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CSPI02G09150 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G09150
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionsmall EDRK-rich factor 2
Genome locationChr2:8851424..8852435
RNA-Seq ExpressionCSPI02G09150
SyntenyCSPI02G09150
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR040211 - Small EDRK-rich factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033303.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]3.7e-2093.94Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
TYK21602.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]3.7e-2093.94Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
XP_004138960.1 small EDRK-rich factor 2 [Cucumis sativus]1.9e-24100Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
XP_008457241.1 PREDICTED: small EDRK-rich factor 2 [Cucumis melo]1.5e-2194.12Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
XP_038876165.1 small EDRK-rich factor 2 [Benincasa hispida]1.7e-2091.18Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        MTRGNQREKDRER+QARN GKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
TrEMBL top hitse value%identityAlignment
A0A0A0LHU5 4F5 domain-containing protein9.2e-25100Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
A0A1S3C551 small EDRK-rich factor 27.3e-2294.12Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
A0A5A7SS85 Small EDRK-rich factor 21.8e-2093.94Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
A0A5D3DDD9 Small EDRK-rich factor 21.8e-2093.94Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
A0A6J1KZW7 small EDRK-rich factor 2-like1.2e-1989.71Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
        MTRGNQREKDRERAQAR GGKGK KDDGLTPEQRRERDAKALQEK AKKAAQA S GNSSGGK S KK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24100.1 Uncharacterised protein family SERF2.5e-1983.87Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGG
        MTRG+QRE+DRERA AR GGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQA +  +S GG
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGG
AT4G13615.1 Uncharacterised protein family SERF4.1e-1774.29Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQA--GSGGNSSGGKPSTKK
        MTRG+QRE+DRERA AR GGKGKN DDGLTPEQRRERD KALQEK AKKAAQA   S G ++GGK +  K
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQA--GSGGNSSGGKPSTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCGGAAACCAGAGGGAGAAAGACCGAGAAAGGGCTCAGGCTCGCAACGGTGGCAAGGGAAAAAACAAAGACGATGGTTTGACTCCCGAGCAGCGCCGTGAAAG
AGATGCTAAGGCGCTACAAGAAAAAACCGCGAAGAAGGCGGCTCAGGCGGGATCGGGAGGTAATTCATCCGGAGGTAAACCGAGCACTAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
AGAGAAGAGAAGAGAAGAGAAGAGAAGAGGATAAAATAGAATAGGAATACAAGTGGGAGCACTCACTATATAATGAATCTCCGATTCCCCTGTTCTTTCGATTACCTTCG
GTTGACTCTCTGTTTTTAGAGATTGGAATTCTTCGTTTCTTCGCCTAAGTCTCTTCCCCAATCCTCCAATTCCACCACCTTCTTCACCACCCACTTCAATAATCTCCCTC
AAATGACTCGCGGAAACCAGAGGGAGAAAGACCGAGAAAGGGCTCAGGCTCGCAACGGTGGCAAGGGAAAAAACAAAGACGATGGTTTGACTCCCGAGCAGCGCCGTGAA
AGAGATGCTAAGGCGCTACAAGAAAAAACCGCGAAGAAGGCGGCTCAGGCGGGATCGGGAGGTAATTCATCCGGAGGTAAACCGAGCACTAAGAAGTAAAATGGTCCTGG
GTTTAGAATCATGAATTATGTTGATTTTTCCTAGCTTTGTTCTTGTCGGAACGCTGAGATCTCGTGGTTCTTAGACTGTTTGATATTGGAGGAATAACCTTCATATGTTT
CAGTAATGTGAATTGATATATGTATTATGCTGTCAACGTTCATTGTTGATTATTGTTTGTCATCATCTTTGTACTCTTGATCTCTTCTTCTGTCGAGGTAACTATGCTGT
TAATTGCGGATTTTGTTGAGATTTTATCCTACTGTAAAATTATTGTTCATCTGTTATGATATCTCACTGGTTCCTATGCCATTATTAATTTTGGG
Protein sequenceShow/hide protein sequence
MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAGSGGNSSGGKPSTKK