVCLCAR+QS PKESH  AVKRI++YLLGT ++GL WYP+N+ 
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L DFGL  D++PI CDNTSAINL+KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELGI+
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

A0A151TIF5 Retrovirus-related Pol polyprotein from transposon TNT 1-94

8.3e-169

66.74

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        +DE+G +IRNKARLVA+GY QEEGIDYEET+AP                                     EVYVEQPPGFE+ + PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSMMGEL+FFLGLQI+Q K+GIFI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        +LLK+F +   K   TPMSTT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVCLCAR+QS PKESH  AVKRI++ LLGT ++GL WYP+N+ 
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L D+GL  D++PI CDNTSAINL+KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELGI+
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

A0A438GI90 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.4e-179

70.04

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        MDENG I+RNKARLVAQGY QEEGIDYEETFAP                                     EVYVEQPPGF+SF+ PNHV+KL+K LY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLL+  FKMGKID TLFIK K  DML+VQIYVDDIIFG+TN SLCE+FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARFQSCPKESH  AVKRIL+YL GT+++GL WYP+   
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        F L+G+SDADFAG  ++RKSTSGTC FLG SLVSW SKKQNSVALST EAEYIA   CCAQILWMKQTL DF L F++VPI CDNTSAIN++KNP+ HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+H Q G ITLEFVS+ +QLADIFTKPLSEE F   R +LG+I
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

A5BEZ1 Reverse transcriptase Ty1/copia-type domain-containing protein

1.6e-172

68.06

Show/hide

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK
        MDENG I+RNKARLVAQG+ QEEGIDYEETFAP                                     EVYVEQPPGF+SF+ PNHV++L+KTLY LK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QA RAWY+RLSKF L+  FKMGKID TLFIK K NDML+VQIYVDDIIFG+TN SLCEEFSKCMH+EFEMSMMGEL+FF+GLQIKQLK+G FI+Q KY R
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE
        DLLK+F + E K  KTPMS++ KLD D KGK ++   YRGMIGSLLYLTASRPDIM+S+CLCARFQSCPKESH  AVKRIL+YL G +D+GL WYP+   
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVE

Query:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR
        F L+GY DADFAG  ++RKSTS TC FLG SLVSW SKKQNS+ALST EAEYIA    CAQILWMKQTL DF L F++VPI CDNTSAIN++KN + HSR
Subjt:  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        TKHI+IRHHF+R+H Q G ITLEFVS+ +QL DIFTKPLSEE F   R +LG+I
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

6.3e-73

35.62

Show/hide

Query:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ
        +E GN IR KARLVA+G+ Q+  IDYEETFAP                                     E+Y+  P G       ++V KL K +Y LKQ
Subjt:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ

Query:  APRAWYDRLSKFLLENDFKMGKIDNTLFIKVKN--NDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYT
        A R W++   + L E +F    +D  ++I  K   N+ + V +YVDD++  + + +    F + +  +F M+ + E+  F+G++I+  +D I++SQ  Y 
Subjt:  APRAWYDRLSKFLLENDFKMGKIDNTLFIKVKN--NDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYT

Query:  RDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKT-YRGMIGSLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPR
        + +L KF +       TP+   +K++ +      D  T  R +IG L+Y +  +RPD+  +V + +R+ S      +  +KR+L+YL GTID+ L  + +
Subjt:  RDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKT-YRGMIGSLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPR

Query:  NVEF--NLVGYSDADFAGSLLDRKSTSG-TCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTK
        N+ F   ++GY D+D+AGS +DRKST+G   +    +L+ W +K+QNSVA S+TEAEY+A+     + LW+K  L    +K +N + I+ DN   I++  
Subjt:  NVEF--NLVGYSDADFAGSLLDRKSTSG-TCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTK

Query:  NPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRCDAS
        NP  H R KHIDI++HF RE VQN  I LE++ + NQLADIFTKPL    F + R +LG+++ D S
Subjt:  NPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRCDAS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.7e-65

34.28

Show/hide

Query:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ
        D +  ++R KARLV +G+ Q++GID++E F+P                                     E+Y+EQP GFE     + V KL K+LY LKQ
Subjt:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ

Query:  APRAWYDRLSKFLLENDFKMGKIDNTLFIK-VKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI--KQLKDGIFISQEKY
        APR WY +   F+    +     D  ++ K    N+ +I+ +YVDD++    +  L  +    +   F+M  +G     LG++I  ++    +++SQEKY
Subjt:  APRAWYDRLSKFLLENDFKMGKIDNTLFIK-VKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI--KQLKDGIFISQEKY

Query:  TRDLLKKFKLNEGKVAKTPMSTTTKLDK-------DEKGKCVDIKTYRGMIGSLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDV
           +L++F +   K   TP++   KL K       +EKG    +  Y   +GSL+Y +  +RPDI  +V + +RF   P + H+ AVK IL+YL GT   
Subjt:  TRDLLKKFKLNEGKVAKTPMSTTTKLDK-------DEKGKCVDIKTYRGMIGSLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDV

Query:  GLYWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAIN
         L +     +  L GY+DAD AG + +RKS++G         +SW SK Q  VALSTTEAEYIA      +++W+K+ L + GL      ++CD+ SAI+
Subjt:  GLYWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAIN

Query:  LTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTK--PLSEESFCK
        L+KN ++H+RTKHID+R+H+IRE V +  + +  +S+N   AD+ TK  P ++   CK
Subjt:  LTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTK--PLSEESFCK

P92519 Uncharacterized mitochondrial protein AtMg00810

7.5e-34

36.28

Show/hide

Query:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY
        +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   +L     N G +   PMST   L  +      K  D   +
Subjt:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY

Query:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSK
        R ++G+L YLT +RPDI ++V +  +    P  + F  +KR+L+Y+ GTI  GLY + +N + N+  + D+D+AG    R+ST+G C FLG +++SW +K
Subjt:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSK

Query:  KQNSVALSTTEAEYIAVASCCAQILW
        +Q +V+ S+TE EY A+A   A++ W
Subjt:  KQNSVALSTTEAEYIAVASCCAQILW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

1.7e-81

38.34

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Query:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ
        + +G++ R KARLVA+GY Q  G+DY ETF+P                                     +VY+ QPPGF   D PN+V KL K LY LKQ
Subjt:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ

Query:  APRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD
        APRAWY  L  +LL   F     D +LF+  +   ++ + +YVDDI+    + +L       +   F +    EL +FLG++ K++  G+ +SQ +Y  D
Subjt:  APRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD

Query:  LLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEF
        LL +  +   K   TPM+ + KL      K  D   YRG++GSL YL  +RPDI ++V   ++F   P E H  A+KRIL+YL GT + G++    N   
Subjt:  LLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEF

Query:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSR
        +L  YSDAD+AG   D  ST+G   +LG   +SW SKKQ  V  S+TEAEY +VA+  +++ W+   L + G++    P I+CDN  A  L  NP+ HSR
Subjt:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRCDAS
         KHI I +HFIR  VQ+G + +  VS+++QLAD  TKPLS  +F     ++G+ R   S
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRCDAS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

3.3e-82

37.25

Show/hide

Query:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ
        + +G++ R KARLVA+GY Q  G+DY ETF+P                                     EVY+ QPPGF   D P++V +L K +Y LKQ
Subjt:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFDLPNHVYKLEKTLYALKQ

Query:  APRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD
        APRAWY  L  +LL   F     D +LF+  +   ++ + +YVDDI+    ++ L +     +   F +    +L +FLG++ K++  G+ +SQ +YT D
Subjt:  APRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD

Query:  LLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEF
        LL +  +   K   TPM+T+ KL      K  D   YRG++GSL YL  +RPD+ ++V   +++   P + H++A+KR+L+YL GT D G++    N   
Subjt:  LLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEF

Query:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSR
        +L  YSDAD+AG   D  ST+G   +LG   +SW SKKQ  V  S+TEAEY +VA+  +++ W+   L + G++  + P I+CDN  A  L  NP+ HSR
Subjt:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSR

Query:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRCDAS
         KHI + +HFIR  VQ+G + +  VS+++QLAD  TKPLS  +F     ++G+I+   S
Subjt:  TKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRCDAS

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

2.4e-67

36.4

Show/hide

Query:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFD----LPNHVYKLEKTLY
        + +G I R KARLVA+GY Q+EGID+ ETF+P                                     E+Y++ PPG+ +       PN V  L+K++Y
Subjt:  DENGNIIRNKARLVAQGYCQEEGIDYEETFAP-------------------------------------EVYVEQPPGFESFD----LPNHVYKLEKTLY

Query:  ALKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEK
         LKQA R W+ + S  L+   F     D+T F+K+     L V +YVDDII  S N +  +E    + + F++  +G L +FLGL+I +   GI I Q K
Subjt:  ALKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEK

Query:  YTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPR
        Y  DLL +  L   K +  PM  +        G  VD K YR +IG L+YL  +R DI F+V   ++F   P+ +H  AV +IL Y+ GT+  GL+ Y  
Subjt:  YTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPR

Query:  NVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPI
          E  L  +SDA F      R+ST+G C FLG+SL+SW SKKQ  V+ S+ EAEY A++    +++W+ Q   +  L       +FCDNT+AI++  N +
Subjt:  NVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPI

Query:  HHSRTKHIDIRHHFIREH-VQNGHITLEFVSSNNQLADIFTKPLS
         H RTKHI+   H +RE  V    ++  F + + Q  D FT+ LS
Subjt:  HHSRTKHIDIRHHFIREH-VQNGHITLEFVSSNNQLADIFTKPLS

ATMG00810.1 DNA/RNA polymerases superfamily protein

5.3e-35

36.28

Show/hide

Query:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY
        +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   +L     N G +   PMST   L  +      K  D   +
Subjt:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY

Query:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSK
        R ++G+L YLT +RPDI ++V +  +    P  + F  +KR+L+Y+ GTI  GLY + +N + N+  + D+D+AG    R+ST+G C FLG +++SW +K
Subjt:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSK

Query:  KQNSVALSTTEAEYIAVASCCAQILW
        +Q +V+ S+TE EY A+A   A++ W
Subjt:  KQNSVALSTTEAEYIAVASCCAQILW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGAAGTTTATGT
AGAACAACCACCGGGCTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGGAAAAGACTCTTTATGCCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTA
GCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATATT
ATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAAT
CAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACTA
CCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTTT
AGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATATTG
GTATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTT
CCTTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAA
ACTCTTTGTGATTTTGGATTAAAATTTGATAATGTGCCTATATTTTGTGATAATACTAGTGCCATAAATTTGACTAAGAATCCTATTCATCATTCTAGAACTAAGCATAT
AGATATTAGGCATCACTTTATTAGAGAGCATGTACAAAATGGTCATATTACTCTTGAGTTTGTAAGTTCCAATAATCAATTAGCGGATATATTTACCAAACCTTTGAGTG
AAGAAAGCTTTTGTAAAAATAGGCTTGAGCTTGGAATTATTCGTTGTGATGCATCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDENGNIIRNKARLVAQGYCQEEGIDYEETFAPEVYVEQPPGFESFDLPNHVYKLEKTLYALKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDI
IFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMF
SVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLYWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQ
TLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRCDAS

CSPI02G09070 (gene) of Cucumber (PI 183967) v1 genome