| GenBank top hits | e value | %identity | Alignment |
|---|
| AQY61297.1 Pol [Coffea canephora] | 3.9e-43 | 52.63 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLTD---TKKVI
MR+KLP S WGHAILHA +L RIR T+YH YS +QL +G+EPNISHLRIFGC VYVPI PPQR K+G QRRLGIYVG+E PSII+Y+EPLT T + +
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLTD---TKKVI
Query: -----ESYIPA----ANAPSK---IKIPIQ------QVVESVLRQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
ES+ P N P K KI + + ++ R++ ++DNIFAYN+A +I+ E+E EP+S+DE DW +WK+A Q
Subjt: -----ESYIPA----ANAPSK---IKIPIQ------QVVESVLRQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
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| AQY61299.1 Pol [Coffea canephora] | 7.2e-37 | 35.08 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
MR+KLP S WGHAILHA +L RIR TSYH YS +QL +G+EPNISHLRIFGC VYVPI P QR K+G QRRLGIYVG+E PSII+Y+EPLT
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
Query: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
D+K+V +S+IPA NAP KI +P +Q+
Subjt: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
Query: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
E +L R++ ++DNIFAYN+A +I+ E+E EP+S+DE DW +W
Subjt: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
Query: KEAFQ
K+A Q
Subjt: KEAFQ
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| AQY61300.1 Pol [Coffea eugenioides] | 1.2e-36 | 34.75 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
MR+KLP S WGHAILHA +L RIR T+YH YS +QL +G+EPNISHLRIFGC VYVPI PPQR K+ QRRLGIYVG+E PSII+Y+EPLT
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
Query: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
D+K+V +S+IPA NAP KI +P Q+
Subjt: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
Query: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
E +L R++ ++DNIFAYN+A +I+ E+E EP+S+DE DW +W
Subjt: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
Query: KEAFQ
K+A Q
Subjt: KEAFQ
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| KYP47392.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 2.2e-41 | 48.99 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
MR+KLP+S WGHAILHA L RIR TSYHK+S +QL +G +PNISHLRIFGC VYVPI PPQRTKMG QRRLGIYVG+E PSII+YLEPLT
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
Query: --------------DTKKVIESYIPAANAPSKI----KIPIQQVVESVL--RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
+ K++ + IP +I +I I V+ + R +D++FAYN+A N +++ E EPKSI++ DW +WK+A +
Subjt: --------------DTKKVIESYIPAANAPSKI----KIPIQQVVESVL--RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
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| KYP76714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] | 2.2e-38 | 41.98 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPL----------
MR+KLP+S WGHAILHA L RIR TSYHK+S +QL +G +PNISHLRIFGC VYVPI PPQRTKMG QRRLGIYVG+E PSII+YLEPL
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPL----------
Query: -------------------------------------------------------------TDTKKVIESYIPAANAPSKIKIPIQQV---VESVLRQKC
TD K+V +SY+PAANAP ++++P+ QV ES +R K
Subjt: -------------------------------------------------------------TDTKKVIESYIPAANAPSKIKIPIQQV---VESVLRQKC
Query: VVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
A N +++ E EPKSI++ DW +WK+A +
Subjt: VVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151RXV3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-41 | 48.99 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
MR+KLP+S WGHAILHA L RIR TSYHK+S +QL +G +PNISHLRIFGC VYVPI PPQRTKMG QRRLGIYVG+E PSII+YLEPLT
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
Query: --------------DTKKVIESYIPAANAPSKI----KIPIQQVVESVL--RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
+ K++ + IP +I +I I V+ + R +D++FAYN+A N +++ E EPKSI++ DW +WK+A +
Subjt: --------------DTKKVIESYIPAANAPSKI----KIPIQQVVESVL--RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
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| A0A151UBQ7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 1.1e-38 | 41.98 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPL----------
MR+KLP+S WGHAILHA L RIR TSYHK+S +QL +G +PNISHLRIFGC VYVPI PPQRTKMG QRRLGIYVG+E PSII+YLEPL
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPL----------
Query: -------------------------------------------------------------TDTKKVIESYIPAANAPSKIKIPIQQV---VESVLRQKC
TD K+V +SY+PAANAP ++++P+ QV ES +R K
Subjt: -------------------------------------------------------------TDTKKVIESYIPAANAPSKIKIPIQQV---VESVLRQKC
Query: VVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
A N +++ E EPKSI++ DW +WK+A +
Subjt: VVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
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| A0A1U9WY86 Pol | 1.9e-43 | 52.63 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLTD---TKKVI
MR+KLP S WGHAILHA +L RIR T+YH YS +QL +G+EPNISHLRIFGC VYVPI PPQR K+G QRRLGIYVG+E PSII+Y+EPLT T + +
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLTD---TKKVI
Query: -----ESYIPA----ANAPSK---IKIPIQ------QVVESVLRQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
ES+ P N P K KI + + ++ R++ ++DNIFAYN+A +I+ E+E EP+S+DE DW +WK+A Q
Subjt: -----ESYIPA----ANAPSK---IKIPIQ------QVVESVLRQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEWKEAFQ
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| A0A1U9WYB0 Pol | 5.9e-37 | 34.75 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
MR+KLP S WGHAILHA +L RIR T+YH YS +QL +G+EPNISHLRIFGC VYVPI PPQR K+ QRRLGIYVG+E PSII+Y+EPLT
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
Query: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
D+K+V +S+IPA NAP KI +P Q+
Subjt: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
Query: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
E +L R++ ++DNIFAYN+A +I+ E+E EP+S+DE DW +W
Subjt: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
Query: KEAFQ
K+A Q
Subjt: KEAFQ
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| A0A1U9WYD5 Pol | 3.5e-37 | 35.08 | Show/hide |
Query: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
MR+KLP S WGHAILHA +L RIR TSYH YS +QL +G+EPNISHLRIFGC VYVPI P QR K+G QRRLGIYVG+E PSII+Y+EPLT
Subjt: MRAKLPLSVWGHAILHAVSLKRIRTTSYHKYSSVQLAYGHEPNISHLRIFGCIVYVPIFPPQRTKMGSQRRLGIYVGFEFPSIIQYLEPLT---------
Query: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
D+K+V +S+IPA NAP KI +P +Q+
Subjt: -------------------------------------------------------------DTKKVIESYIPAANAPSKIKIPIQQVV------------
Query: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
E +L R++ ++DNIFAYN+A +I+ E+E EP+S+DE DW +W
Subjt: ----------------------------------ESVL--------------------RQKCVVDNIFAYNVAYNILHENEHSEPKSIDE-----DWLEW
Query: KEAFQ
K+A Q
Subjt: KEAFQ
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