; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G10420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G10420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationChr2:10499242..10499652
RNA-Seq ExpressionCSPI02G10420
SyntenyCSPI02G10420
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651815.1 hypothetical protein Csa_006392, partial [Cucumis sativus]3.6e-4190.57Show/hide
Query:  KTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKK
        KTQTRKATMF KYFLLLLLA VLLTTTQALKHP NSNQE IPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKR      PPYKKYPPYKKRPPYKK
Subjt:  KTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKK

Query:  YPPSSH
        YPPSSH
Subjt:  YPPSSH

NP_001267631.1 uncharacterized protein LOC101210961 precursor [Cucumis sativus]2.1e-3689.8Show/hide
Query:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH
        MF KYFLLLLLA VLLTTTQALKHP NSNQE IPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKR      PPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]5.6e-2672.82Show/hide
Query:  QTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYP
        QT+K  MFLKYFLLLLLA VLLTTTQALKHPS+SNQE+IP TD       TT TDP+EESKF      YKKPY + PY K PPYKKYPPYKK PPYKKYP
Subjt:  QTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYP

Query:  PSS
        PSS
Subjt:  PSS

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]1.6e-4487.5Show/hide
Query:  MRFPIGKTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKK
        MRFP+GKTQT KATMFLKYFLLLLLA VLLTTTQALKHPSNSNQE+IP+TD+THGKLPTTITDPNEESKF+RRPSPYKKPYKR      PPYK+YPPYKK
Subjt:  MRFPIGKTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKK

Query:  RPPYKKYPPSSH
        RPPYKKYPPSSH
Subjt:  RPPYKKYPPSSH

XP_008460638.1 PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo]1.1e-3281.63Show/hide
Query:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALKHPS S+QE+IP+TD+T G LPTTI DPNEESKF+RRP PYKKPYKR      PPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein7.6e-4587.5Show/hide
Query:  MRFPIGKTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKK
        MRFP+GKTQT KATMFLKYFLLLLLA VLLTTTQALKHPSNSNQE+IP+TD+THGKLPTTITDPNEESKF+RRPSPYKKPYKR      PPYK+YPPYKK
Subjt:  MRFPIGKTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKK

Query:  RPPYKKYPPSSH
        RPPYKKYPPSSH
Subjt:  RPPYKKYPPSSH

A0A0A0LNP2 Uncharacterized protein2.6e-4591.07Show/hide
Query:  MRFPIGKTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKK
        MRFPIGKTQTRKATMF KYFLLLLLA VLLTTTQALKHP NSNQE IPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKR      PPYKKYPPYKK
Subjt:  MRFPIGKTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKK

Query:  RPPYKKYPPSSH
        RPPYKKYPPSSH
Subjt:  RPPYKKYPPSSH

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like5.1e-3381.63Show/hide
Query:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALKHPS S+QE+IP+TD+T G LPTTI DPNEESKF+RRP PYKKPYKR      PPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like5.1e-3381.63Show/hide
Query:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALKHPS S+QE+IP+TD+T G LPTTI DPNEESKF+RRP PYKKPYKR      PPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH

Q8H0R6 Proline-rich protein1.0e-3689.8Show/hide
Query:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH
        MF KYFLLLLLA VLLTTTQALKHP NSNQE IPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKR      PPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTCCCAATAGGCAAAACTCAAACTCGAAAAGCCACAATGTTTCTCAAATACTTTCTTCTCCTTCTTCTCGCAGATGTGCTTCTTACCACAACTCAAGCACTGAA
GCATCCCTCCAACTCCAACCAAGAACTTATTCCATCCACCGACCTCACCCACGGAAAGCTCCCGACCACCATCACTGATCCAAACGAAGAATCCAAATTCTTCAGGAGGC
CATCTCCCTACAAGAAACCCTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAGTATCCACCCTATAAGAAACGCCCTCCATACAAGAAGTACCCACCATCT
TCTCACTAA
mRNA sequenceShow/hide mRNA sequence
TGTCCTCAAAACACCTACCTCATTAATGGCAAAAAAAATAACCCCATCTATTGCTCTAAAAGGCCACAAAGTATGAGGTTCCCAATAGGCAAAACTCAAACTCGAAAAGC
CACAATGTTTCTCAAATACTTTCTTCTCCTTCTTCTCGCAGATGTGCTTCTTACCACAACTCAAGCACTGAAGCATCCCTCCAACTCCAACCAAGAACTTATTCCATCCA
CCGACCTCACCCACGGAAAGCTCCCGACCACCATCACTGATCCAAACGAAGAATCCAAATTCTTCAGGAGGCCATCTCCCTACAAGAAACCCTACAAGAGGCCACCCTAC
AAGAAGTATCCACCCTACAAGAAGTATCCACCCTATAAGAAACGCCCTCCATACAAGAAGTACCCACCATCTTCTCACTAA
Protein sequenceShow/hide protein sequence
MRFPIGKTQTRKATMFLKYFLLLLLADVLLTTTQALKHPSNSNQELIPSTDLTHGKLPTTITDPNEESKFFRRPSPYKKPYKRPPYKKYPPYKKYPPYKKRPPYKKYPPS
SH