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CSPI02G10180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G10180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr2:10258597..10260659
RNA-Seq ExpressionCSPI02G10180
SyntenyCSPI02G10180
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61584.1 hypothetical protein Csa_006023 [Cucumis sativus]2.4e-10293.84Show/hide
Query:  MPSSKVQSLLCFGLARTDRLRSMVVDFGGGLFGYASFVLGLYASFYASFVSFVLGLYASFVLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL
        MPSSKVQSL CFGLARTDRLRSMVVDFGG    YASFVLGLYA       SFVLGLYASFVLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL
Subjt:  MPSSKVQSLLCFGLARTDRLRSMVVDFGGGLFGYASFVLGLYASFYASFVSFVLGLYASFVLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL

Query:  KMETGIHGILVVDLEIDSAVDFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLNEHGLVFGLKIGRSNYQLMKS
        +METGIHGILVVDLEIDSAVDFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLNEHGLVFGLKIGRSNYQLMKS
Subjt:  KMETGIHGILVVDLEIDSAVDFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLNEHGLVFGLKIGRSNYQLMKS

Query:  VLGECLGQSLS
        VLGECLGQSLS
Subjt:  VLGECLGQSLS
TrEMBL top hitse value%identityAlignment
A0A0A0LKL1 Uncharacterized protein1.2e-10293.84Show/hide
Query:  MPSSKVQSLLCFGLARTDRLRSMVVDFGGGLFGYASFVLGLYASFYASFVSFVLGLYASFVLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL
        MPSSKVQSL CFGLARTDRLRSMVVDFGG    YASFVLGLYA       SFVLGLYASFVLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL
Subjt:  MPSSKVQSLLCFGLARTDRLRSMVVDFGGGLFGYASFVLGLYASFYASFVSFVLGLYASFVLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL

Query:  KMETGIHGILVVDLEIDSAVDFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLNEHGLVFGLKIGRSNYQLMKS
        +METGIHGILVVDLEIDSAVDFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLNEHGLVFGLKIGRSNYQLMKS
Subjt:  KMETGIHGILVVDLEIDSAVDFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLNEHGLVFGLKIGRSNYQLMKS

Query:  VLGECLGQSLS
        VLGECLGQSLS
Subjt:  VLGECLGQSLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTCCAGCAAGGTTCAGAGCCTTTTATGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGTTGTTGATTTTGGGGGGGGACTATTTGGATATGCTAGTTT
TGTTTTAGGATTGTATGCTAGTTTTTATGCTAGTTTTGTTAGTTTTGTTTTAGGATTGTATGCTAGTTTTGTTTTAGGATTGTATGCTTATTTTATTAATAAGTTGGAAG
ATTTATCTTGTCAGATTTATTCCTCCATCTTTGACCACCAAAATATTGGTGATGGCTGTGAGGTTTTTGATATGGATCTTAAAATGGAGACTGGAATTCATGGTATCTTG
GTGGTTGATCTTGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTGGGCCCCTGGAAATGCTTCTTTCTGGTTCTTGATGTTGACTCAAGCCTCTTGGA
GGAATGCTTACCAGTTCTTGATTTCTTGGAAAGTTCTATGAGGGTTTTGTTGTCTACTTTAACTTTCCAACAAGGTTCCCCAATTTATTGGCTTCTTAATGAGCATGGAC
TTGTTTTTGGACTCAAAATTGGACGCTCCAATTACCAATTAATGAAAAGTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGTCCAGCAAGGTTCAGAGCCTTTTATGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGTTGTTGATTTTGGGGGGGGACTATTTGGATATGCTAGTTT
TGTTTTAGGATTGTATGCTAGTTTTTATGCTAGTTTTGTTAGTTTTGTTTTAGGATTGTATGCTAGTTTTGTTTTAGGATTGTATGCTTATTTTATTAATAAGTTGGAAG
ATTTATCTTGTCAGATTTATTCCTCCATCTTTGACCACCAAAATATTGGTGATGGCTGTGAGGTTTTTGATATGGATCTTAAAATGGAGACTGGAATTCATGGTATCTTG
GTGGTTGATCTTGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTGGGCCCCTGGAAATGCTTCTTTCTGGTTCTTGATGTTGACTCAAGCCTCTTGGA
GGAATGCTTACCAGTTCTTGATTTCTTGGAAAGTTCTATGAGGGTTTTGTTGTCTACTTTAACTTTCCAACAAGGTTCCCCAATTTATTGGCTTCTTAATGAGCATGGAC
TTGTTTTTGGACTCAAAATTGGACGCTCCAATTACCAATTAATGAAAAGTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA
Protein sequenceShow/hide protein sequence
MPSSKVQSLLCFGLARTDRLRSMVVDFGGGLFGYASFVLGLYASFYASFVSFVLGLYASFVLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDLKMETGIHGIL
VVDLEIDSAVDFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLNEHGLVFGLKIGRSNYQLMKSVLGECLGQSLS