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CSPI02G10250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G10250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr2:10299175..10299991
RNA-Seq ExpressionCSPI02G10250
SyntenyCSPI02G10250
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050710.1 hypothetical protein E6C27_scaffold560G00040 [Cucumis melo var. makuwa]7.0e-9088.71Show/hide
Query:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE
        MADFAR T ADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR    QQRRFP GPAFLT  RATAVFLPNR+SSPN IGFEGAE
Subjt:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE

Query:  SVWGN-QISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL
        SVWGN QISPFGRSVFR+GV  PYPPPG++GQYFTNLI M+E GGGDCTKPYINQLEKCLPKVG GGEEDDCRQLYLSKIDLTLKL
Subjt:  SVWGN-QISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL

KAE8651808.1 hypothetical protein Csa_006798 [Cucumis sativus]4.5e-105100Show/hide
Query:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE
        MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE
Subjt:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE

Query:  SVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL
        SVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL
Subjt:  SVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL

KAG6574909.1 hypothetical protein SDJN03_25548, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6370.47Show/hide
Query:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGAT----SRRPVQ--DQQRRFPAGPAFLTAPRATAVFLPNRYS-SPNG
        MA+F R T ADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGA+    SRR  Q   Q  R P GP     PRATA+FLP+RYS  PN 
Subjt:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGAT----SRRPVQ--DQQRRFPAGPAFLTAPRATAVFLPNRYS-SPNG

Query:  IGFEGAESVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKV-GNGGEEDDCRQLYLSKIDLTLKL
        +GF+ AES+W NQ+SPF RS+FREG  + YPPP  +GQY TN  A EE   GDCTKPYINQLEKCLPKV G GGEEDD RQLY SK+DL+L+L
Subjt:  IGFEGAESVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKV-GNGGEEDDCRQLYLSKIDLTLKL

OAY55555.1 hypothetical protein MANES_03G163100v8 [Manihot esculenta]1.3e-1136.11Show/hide
Query:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRP--VQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGN--------------QI
        P +ACRIC+ VF SSQALI HI +H++DE   SRRP  +   QR   A P+   +   T  F PN YS      F+    ++ +              QI
Subjt:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRP--VQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGN--------------QI

Query:  SPFG-RSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLP-KVGNGGEEDDCRQLYLSKIDLTLKL
        S  G R+ +   V  P+PP     Q    ++ ME+    D TKP + QLEK  P K+   G  D+     L  +DLTLKL
Subjt:  SPFG-RSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLP-KVGNGGEEDDCRQLYLSKIDLTLKL

XP_008224336.1 PREDICTED: uncharacterized protein LOC103324080 [Prunus mume]7.1e-1031.68Show/hide
Query:  PLPIP-GSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVF-LPNRYSSPNGIGFEGAESVWGNQIS-----P
        P  +P GS  +ACRICD VF S+QALINHI +H+ D+G T+ R  Q  Q+     P      R+  VF L N ++  N         V  NQI      P
Subjt:  PLPIP-GSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVF-LPNRYSSPNGIGFEGAESVWGNQIS-----P

Query:  FGRSVFREGVAAPYPPP---------GLMGQYF----------TNLIAMEEGGGGDCTKPYINQLEKCLP-------KVGNGGEEDDCRQLYLSKIDLTL
          +  + +   +PY  P         G++G ++            + + E+    DCT P ++QLE+ LP       ++GN GE           +DLTL
Subjt:  FGRSVFREGVAAPYPPP---------GLMGQYF----------TNLIAMEEGGGGDCTKPYINQLEKCLP-------KVGNGGEEDDCRQLYLSKIDLTL

Query:  KL
        KL
Subjt:  KL

TrEMBL top hitse value%identityAlignment
A0A067L769 C2H2-type domain-containing protein1.3e-0930.81Show/hide
Query:  PIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR-----PVQDQQRRFPAGPAF--------------LTAPRATAVFLPNRYSSPNGIGFEGA
        P    P +ACRIC+ VF S+QALI+HI +H+++E + +RR     P    Q   PAG  F              L++P     F PN Y+ P    F+  
Subjt:  PIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR-----PVQDQQRRFPAGPAF--------------LTAPRATAVFLPNRYSSPNGIGFEGA

Query:  ESVWGNQISP-----FGRSVFREGVAAPYPPPGLMGQYFT-----NLIAMEEGGGGDCTKPYINQLEKCLPKVGN--GGEEDDCRQLYLSKIDLTLKL
         S      S        R  F+  +++           F+       + M E   GDCTKP++ QLEK L    N   G  ++  +  L  +DLTLKL
Subjt:  ESVWGNQISP-----FGRSVFREGVAAPYPPPGLMGQYFT-----NLIAMEEGGGGDCTKPYINQLEKCLPKVGN--GGEEDDCRQLYLSKIDLTLKL

A0A0A0LNN3 C2H2-type domain-containing protein1.1e-9198.2Show/hide
Query:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE
        MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE
Subjt:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE

Query:  SVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGE
        SVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKV  G E
Subjt:  SVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGE

A0A2C9W9J2 C2H2-type domain-containing protein6.3e-1236.11Show/hide
Query:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRP--VQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGN--------------QI
        P +ACRIC+ VF SSQALI HI +H++DE   SRRP  +   QR   A P+   +   T  F PN YS      F+    ++ +              QI
Subjt:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRP--VQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGN--------------QI

Query:  SPFG-RSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLP-KVGNGGEEDDCRQLYLSKIDLTLKL
        S  G R+ +   V  P+PP     Q    ++ ME+    D TKP + QLEK  P K+   G  D+     L  +DLTLKL
Subjt:  SPFG-RSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLP-KVGNGGEEDDCRQLYLSKIDLTLKL

A0A2N9E7H8 C2H2-type domain-containing protein3.5e-1033.16Show/hide
Query:  VACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFP--------AGP-----AFLTAPRATAVFLPNR------YSSPNGIGFEGAESVWGNQ
        +ACR+CD VF S+QALINHI +H+ +E ATSR  +Q +  R P        A P     A    PR T     NR       + P    F G   +   +
Subjt:  VACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFP--------AGP-----AFLTAPRATAVFLPNR------YSSPNGIGFEGAESVWGNQ

Query:  ------ISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLY--LSKIDLTLKL
              +SP  R+ F        PP  ++         +EE   GDCTKPY+NQL+  + K+ +  + +D       L+K+DL LKL
Subjt:  ------ISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLY--LSKIDLTLKL

A0A5A7U6B7 C2H2-type domain-containing protein3.4e-9088.71Show/hide
Query:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE
        MADFAR T ADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR    QQRRFP GPAFLT  RATAVFLPNR+SSPN IGFEGAE
Subjt:  MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAE

Query:  SVWGN-QISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL
        SVWGN QISPFGRSVFR+GV  PYPPPG++GQYFTNLI M+E GGGDCTKPYINQLEKCLPKVG GGEEDDCRQLYLSKIDLTLKL
Subjt:  SVWGN-QISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTTCGCCCGACCAACCCCCGCCGATCTCCACCATCTCCGTCCACTTCCAATTCCCGGCAGTCCTCTCGTCGCCTGCCGAATCTGCGACGCTGTCTTTTCCAG
TAGCCAGGCCCTAATTAACCACATCGGAGCTCACGTCTCCGACGAAGGCGCCACCTCCAGACGACCAGTACAGGATCAACAACGACGGTTTCCGGCAGGTCCGGCGTTCT
TAACGGCGCCAAGAGCGACGGCGGTGTTTCTGCCAAACAGATATTCATCCCCTAATGGGATTGGGTTTGAGGGGGCGGAATCGGTTTGGGGAAATCAAATCTCTCCATTC
GGAAGAAGTGTGTTTAGAGAGGGAGTGGCGGCGCCGTATCCTCCGCCGGGCTTGATGGGTCAGTACTTTACGAATTTGATTGCGATGGAGGAGGGAGGAGGGGGTGATTG
TACGAAGCCTTACATAAATCAATTGGAGAAATGTTTGCCGAAAGTGGGGAACGGAGGTGAAGAAGACGACTGCCGTCAACTGTATTTAAGCAAAATAGACCTCACCTTGA
AGCTGTAA
mRNA sequenceShow/hide mRNA sequence
GTCCCGAATTGCTAACTAATTTTGACAATAACATAACTAAGCATTAATTGGTCAAAAACTTAGTTAATTGACACTTCACATAATTAATTTCAAACAATAAAATAAAGTCT
CTATCGTTCATAAATATAATCAACTATTCTCTATTTCATTTTTCATTTTTCATTTTCCCTTTACCTATAAATTCCCTCTCTTTTCCTCTCTTTTTCAATCATCCCTTTCC
TCCTCCTCCTCCCCCTCCCCCATGGCTGATTTCGCCCGACCAACCCCCGCCGATCTCCACCATCTCCGTCCACTTCCAATTCCCGGCAGTCCTCTCGTCGCCTGCCGAAT
CTGCGACGCTGTCTTTTCCAGTAGCCAGGCCCTAATTAACCACATCGGAGCTCACGTCTCCGACGAAGGCGCCACCTCCAGACGACCAGTACAGGATCAACAACGACGGT
TTCCGGCAGGTCCGGCGTTCTTAACGGCGCCAAGAGCGACGGCGGTGTTTCTGCCAAACAGATATTCATCCCCTAATGGGATTGGGTTTGAGGGGGCGGAATCGGTTTGG
GGAAATCAAATCTCTCCATTCGGAAGAAGTGTGTTTAGAGAGGGAGTGGCGGCGCCGTATCCTCCGCCGGGCTTGATGGGTCAGTACTTTACGAATTTGATTGCGATGGA
GGAGGGAGGAGGGGGTGATTGTACGAAGCCTTACATAAATCAATTGGAGAAATGTTTGCCGAAAGTGGGGAACGGAGGTGAAGAAGACGACTGCCGTCAACTGTATTTAA
GCAAAATAGACCTCACCTTGAAGCTGTAAAATGTACCCACACAAAGA
Protein sequenceShow/hide protein sequence
MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPF
GRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL