; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G11410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G11410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMYB transcription factor
Genome locationChr2:11685398..11686313
RNA-Seq ExpressionCSPI02G11410
SyntenyCSPI02G11410
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651846.1 hypothetical protein Csa_006140 [Cucumis sativus]6.6e-101100Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPH
        GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPH
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPH

Query:  GDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
        GDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
Subjt:  GDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ

KAG6592163.1 Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4863.1Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH
        GKSCRLRWFNQLDPRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN     L+  +    S       +   + 
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH

Query:  PHGDSHGRGGLFGRFWQPKLRNPNNRWD------YNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE
         HG   G GGLF RFW+   +NPNN+W+      +  +LFLR  YQ+S    +F+ N +SKS I FEI  ESVE+KD KFIDFLGVE
Subjt:  PHGDSHGRGGLFGRFWQPKLRNPNNRWD------YNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE

XP_022936691.1 transcription factor MYB117-like [Cucurbita moschata]2.7e-4963.64Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH
        GKSCRLRWFNQLDPRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN     L+  +    S       +   + 
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH

Query:  PHGDSHGRGGLFGRFWQPKLRNPNNRWD------YNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE
         HG   G GGLF RFW+   +NPNN+W+      +  +LFLR  YQ+S    +F+ N RSKS I FEI NE VE+KD KFIDFLGVE
Subjt:  PHGDSHGRGGLFGRFWQPKLRNPNNRWD------YNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE

XP_022975017.1 transcription factor CSA-like [Cucurbita maxima]7.2e-4761.26Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH
        GKSCRLRWFNQLDPRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN     L+  +    S       +   + 
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH

Query:  PHGDSHG---RGGLFGRFWQPKLRNPNNRWDYNL------NLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
         HG   G    GGLF RF   + +NPNN+W+ +L      ++FLR  Y++S    + + N RSKS I FEI NESVE+KD KFIDFLGVE+
Subjt:  PHGDSHG---RGGLFGRFWQPKLRNPNNRWDYNL------NLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ

XP_023535350.1 transcription factor MYB105-like [Cucurbita pepo subsp. pepo]1.8e-5064.25Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSK------
        GKSCRLRWFNQLDPRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS   N S  K    ++ +F + SK      
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSK------

Query:  --LISHPHGDSHGRGGLFGRFWQPKLRNPNNRWDYNL------NLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE
            +  HG   G GGLF RFW+   +NPNN+W+ +L      +LFLR  YQ+S    +F+ N RSKS I FEI NESVE+KD KFIDFLGVE
Subjt:  --LISHPHGDSHGRGGLFGRFWQPKLRNPNNRWDYNL------NLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE

TrEMBL top hitse value%identityAlignment
A0A0A0LKW9 HTH myb-type domain-containing protein4.4e-13599.16Show/hide
Query:  MKIRKEKREEHRIVNTKSLHDLQWESQFVECISLNPKVNFQVADLRHSDERFINYFDDVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWA
        MKIRKEKREEHRIVNTKSLHDLQ ESQFVECISLNPKVNF+VADLRHSDERFINYFDDVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWA
Subjt:  MKIRKEKREEHRIVNTKSLHDLQWESQFVECISLNPKVNFQVADLRHSDERFINYFDDVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWA

Query:  LIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPHGDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSF
        LIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPHGDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSF
Subjt:  LIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPHGDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSF

Query:  RSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
        RSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
Subjt:  RSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ

A0A2G9H6B4 Transcription factor, Myb superfamily2.9e-3344.68Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQ-----------QSNNNNLSTRKKITNSYQQF
        GKSCRLRWFNQLDPRINRRPF+EEEEERLL AH IHGNKWALI+RLFPGRTDNAVKNHWHVIMARKQR+           Q +N+ +S  K  TN    F
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQ-----------QSNNNNLSTRKKITNSYQQF

Query:  VLHSKLISHPHGD--SHGRGGLFGRFWQPKLRNPNNRWDYNLNLF---LRSCYQNSFR---------------------SESFR------PNIRSKSTIK
           +  I   +G   S   GG+F    Q K   P + W  NL+ +   + S +QN+F                      S +F        N   KST+ 
Subjt:  VLHSKLISHPHGD--SHGRGGLFGRFWQPKLRNPNNRWDYNLNLF---LRSCYQNSFR---------------------SESFR------PNIRSKSTIK

Query:  FEILN--------------ESVERKDAKFIDFLGV
           L+              +SV++KD  FIDFLGV
Subjt:  FEILN--------------ESVERKDAKFIDFLGV

A0A6J1F870 transcription factor MYB117-like1.3e-4963.64Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH
        GKSCRLRWFNQLDPRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN     L+  +    S       +   + 
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH

Query:  PHGDSHGRGGLFGRFWQPKLRNPNNRWD------YNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE
         HG   G GGLF RFW+   +NPNN+W+      +  +LFLR  YQ+S    +F+ N RSKS I FEI NE VE+KD KFIDFLGVE
Subjt:  PHGDSHGRGGLFGRFWQPKLRNPNNRWD------YNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVE

A0A6J1IBV4 transcription factor CSA-like3.5e-4761.26Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH
        GKSCRLRWFNQLDPRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN     L+  +    S       +   + 
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN--NNNLSTRKKITNSYQQFVLHSKLISH

Query:  PHGDSHG---RGGLFGRFWQPKLRNPNNRWDYNL------NLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ
         HG   G    GGLF RF   + +NPNN+W+ +L      ++FLR  Y++S    + + N RSKS I FEI NESVE+KD KFIDFLGVE+
Subjt:  PHGDSHG---RGGLFGRFWQPKLRNPNNRWDYNL------NLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ

A0A7J8T164 HTH myb-type domain-containing protein1.3e-3373.33Show/hide
Query:  DVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISH
        D+GKSCRLRWFNQLDPRINRRPFTEEEEERLL AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQR+QS    L  ++    S+Q  ++ SKL   
Subjt:  DVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISH

Query:  PHGDS
        P   S
Subjt:  PHGDS

SwissProt top hitse value%identityAlignment
Q5NBM8 Transcription factor CSA3.4e-3185.92Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS
        GKSCRLRWFNQLDPRINRR FTEEEEERL+ AH  +GNKWALIARLFPGRTDNAVKNHWHV+MAR+ R+QS
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS

Q6R0C4 Transcription factor MYB529.8e-3183.1Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS
        GKSCRLRWFNQLDPRINR PFTEEEEERLL +H IHGN+W++IAR FPGRTDNAVKNHWHVIMAR+ R++S
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS

Q9FX36 Transcription factor MYB541.5e-3164.42Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPH
        GKSCRLRWFNQLDPRINR PFTEEEEERLL AH IHGN+W++IARLFPGRTDNAVKNHWHVIMAR+ RQ S    L +    T S    +   +++    
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPH

Query:  GDSH
        G +H
Subjt:  GDSH

Q9LQX5 Transcription factor MYB1174.4e-3181.94Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN
        GKSCRLRWFNQLDPRINRR FTEEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHV+MARK R+ S+
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN

Q9SEZ4 Transcription factor MYB1051.2e-3183.56Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN
        GKSCRLRWFNQLDPRINRR FTEEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHVIMARK R+QS++
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN

Arabidopsis top hitse value%identityAlignment
AT1G17950.1 myb domain protein 527.0e-3283.1Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS
        GKSCRLRWFNQLDPRINR PFTEEEEERLL +H IHGN+W++IAR FPGRTDNAVKNHWHVIMAR+ R++S
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS

AT1G26780.1 myb domain protein 1173.1e-3281.94Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN
        GKSCRLRWFNQLDPRINRR FTEEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHV+MARK R+ S+
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN

AT1G26780.2 myb domain protein 1173.1e-3281.94Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN
        GKSCRLRWFNQLDPRINRR FTEEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHV+MARK R+ S+
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN

AT1G69560.1 myb domain protein 1058.3e-3383.56Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN
        GKSCRLRWFNQLDPRINRR FTEEEEERL++AH ++GNKWA+IARLFPGRTDN+VKNHWHVIMARK R+QS++
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNN

AT1G73410.1 myb domain protein 541.1e-3264.42Show/hide
Query:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPH
        GKSCRLRWFNQLDPRINR PFTEEEEERLL AH IHGN+W++IARLFPGRTDNAVKNHWHVIMAR+ RQ S    L +    T S    +   +++    
Subjt:  GKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPH

Query:  GDSH
        G +H
Subjt:  GDSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATAAGAAAGGAAAAACGTGAAGAGCACAGAATAGTAAATACAAAGAGTTTACATGATTTACAGTGGGAGAGTCAGTTTGTGGAGTGCATTTCTCTAAACCCTAA
AGTCAACTTTCAAGTAGCAGATTTAAGACACTCCGACGAAAGATTTATTAATTATTTTGATGATGTAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAA
GAATAAACAGAAGACCATTTACAGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGGAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTATTTCCTGGAAGAACT
GATAATGCTGTCAAGAACCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATAATAATCTCTCTACAAGGAAGAAAATTACAAACAGTTATCAACA
ATTTGTCCTCCATTCCAAATTGATCTCTCACCCACACGGTGACAGTCACGGCCGCGGAGGATTGTTCGGCAGATTCTGGCAGCCGAAACTTCGAAACCCTAACAACCGGT
GGGATTATAACTTAAATTTGTTCCTCAGGTCATGCTATCAAAATTCATTCCGTTCAGAGAGTTTTAGACCGAATATTCGATCAAAATCGACGATAAAGTTTGAGATTTTG
AATGAATCTGTTGAGAGGAAGGATGCCAAGTTCATAGATTTTCTTGGGGTTGAGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATAAGAAAGGAAAAACGTGAAGAGCACAGAATAGTAAATACAAAGAGTTTACATGATTTACAGTGGGAGAGTCAGTTTGTGGAGTGCATTTCTCTAAACCCTAA
AGTCAACTTTCAAGTAGCAGATTTAAGACACTCCGACGAAAGATTTATTAATTATTTTGATGATGTAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAA
GAATAAACAGAAGACCATTTACAGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGGAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTATTTCCTGGAAGAACT
GATAATGCTGTCAAGAACCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATAATAATCTCTCTACAAGGAAGAAAATTACAAACAGTTATCAACA
ATTTGTCCTCCATTCCAAATTGATCTCTCACCCACACGGTGACAGTCACGGCCGCGGAGGATTGTTCGGCAGATTCTGGCAGCCGAAACTTCGAAACCCTAACAACCGGT
GGGATTATAACTTAAATTTGTTCCTCAGGTCATGCTATCAAAATTCATTCCGTTCAGAGAGTTTTAGACCGAATATTCGATCAAAATCGACGATAAAGTTTGAGATTTTG
AATGAATCTGTTGAGAGGAAGGATGCCAAGTTCATAGATTTTCTTGGGGTTGAGCAGTGAGTTCAAAAAAATATTTTATGTTTAATTTGATTATATATAGAGAGAGGCCA
TGAGAAAAATTAG
Protein sequenceShow/hide protein sequence
MKIRKEKREEHRIVNTKSLHDLQWESQFVECISLNPKVNFQVADLRHSDERFINYFDDVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRT
DNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHPHGDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEIL
NESVERKDAKFIDFLGVEQ