; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G10340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G10340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCryptochrome-1
Genome locationChr2:10411672..10415331
RNA-Seq ExpressionCSPI02G10340
SyntenyCSPI02G10340
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0006950 - response to stress (biological process)
GO:0009785 - blue light signaling pathway (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0032922 - circadian regulation of gene expression (biological process)
GO:0043153 - entrainment of circadian clock by photoperiod (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0009882 - blue light photoreceptor activity (molecular function)
GO:0016829 - lyase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR002081 - Cryptochrome/DNA photolyase class 1
IPR005101 - Cryptochrome/DNA photolyase, FAD-binding domain
IPR036134 - Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013488.1 Cryptochrome-2 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-9979.28Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSKYDPDGEYIRHWLP+LARMP EWI HPWDAPQ VL+ +GVELGLNYPTPIV+LDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS----------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRN-VQNE
        ANRL EAIIKMREIEAAAGANS GTNEVVMDNADR+QS                      KVP IQ SKV +NPLSRKRSK  EEKGEFQYNIRN VQ+E
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS----------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRN-VQNE

Query:  AGTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        AGTSK D+DLCSTAESSSSKK ST RTSFSVP+FCSSSK LP+SSE  TDR
Subjt:  AGTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

XP_008460640.1 PREDICTED: cryptochrome-1 [Cucumis melo]2.8e-10985.2Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSKYDPDGEYIRHWLP+LARMP EWI HPWDAPQ VLQA+GVELGLNYPTPIVELDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA
        ANRLTEAIIKMREIEAAAGANS GTNEVVMDNADR+QS                     KVPTI NSKV+NNPLSRKRSKAKEEKGEFQYNIR NVQNEA
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA

Query:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        GTSK DDDLCSTAESSSSKK ST RTSFSVP+FCSSSKELPQSSEEHTDR
Subjt:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

XP_022958759.1 cryptochrome-1 [Cucurbita moschata]3.5e-9979.6Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSKYDPDGEYIRHWLP+LARMP EWI HPWDAPQ VL+ +GVELGLNYPTPIV+LDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRN-VQNEA
        ANRL EAIIKMREIEAAAGANS GTNEVVMDNADR+QS                     KVP IQ SKV +NPLSRKRSK  EEKGEFQYNIRN VQ+EA
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRN-VQNEA

Query:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        GTSK D+DLCSTAESSSSKK ST RTSFSVP+FCSSSK LP+SSE  TDR
Subjt:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

XP_038874434.1 cryptochrome-1 isoform X1 [Benincasa hispida]4.5e-10783.27Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSK+DPDGEYIRHWLP+LARMP EWI HPWDAPQ VL A+GVELGLNYPTPIVELDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS----------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNE
        ANRLTEAIIKMREIEAAAGANS GTNEVVMDNADRVQS                      KVPTIQNSKVNNNPLSRKRSKA EEKGEFQYNIR N+Q+E
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS----------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNE

Query:  AGTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        AGTSK+D+DLCSTAESSSSKK ST RTSFSVP+FCSSSKELPQSSEE+TDR
Subjt:  AGTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

XP_038874440.1 cryptochrome-2 isoform X2 [Benincasa hispida]4.5e-10783.27Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSK+DPDGEYIRHWLP+LARMP EWI HPWDAPQ VL A+GVELGLNYPTPIVELDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS----------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNE
        ANRLTEAIIKMREIEAAAGANS GTNEVVMDNADRVQS                      KVPTIQNSKVNNNPLSRKRSKA EEKGEFQYNIR N+Q+E
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS----------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNE

Query:  AGTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        AGTSK+D+DLCSTAESSSSKK ST RTSFSVP+FCSSSKELPQSSEE+TDR
Subjt:  AGTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

TrEMBL top hitse value%identityAlignment
A0A1S3CDD2 cryptochrome-11.4e-10985.2Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSKYDPDGEYIRHWLP+LARMP EWI HPWDAPQ VLQA+GVELGLNYPTPIVELDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA
        ANRLTEAIIKMREIEAAAGANS GTNEVVMDNADR+QS                     KVPTI NSKV+NNPLSRKRSKAKEEKGEFQYNIR NVQNEA
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA

Query:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        GTSK DDDLCSTAESSSSKK ST RTSFSVP+FCSSSKELPQSSEEHTDR
Subjt:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

A0A5D3BQH6 Cryptochrome-11.4e-10985.2Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSKYDPDGEYIRHWLP+LARMP EWI HPWDAPQ VLQA+GVELGLNYPTPIVELDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA
        ANRLTEAIIKMREIEAAAGANS GTNEVVMDNADR+QS                     KVPTI NSKV+NNPLSRKRSKAKEEKGEFQYNIR NVQNEA
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA

Query:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        GTSK DDDLCSTAESSSSKK ST RTSFSVP+FCSSSKELPQSSEEHTDR
Subjt:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

A0A6J1C9D5 cryptochrome-14.0e-9375.2Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSK+DPDGEYIRHWLP+LARMP EWI HPWDAPQ VLQA+GVELGLNYP P+VELDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQ---------------------SKVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRNVQNEAG
          RLTEAI+KMREIEAA GANS GTNEVVMDNAD +Q                      KVPTIQNSKV NNPLSRKRSKA EE+GEF +N +N+ +EAG
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQ---------------------SKVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRNVQNEAG

Query:  TSKADDDLCSTAESSSSKK--LSTKRTSFSVPRFCSSSKELPQSSEEHTD
        TSK+D+DL STAESSSSKK   +T RTSFSVP+FCSSSK  PQSSEE++D
Subjt:  TSKADDDLCSTAESSSSKK--LSTKRTSFSVPRFCSSSKELPQSSEEHTD

A0A6J1H2Z3 cryptochrome-11.7e-9979.6Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSKYDPDGEYIRHWLP+LARMP EWI HPWDAPQ VL+ +GVELGLNYPTPIV+LDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRN-VQNEA
        ANRL EAIIKMREIEAAAGANS GTNEVVMDNADR+QS                     KVP IQ SKV +NPLSRKRSK  EEKGEFQYNIRN VQ+EA
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRN-VQNEA

Query:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        GTSK D+DLCSTAESSSSKK ST RTSFSVP+FCSSSK LP+SSE  TDR
Subjt:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

A0A6J1KWV4 cryptochrome-13.8e-9979.2Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SDILGWQYISGSL DGHELERLDDPQIQGSKYDPDGEYIRHWLP+LARMP EWI HPWDAPQ VL+ +GVELGLNYPTPIV+LDLA
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA
        ANRL E+IIKMREIEAAAGANS GTNEVVMDNADR+QS                     KVP IQ SKV +NPLSRKRSK  EEKGEFQYNIR NVQ+EA
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---------------------KVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIR-NVQNEA

Query:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR
        GTSK D+DLCSTAESSSSKK ST RTSFSVP+FCSSSK LP+SSE  TDR
Subjt:  GTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQSSEEHTDR

SwissProt top hitse value%identityAlignment
A9CJC9 Deoxyribodipyrimidine photo-lyase9.7e-2040.18Show/hide
Query:  KYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLAA
        K+F DTL+DAD  S+   WQ+++GS +D     R+ +P +QG K+D DG+Y+R ++P+L ++  ++I  P++AP++ L+ AGVELG  YP PIV+   A 
Subjt:  KYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLAA

Query:  NRLTEAIIKMRE
         R   A   +++
Subjt:  NRLTEAIIKMRE

P40115 Cryptochrome-17.9e-4670Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+ DI+GWQYISGSL DGHEL+RLD+P IQG+KYDP+GEYIR WLP+LAR+P EWI HPWDAP  VL+A+GVELG NY  PIV +D A
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGA
           LT+AI + RE +   GA
Subjt:  ANRLTEAIIKMREIEAAAGA

Q3IPX9 Cryptochrome DASH8.8e-1338.54Show/hide
Query:  YFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELD
        YF   L+D D+ S+   W Y +G  +D    +R  D + Q  +YD D EYI  WLP+LA +P      PW   +   +  GVELG++YP P+V++D
Subjt:  YFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELD

Q43125 Cryptochrome-13.8e-4039.09Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SD LGWQYI+G+L D  E +R+D+PQ +G K+DP+GEY+R WLP+L+R+P +WI HPW+AP++VLQAAG+ELG NYP PIV LD A
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAA-GANSKGTNEVVMDNADRVQSKVPTIQNSKVNNNPLSRKRSKAKEE-------------KGEFQYNIRNVQNEAGTSKAD--
          RL EA+ +M ++EAA+  A   G+ E + D+A+  ++ +   ++  +     +R     + E               E + +  N++N  G S+A+  
Subjt:  ANRLTEAIIKMREIEAAA-GANSKGTNEVVMDNADRVQSKVPTIQNSKVNNNPLSRKRSKAKEE-------------KGEFQYNIRNVQNEAGTSKAD--

