CuGenDBv2

Gene ID	CSPI02G11040
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ubiquitin-like-specific protease ESD4 isoform X2
Genome location	Chr2:11283046..11283411
RNA-Seq Expression	CSPI02G11040
Synteny	CSPI02G11040
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006334 - nucleosome assembly (biological process) GO:0006412 - translation (biological process) GO:0006508 - proteolysis (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0008233 - peptidase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]

1.5e-32

75.45

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        M SEYFRYF+ELEND+L EEA  +K+ N+ ERISSLHEDI+DLKKQHKEDL+ LKKGQEEIV LLLS TEVVNQ+L HKCESEKQ  S+E LEKN  P  
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTD
        SLEMIDAD D
Subjt:  SLEMIDADTD

KAA0063839.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.1e-32

76.36

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        M SEYFRYF+ELENDRL EEA  +K+ N+ ERISSLHEDI+DLKKQHKEDL+ LKKGQEEIV LLLS TEVVNQ+L HKCESEKQ  S+E LEKN  P  
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTD
        SLEMIDAD D
Subjt:  SLEMIDADTD

KAE8650946.1 hypothetical protein Csa_001290 [Cucumis sativus]

1.6e-50

93.39

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLS TEVVNQ+LPHKCESEKQ  SEESLEKNH PS 
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTDTNIDQAVAYAT
        SLEMIDAD D+NIDQAVAYAT
Subjt:  SLEMIDADTDTNIDQAVAYAT

KAE8651836.1 hypothetical protein Csa_006724 [Cucumis sativus]

3.5e-50

93.39

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        MSSEYFRYFVELEN RLVEEAYVV DKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLS TEVVN+KLPHKCESEKQ  SEESLEKNH PST
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTDTNIDQAVAYAT
        SLEMIDAD DTNIDQAVAYAT
Subjt:  SLEMIDADTDTNIDQAVAYAT

KAE8653073.1 hypothetical protein Csa_019650, partial [Cucumis sativus]

3.7e-47

89.26

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        MSSEYF+YFVELENDRLVEEAYVVKDKNIVE ISSLHEDIEDLKKQHK+DLDHLKKGQEEIVHLLLS T+VVNQ LPHKCESEKQ  SEESL+KNH PS 
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTDTNIDQAVAYAT
        SLEMID D DTNIDQAVAYAT
Subjt:  SLEMIDADTDTNIDQAVAYAT

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VE89 Protein Ycf2-like

5.5e-33

76.36

Show/hide

Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        M SEYFRYF+ELENDRL EEA  +K+ N+ ERISSLHEDI+DLKKQHKEDL+ LKKGQEEIV LLLS TEVVNQ+L HKCESEKQ  S+E LEKN  P  
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTD
        SLEMIDAD D
Subjt:  SLEMIDADTD

A0A5A7VIA9 Uncharacterized protein

7.2e-33

75.45

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        M SEYFRYF+ELEND+L EEA  +K+ N+ ERISSLHEDI+DLKKQHKEDL+ LKKGQEEIV LLLS TEVVNQ+L HKCESEKQ  S+E LEKN  P  
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTD
        SLEMIDAD D
Subjt:  SLEMIDADTD

A0A5D3C8N2 40S ribosomal protein S15-4

7.2e-33

75.45

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        M SEYFRYF+ELEND+L EEA  +K+ N+ ERISSLHEDI+DLKKQHKEDL+ LKKGQEEIV LLLS TEVVNQ+L HKCESEKQ  S+E LEKN  P  
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTD
        SLEMIDAD D
Subjt:  SLEMIDADTD

A0A5D3CTS8 Uncharacterized protein

1.6e-32

75.45

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Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        M SEYFRYF+ELENDRL EEA  +K++N+ ERISSLHEDI+DLK+QHKEDLD LKKGQEEIV LLLS TEVVNQ+L HKCESEKQ  S++ LEKN  P  
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTD
        SLEMIDAD D
Subjt:  SLEMIDADTD

A0A5D3DFX6 Uncharacterized protein

7.2e-33

75.45

Show/hide

Query:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST
        M SEYFRYF+ELEND+L EEA  +K+ N+ ERISSLHEDI+DLKKQHKEDL+ LKKGQEEIV LLLS TEVVNQ+L HKCESEKQ  S+E LEKN  P  
Subjt:  MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPST

Query:  SLEMIDADTD
        SLEMIDAD D
Subjt:  SLEMIDADTD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCATCTGAGTACTTTCGATATTTTGTGGAGTTAGAAAACGATAGATTGGTTGAAGAAGCATATGTTGTAAAGGATAAAAATATTGTAGAAAGAATATCTTCTTTACA
TGAAGATATTGAAGATTTAAAAAAACAGCACAAAGAAGATTTAGACCACCTGAAAAAAGGACAAGAGGAGATCGTTCATTTGTTACTTTCCCGAACAGAAGTTGTGAATC
AAAAACTTCCACACAAATGTGAAAGTGAAAAACAATCTGAATCTGAAGAGTCCTTGGAAAAGAATCATCTTCCATCAACGAGTCTAGAAATGATAGATGCTGATACTGAT
ACTAACATTGATCAAGCAGTTGCTTATGCAACTTAA

mRNA sequence

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Protein sequence

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MSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHKEDLDHLKKGQEEIVHLLLSRTEVVNQKLPHKCESEKQSESEESLEKNHLPSTSLEMIDADTD
TNIDQAVAYAT

CSPI02G11040 (gene) of Cucumber (PI 183967) v1 genome