; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G09780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G09780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationChr2:9778779..9779849
RNA-Seq ExpressionCSPI02G09780
SyntenyCSPI02G09780
Gene Ontology termsGO:0007034 - vacuolar transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038243.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-15775Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F +SR++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV ++R
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

KAA0049630.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

KAA0049776.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

TYK15990.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

TYK23090.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

TrEMBL top hitse value%identityAlignment
A0A5A7T5N7 Ty3/gypsy retrotransposon protein5.6e-15875Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F +SR++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV ++R
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

A0A5A7U2S1 Ty3/gypsy retrotransposon protein2.1e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

A0A5A7U6J3 Ty3/gypsy retrotransposon protein2.1e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

A0A5D3CXB1 Ty3/gypsy retrotransposon protein2.1e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

A0A5D3DI73 Ty3/gypsy retrotransposon protein2.1e-15774.44Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EELFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEG
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
        HYEFMVM FGLTNA STFQ+LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R++YLGH IS  G+EVDPEKI
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR
          +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLTQLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR

Query:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE
        P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Subjt:  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.1e-7339.06Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTF
        +E  +++ML  G+IR S SPY+SP+ +V KK  +     +R  +DYR LN +T+ ++  IP ++E+  +L     FT I L  G+HQI M    + KT F
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTF

Query:  KTHEGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEV
         T  GHYE++ M FGL NA +TFQ  MN I RP L K  LV+ DDI+++S  L +HL  L  + E L K  L     KC F +    +LGH+++ DG++ 
Subjt:  KTHEGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEV

Query:  DPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLK--IGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGV
        +PEKI  I+ +P+P   +E++ FLGLTGYYRKF+ N+  IA P+T+ LK  +       E   AF +LK  +    +L +PDF   F + ++AS    G 
Subjt:  DPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLK--IGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGV

Query:  VLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFL
        VL  +  P++Y S TL   +      E+EL+A+V A + +  YLLG+ F + +D + L +L
Subjt:  VLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFL

P10401 Retrovirus-related Pol polyprotein from transposon gypsy6.5e-6336.31Show/hide
Query:  VEEMLASGVIRPSTSPYSSPVLLVRKK------DGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTH
        V+++L  G+IRPS SPY+SP  +V KK      + + R  +D+R LN  TIP+++ +P I  +   L  A  FT + LK GYHQI +  +D +KT+F  +
Subjt:  VEEMLASGVIRPSTSPYSSPVLLVRKK------DGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTH

Query:  EGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPE
         G YEF  + FGL NASS FQ  ++ + R  + K   V+ DD++I+S+   DH+ H+  +L+ L    +  +++K  F +  V YLG I+S DG + DPE
Subjt:  EGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPE

Query:  KIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGG------------FKWTEEVQEAFNRLKQAMMTL-LVLALPDFNVSFEIESN
        K+  I+ +P P  V +VR FLGL  YYR F++++  IA P+T +LK                ++ E  + AF RL+  + +  ++L  PDF   F++ ++
Subjt:  KIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGG------------FKWTEEVQEAFNRLKQAMMTL-LVLALPDFNVSFEIESN

Query:  ASGYGFGVVLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFL-VKTDQRSLKF
        AS  G G VL    RPI   S TL   ++     EREL+A+V A+ +   +L G + + + TD + L F
Subjt:  ASGYGFGVVLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFL-VKTDQRSLKF

P20825 Retrovirus-related Pol polyprotein from transposon 2974.2e-7841.83Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTF
        +E  V+EML  G+IR S SPY+SP  +V KK        +R  +DYR LN +TIP+++ IP ++E+  +L     FT I L  G+HQI M    I KT F
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTF

Query:  KTHEGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEV
         T  GHYE++ M FGL NA +TFQ  MN I RP L K  LV+ DDI+I+S  L +HLN ++ +   L    L     KC F +   N+LGHI++ DG++ 
Subjt:  KTHEGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEV

Query:  DPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQ--EAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGV
        +P K+  I ++P+P   +E+R FLGLTGYYRKF+ NY  IA P+T  LK      T++++  EAF +LK  ++   +L LPDF   F + ++AS    G 
Subjt:  DPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQ--EAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGV

Query:  VLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFL
        VL  N  PI++ S TL   +      E+EL+A+V A + +  YLLG++FL+ +D + L++L
Subjt:  VLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFL

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus7.4e-6736.87Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTF
        +ER ++E+L  G+IRPS SPY+SP+ +V KK     +  +R  VD++ LN VTIP+ + IP I      L  A  FT + L  G+HQI M+  DI KT F
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTF

Query:  KTHEGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEV
         T  G YEF+ + FGL NA + FQ +++ I R ++ K   V+ DDI+++S+    H  +LR +L  L K  L  N +K  F  ++V +LG+I++ DG++ 
Subjt:  KTHEGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEV

Query:  DPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLK--IGGFKWT----------EEVQEAFNRLKQAMMTLLVLALPDFNVSFEIE
        DP+K+  I   P P +V+E++ FLG+T YYRKF+Q+Y  +A PLT L +      K +          E   ++FN LK  + +  +LA P F   F + 
Subjt:  DPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLK--IGGFKWT----------EEVQEAFNRLKQAMMTLLVLALPDFNVSFEIE

Query:  SNASGYGFGVVLVHN----QRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFL-VKTDQRSLKFLL
        ++AS +  G VL  +     RPIAY S +L   +      E+E++A++ ++     YL G   + V TD + L F L
Subjt:  SNASGYGFGVVLVHN----QRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFL-VKTDQRSLKFLL

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.1e-6238.66Show/hide
Query:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG
        + ++V+++L +  I PS SP SSPV+LV KKDG++R CVDYR LN  TI + F +P I+ L   +  A IFT + L  GYHQI M   D  KT F T  G
Subjt:  MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEG

Query:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI
         YE+ VM FGL NA STF   M   FR    +FV V+ DDILI+S+  ++H  HL  +LE L+   L   KKKC F      +LG+ I    +     K 
Subjt:  HYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKI

Query:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVL--VHN
          I+ +P P  V++ + FLG+  YYR+F+ N   IA P+ QL      +WTE+  +A ++LK A+    VL   +   ++ + ++AS  G G VL  V N
Subjt:  IVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVL--VHN

Query:  QRP----IAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSL
        +      + Y+S +L    +  P  E EL+ ++ A+  +   L GK F ++TD  SL
Subjt:  QRP----IAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSL

Arabidopsis top hitse value%identityAlignment
ATMG00850.1 DNA/RNA polymerases superfamily protein9.8e-0672.41Show/hide
Query:  EMLASGVIRPSTSPYSSPVLLVRKKDGSW
        EML + +I+PS SPYSSPVLLV+KKDG W
Subjt:  EMLASGVIRPSTSPYSSPVLLVRKKDGSW

ATMG00860.1 DNA/RNA polymerases superfamily protein1.8e-3654.2Show/hide
Query:  LNHLRAILEVLRKNELYANKKKCSFTQSRVNYLG--HIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFK
        +NHL  +L++  +++ YAN+KKC+F Q ++ YLG  HIISG+GV  DP K+  +  WP P N  E+RGFLGLTGYYR+FV+NYG I  PLT+LLK    K
Subjt:  LNHLRAILEVLRKNELYANKKKCSFTQSRVNYLG--HIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFK

Query:  WTEEVQEAFNRLKQAMMTLLVLALPDFNVSF
        WTE    AF  LK A+ TL VLALPD  + F
Subjt:  WTEEVQEAFNRLKQAMMTLLVLALPDFNVSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGATTGGTGGAGGAAATGCTGGCATCAGGAGTAATAAGGCCGAGTACAAGCCCTTATTCCAGTCCCGTATTGTTGGTGAGAAAAAAAGATGGAAGTTGGCGCTT
TTGTGTAGATTACAGGGCTTTAAATAATGTAACCATACCTAATAAGTTTCTGATCCCAGTGATTGAGGAGTTGTTTGATGAGTTGAATGGAGCTACAATTTTCACGAAGA
TTCATCTTAAACCAGGGTACCATCAAATTAGGATGCGTACATATGACATTGACAAGACAACATTCAAAACTCATGAGGGTCACTATGAGTTTATGGTAATGTTGTTTGGA
TTGACCAATGCGTCATCCACTTTCCAATCGTTGATGAACACTATATTCAGACCGTACCTCCGAAAATTCGTATTAGTGTTTTTTGATGATATCTTAATCTATAGTAAGGG
GTTGAAAGATCACTTGAATCATTTGAGAGCAATATTGGAAGTACTGAGGAAGAATGAACTGTATGCTAATAAGAAGAAATGCAGCTTTACTCAGTCTCGAGTAAATTACT
TGGGACATATTATTTCGGGAGATGGAGTTGAGGTGGATCCTGAAAAGATCATAGTTATAAAGGCGTGGCCAGTTCCTGCTAACGTGAGGGAAGTAAGAGGATTTCTTGGG
CTGACTGGATACTATCGCAAGTTTGTCCAGAATTATGGGACAATTGCGGCTCCTTTGACGCAATTATTGAAGATAGGAGGGTTTAAGTGGACAGAAGAAGTTCAAGAAGC
GTTCAATAGGCTGAAACAAGCCATGATGACGCTTCTGGTATTGGCTCTGCCTGATTTTAATGTGTCTTTTGAAATAGAAAGCAATGCTTCTGGATATGGATTTGGGGTTG
TATTAGTACATAACCAACGTCCAATTGCATATTATAGCCATACATTGGCAGTAAGGGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCGGTG
CAAAGATGGTGTCCGTACTTATTGGGAAAGAAGTTTCTAGTCAAGACTGATCAACGGTCCTTAAAGTTTCTGTTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGATTGGTGGAGGAAATGCTGGCATCAGGAGTAATAAGGCCGAGTACAAGCCCTTATTCCAGTCCCGTATTGTTGGTGAGAAAAAAAGATGGAAGTTGGCGCTT
TTGTGTAGATTACAGGGCTTTAAATAATGTAACCATACCTAATAAGTTTCTGATCCCAGTGATTGAGGAGTTGTTTGATGAGTTGAATGGAGCTACAATTTTCACGAAGA
TTCATCTTAAACCAGGGTACCATCAAATTAGGATGCGTACATATGACATTGACAAGACAACATTCAAAACTCATGAGGGTCACTATGAGTTTATGGTAATGTTGTTTGGA
TTGACCAATGCGTCATCCACTTTCCAATCGTTGATGAACACTATATTCAGACCGTACCTCCGAAAATTCGTATTAGTGTTTTTTGATGATATCTTAATCTATAGTAAGGG
GTTGAAAGATCACTTGAATCATTTGAGAGCAATATTGGAAGTACTGAGGAAGAATGAACTGTATGCTAATAAGAAGAAATGCAGCTTTACTCAGTCTCGAGTAAATTACT
TGGGACATATTATTTCGGGAGATGGAGTTGAGGTGGATCCTGAAAAGATCATAGTTATAAAGGCGTGGCCAGTTCCTGCTAACGTGAGGGAAGTAAGAGGATTTCTTGGG
CTGACTGGATACTATCGCAAGTTTGTCCAGAATTATGGGACAATTGCGGCTCCTTTGACGCAATTATTGAAGATAGGAGGGTTTAAGTGGACAGAAGAAGTTCAAGAAGC
GTTCAATAGGCTGAAACAAGCCATGATGACGCTTCTGGTATTGGCTCTGCCTGATTTTAATGTGTCTTTTGAAATAGAAAGCAATGCTTCTGGATATGGATTTGGGGTTG
TATTAGTACATAACCAACGTCCAATTGCATATTATAGCCATACATTGGCAGTAAGGGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCGGTG
CAAAGATGGTGTCCGTACTTATTGGGAAAGAAGTTTCTAGTCAAGACTGATCAACGGTCCTTAAAGTTTCTGTTGGAATAG
Protein sequenceShow/hide protein sequence
MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFG
LTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLG
LTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAV
QRWCPYLLGKKFLVKTDQRSLKFLLE