Query:  DDLCSTAESSSSK-KLSTKRTSFSVPRFCSSSKELPQSSEEHT
         ++ +T ++   + + ++ + +  +P F  + + + +S+E+ T
Subjt:  DDLCSTAESSSSK-KLSTKRTSFSVPRFCSSSKELPQSSEEHT

Q96524 Cryptochrome-21.8e-4548.88Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+ DILGWQYISGS+ DGHEL+RLD+P +QG+KYDP+GEYIR WLP+LAR+P EWI HPWDAP  VL+A+GVELG NY  PIV++D A
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---KVPTIQNSKVNNN---PLSRKRSKAKEEKGEFQYNIRNVQNEAGTSKADDDLCSTAESS
           L +AI + RE +   GA     +E+V D+ + + +   K P +  S  +N+   P + + + +K  K E +   R+++   G    + +L STAESS
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---KVPTIQNSKVNNN---PLSRKRSKAKEEKGEFQYNIRNVQNEAGTSKADDDLCSTAESS

Query:  SSKKLSTKRTSFSVPRFCSSSKE
        SS  +      F V + CS + E
Subjt:  SSKKLSTKRTSFSVPRFCSSSKE

Arabidopsis top hitse value%identityAlignment
AT1G04400.1 cryptochrome 21.3e-4648.88Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+ DILGWQYISGS+ DGHEL+RLD+P +QG+KYDP+GEYIR WLP+LAR+P EWI HPWDAP  VL+A+GVELG NY  PIV++D A
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---KVPTIQNSKVNNN---PLSRKRSKAKEEKGEFQYNIRNVQNEAGTSKADDDLCSTAESS
           L +AI + RE +   GA     +E+V D+ + + +   K P +  S  +N+   P + + + +K  K E +   R+++   G    + +L STAESS
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---KVPTIQNSKVNNN---PLSRKRSKAKEEKGEFQYNIRNVQNEAGTSKADDDLCSTAESS

Query:  SSKKLSTKRTSFSVPRFCSSSKE
        SS  +      F V + CS + E
Subjt:  SSKKLSTKRTSFSVPRFCSSSKE

AT1G04400.2 cryptochrome 21.3e-4648.88Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+ DILGWQYISGS+ DGHEL+RLD+P +QG+KYDP+GEYIR WLP+LAR+P EWI HPWDAP  VL+A+GVELG NY  PIV++D A
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---KVPTIQNSKVNNN---PLSRKRSKAKEEKGEFQYNIRNVQNEAGTSKADDDLCSTAESS
           L +AI + RE +   GA     +E+V D+ + + +   K P +  S  +N+   P + + + +K  K E +   R+++   G    + +L STAESS
Subjt:  ANRLTEAIIKMREIEAAAGANSKGTNEVVMDNADRVQS---KVPTIQNSKVNNN---PLSRKRSKAKEEKGEFQYNIRNVQNEAGTSKADDDLCSTAESS

Query:  SSKKLSTKRTSFSVPRFCSSSKE
        SS  +      F V + CS + E
Subjt:  SSKKLSTKRTSFSVPRFCSSSKE

AT3G15620.1 DNA photolyase family protein9.1e-1332.47Show/hide
Query:  LLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLAANRLTEA
        L+D+D   +   W ++S S S  ++  R+  P   G KYDPDG+YIRH+LP L  MP ++I  PW AP +V   A   +G +YP P+V  D A+      
Subjt:  LLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLAANRLTEA

Query:  IIKMREIEAAAGANSKGTNEVVMDNADRVQSKVPTIQNSKVNNNPLSRKRSKAK
            R++  A   N K   +V  +N   ++ K   +Q  +   + +  +R K K
Subjt:  IIKMREIEAAAGANSKGTNEVVMDNADRVQSKVPTIQNSKVNNNPLSRKRSKAK

AT4G08920.1 cryptochrome 12.7e-4139.09Show/hide
Query:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA
        MKYFWDTLLDADL+SD LGWQYI+G+L D  E +R+D+PQ +G K+DP+GEY+R WLP+L+R+P +WI HPW+AP++VLQAAG+ELG NYP PIV LD A
Subjt:  MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLA

Query:  ANRLTEAIIKMREIEAAA-GANSKGTNEVVMDNADRVQSKVPTIQNSKVNNNPLSRKRSKAKEE-------------KGEFQYNIRNVQNEAGTSKAD--
          RL EA+ +M ++EAA+  A   G+ E + D+A+  ++ +   ++  +     +R     + E               E + +  N++N  G S+A+  
Subjt:  ANRLTEAIIKMREIEAAA-GANSKGTNEVVMDNADRVQSKVPTIQNSKVNNNPLSRKRSKAKEE-------------KGEFQYNIRNVQNEAGTSKAD--

Query:  DDLCSTAESSSSK-KLSTKRTSFSVPRFCSSSKELPQSSEEHT
         ++ +T ++   + + ++ + +  +P F  + + + +S+E+ T
Subjt:  DDLCSTAESSSSK-KLSTKRTSFSVPRFCSSSKELPQSSEEHT

AT5G24850.1 cryptochrome 33.1e-0538.46Show/hide
Query:  KYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIE
        ++F   LLD D  S+   W Y +G  +D  E      P+ Q   YDP+GEY+  WL +L R+P E
Subjt:  KYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTATTTTTGGGACACTCTTTTAGATGCAGATTTAAAAAGTGATATCCTTGGTTGGCAATATATTTCTGGAAGTTTATCTGACGGTCATGAGCTTGAGAGATTGGA
CGATCCACAGATTCAAGGCTCCAAATATGATCCAGATGGAGAATATATTAGGCATTGGCTGCCTAAGCTGGCACGAATGCCAATTGAATGGATTCAACACCCTTGGGATG
CACCTCAGAATGTTCTACAAGCTGCAGGAGTTGAGTTAGGTTTGAACTATCCAACACCGATAGTTGAGTTAGATTTGGCTGCTAATCGATTGACAGAAGCCATAATCAAA
ATGCGGGAAATTGAAGCAGCTGCTGGGGCAAACTCAAAAGGTACAAATGAAGTTGTTATGGATAATGCAGATAGGGTTCAATCTAAGGTACCAACAATTCAAAATTCAAA
GGTTAATAATAATCCATTGAGTAGGAAACGGTCTAAAGCCAAGGAAGAGAAAGGAGAATTTCAGTATAATATTCGCAACGTACAAAATGAAGCTGGGACCTCGAAAGCTG
ATGATGATTTATGCTCTACTGCTGAATCTTCATCATCTAAAAAATTATCCACCAAGAGAACTTCCTTTTCTGTTCCACGGTTTTGTTCCTCATCAAAAGAGCTGCCACAA
TCATCTGAAGAACACACTGATAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTATTTTTGGGACACTCTTTTAGATGCAGATTTAAAAAGTGATATCCTTGGTTGGCAATATATTTCTGGAAGTTTATCTGACGGTCATGAGCTTGAGAGATTGGA
CGATCCACAGATTCAAGGCTCCAAATATGATCCAGATGGAGAATATATTAGGCATTGGCTGCCTAAGCTGGCACGAATGCCAATTGAATGGATTCAACACCCTTGGGATG
CACCTCAGAATGTTCTACAAGCTGCAGGAGTTGAGTTAGGTTTGAACTATCCAACACCGATAGTTGAGTTAGATTTGGCTGCTAATCGATTGACAGAAGCCATAATCAAA
ATGCGGGAAATTGAAGCAGCTGCTGGGGCAAACTCAAAAGGTACAAATGAAGTTGTTATGGATAATGCAGATAGGGTTCAATCTAAGGTACCAACAATTCAAAATTCAAA
GGTTAATAATAATCCATTGAGTAGGAAACGGTCTAAAGCCAAGGAAGAGAAAGGAGAATTTCAGTATAATATTCGCAACGTACAAAATGAAGCTGGGACCTCGAAAGCTG
ATGATGATTTATGCTCTACTGCTGAATCTTCATCATCTAAAAAATTATCCACCAAGAGAACTTCCTTTTCTGTTCCACGGTTTTGTTCCTCATCAAAAGAGCTGCCACAA
TCATCTGAAGAACACACTGATAGATGA
Protein sequenceShow/hide protein sequence
MKYFWDTLLDADLKSDILGWQYISGSLSDGHELERLDDPQIQGSKYDPDGEYIRHWLPKLARMPIEWIQHPWDAPQNVLQAAGVELGLNYPTPIVELDLAANRLTEAIIK
MREIEAAAGANSKGTNEVVMDNADRVQSKVPTIQNSKVNNNPLSRKRSKAKEEKGEFQYNIRNVQNEAGTSKADDDLCSTAESSSSKKLSTKRTSFSVPRFCSSSKELPQ
SSEEHTDR