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CSPI02G10560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G10560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr2:10686906..10687445
RNA-Seq ExpressionCSPI02G10560
SyntenyCSPI02G10560
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61620.1 hypothetical protein Csa_006775 [Cucumis sativus]2.2e-9698.88Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDSDQKLEISNCS+SSS DQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHL
        NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHL
Subjt:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHL

XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]1.6e-2750Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDS+   ++ + SESSSG+Q            D  + + SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  K   SF   S       
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
            I PSTF N P F PLL  S+V+Y  S SN  G        NMN WG+DLSL+I  + GRR +W +G+G+DLELRLGH+
Subjt:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

XP_023000554.1 zinc finger protein GIS-like [Cucurbita maxima]3.3e-2850.55Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDS+   ++S+ SESSS           +E  D  + + SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  K   SF   S  S    
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
              PSTF + P F PLL  S+V+Y+AS SN  G      + NMNLWG DLSL+I  + GRR +W +G+G+DLELRLGH+
Subjt:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]2.1e-2751.9Show/hide
Query:  EATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLLGESQ
        E++++E  D  + + SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  + + SF   S           I PSTF N   F PLL  S+
Subjt:  EATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLLGESQ

Query:  VNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
        V+Y  S SN  G        NMNLWG DLSL+I  + GRR +W +G+G+DLELRLGH+
Subjt:  VNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

XP_038875027.1 zinc finger protein 6-like [Benincasa hispida]7.5e-5773.22Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDSDQKL  S+CSESSS  +LEQ E   ++D       YSD+F + IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK        SSSSSLQS
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPST-FNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
         NQI+GPST FN+IPYFGPLLG SQVNYQAS+SN HG       FNMNLWGSDLSLQIG T GRR+LW NGDGVDLELRLGHH
Subjt:  NNQIIGPST-FNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

TrEMBL top hitse value%identityAlignment
A0A0A0LI91 C2H2-type domain-containing protein1.0e-9698.88Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDSDQKLEISNCS+SSS DQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHL
        NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHL
Subjt:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHL

A0A6J1CE07 transcriptional regulator TAC1-like5.7e-2649.21Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDS++ L   + S+SSS +Q  + EA  K D ++   N          KRSY CIFCKRGFTNAQALGGHMNIHRKDR NKP + + S SS SSSS + S
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGD-------HFNMNLWGSDLSLQIGSTNGRRR---LW-NNGDGVDLELRLGHHH
            I  S F N  YF    G  +V+++ S SN  G        +    LWGSDLSLQI  + GR R   +W NNG+G+DLELRLGH H
Subjt:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGD-------HFNMNLWGSDLSLQIGSTNGRRR---LW-NNGDGVDLELRLGHHH

A0A6J1E9V2 transcriptional regulator SUPERMAN-like6.1e-2043.75Show/hide
Query:  ESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGP-STFNN
        + +S    ++ +    + H H HH+ +DN      KR YEC FCKRGFTNAQALGGHMNIHRKDR  KP   +F+ SSSSS     SN+Q+  P ST  N
Subjt:  ESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGP-STFNN

Query:  IPYFGP----------LLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHH
         PY+ P              S  N+            N  L G+DLSLQI  T G   +W N + VDLELRLGH +
Subjt:  IPYFGP----------LLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHH

A0A6J1EX07 probable transcriptional regulator RABBIT EARS7.9e-2850Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDS+   ++ + SESSSG+Q            D  + + SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  K   SF   S       
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
            I PSTF N P F PLL  S+V+Y  S SN  G        NMN WG+DLSL+I  + GRR +W +G+G+DLELRLGH+
Subjt:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

A0A6J1KKB3 zinc finger protein GIS-like1.6e-2850.55Show/hide
Query:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDS+   ++S+ SESSS           +E  D  + + SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  K   SF   S  S    
Subjt:  MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
              PSTF + P F PLL  S+V+Y+AS SN  G      + NMNLWG DLSL+I  + GRR +W +G+G+DLELRLGH+
Subjt:  NNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.7e-0652.83Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPN-KPPKTSFSFSSSSSSSSLQSN
        RSY C FC+R F +AQALGGHMN+HR+DR   K     + F  SSSS    S+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPN-KPPKTSFSFSSSSSSSSLQSN

Q38895 Transcriptional regulator SUPERMAN2.8e-0650.77Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIP
        RSY C FCKR F +AQALGGHMN+HR+DR     + S    SSSS+ S    N     ST  N P
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIP

Q9LHS9 Probable transcriptional regulator RABBIT EARS4.1e-0548.15Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQ
        RSY C FC R F +AQALGGHMN+HR+DR  +  + S S SS+  ++  + + Q
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQ

Q9SLB8 Zinc finger protein 112.0e-0433.33Show/hide
Query:  SSGDQLEQLEATTKEDHDHDHHNYSDNFNDIII---KRSYECIFCKRGFTNAQALGGHMNIHRKDR-----------------PNKPPKTSFSFSSSSSS
        S+ D+ ++ E       +    N+  N+   +I    ++Y C FC+R F +AQALGGHMN+HR+DR                 P   P  +FS SSSSS+
Subjt:  SSGDQLEQLEATTKEDHDHDHHNYSDNFNDIII---KRSYECIFCKRGFTNAQALGGHMNIHRKDR-----------------PNKPPKTSFSFSSSSSS

Query:  SS
        ++
Subjt:  SS

Q9SR34 Transcriptional regulator TAC11.5e-0760Show/hide
Query:  HDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR
        + H    D+ N     RSY C FC RGF+NAQALGGHMNIHR+DR
Subjt:  HDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 101.2e-0752.83Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPN-KPPKTSFSFSSSSSSSSLQSN
        RSY C FC+R F +AQALGGHMN+HR+DR   K     + F  SSSS    S+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPN-KPPKTSFSFSSSSSSSSLQSN

AT3G09290.1 telomerase activator11.1e-0860Show/hide
Query:  HDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR
        + H    D+ N     RSY C FC RGF+NAQALGGHMNIHR+DR
Subjt:  HDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.5e-1042.19Show/hide
Query:  KRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPST-FNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSD
        +R+Y+C  CKRGFTN QALGGH NIHR++R   P   S S SS S   SL   +Q    ST F N P + P + ES + +Q S   ++  H N   +GS 
Subjt:  KRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPST-FNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSD

Query:  LSLQIGSTNGRRRLWNNGDGVDLELRLG
         S    S  G R  +  G   DL L LG
Subjt:  LSLQIGSTNGRRRLWNNGDGVDLELRLG

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-0935.71Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLS
        R Y C FC+RGF+NAQALGGHMNIHRKDR  K  + +     S  +    S N+         +P+F   +G  +      +    GD    N+      
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLS

Query:  LQIGSTNGRRRLWNNGDGVDLELRLG
        LQ       + L  + D +DLELRLG
Subjt:  LQIGSTNGRRRLWNNGDGVDLELRLG

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein2.3e-1151.43Show/hide
Query:  CSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNK
        C  SSS        +T+ E     H   S +    + +R YEC FCKRGFTNAQALGGHMNIHR+DR NK
Subjt:  CSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGATCAAAAACTAGAAATCAGCAATTGCTCAGAGAGTTCAAGTGGTGATCAATTAGAACAATTAGAAGCAACAACAAAGGAAGATCATGATCATGATCATCA
TAATTATTCAGATAATTTCAACGATATTATTATCAAACGTTCATATGAGTGTATTTTTTGCAAACGTGGATTTACCAACGCTCAAGCTCTTGGAGGCCATATGAATATTC
ATAGAAAAGATAGACCAAATAAACCTCCAAAAACCTCTTTTTCTTTTTCTTCTTCTTCTTCCTCTTCATCACTTCAAAGCAATAATCAAATAATTGGTCCATCCACTTTC
AACAATATCCCCTACTTTGGGCCTCTTTTGGGTGAGTCTCAAGTGAATTATCAAGCATCAACTTCTAACCTACATGGAGATCATTTTAATATGAACCTTTGGGGGTCAGA
TTTGAGCTTACAGATTGGATCGACCAACGGGAGGAGGCGACTTTGGAATAATGGTGATGGTGTTGATTTGGAGCTTCGACTTGGTCATCATCATCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGATCAAAAACTAGAAATCAGCAATTGCTCAGAGAGTTCAAGTGGTGATCAATTAGAACAATTAGAAGCAACAACAAAGGAAGATCATGATCATGATCATCA
TAATTATTCAGATAATTTCAACGATATTATTATCAAACGTTCATATGAGTGTATTTTTTGCAAACGTGGATTTACCAACGCTCAAGCTCTTGGAGGCCATATGAATATTC
ATAGAAAAGATAGACCAAATAAACCTCCAAAAACCTCTTTTTCTTTTTCTTCTTCTTCTTCCTCTTCATCACTTCAAAGCAATAATCAAATAATTGGTCCATCCACTTTC
AACAATATCCCCTACTTTGGGCCTCTTTTGGGTGAGTCTCAAGTGAATTATCAAGCATCAACTTCTAACCTACATGGAGATCATTTTAATATGAACCTTTGGGGGTCAGA
TTTGAGCTTACAGATTGGATCGACCAACGGGAGGAGGCGACTTTGGAATAATGGTGATGGTGTTGATTTGGAGCTTCGACTTGGTCATCATCATCTGTAA
Protein sequenceShow/hide protein sequence
MDSDQKLEISNCSESSSGDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTF
NNIPYFGPLLGESQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHL