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CSPI02G11540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G11540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationChr2:11849830..11854065
RNA-Seq ExpressionCSPI02G11540
SyntenyCSPI02G11540
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-5778.43Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIK SDLSSKSISFGQ  KLAI+RKCS+TNHKLSVRA+Y+DGGR  +GGG+FVAGF LGGAVFGTL+Y+FAPQIRR +LNE+E+GF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE
        RRA+RP+YYD   DGLE TR+TLN KI QL SAIDNVSSRL+GG K P +PVE
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE

XP_004145361.2 uncharacterized protein LOC101208760 [Cucumis sativus]2.5e-8399.38Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
        RRAKRPVYYDEG DGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV

XP_008459202.1 PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo]2.3e-6081.41Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIK SDLSSKS+SFGQT KLAIRRKCSKTNHKLSVRA+Y+DGGR  SGGGDFVAGF LGGAVFGTL+Y+FAPQIRR +LNE+EHGF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD
        RRAKRP+YYDE   GLE TR+TLNAKI QL SAIDNVSSRL+GG   P +PVEE +
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD

XP_011650090.1 uncharacterized protein LOC101222662 [Cucumis sativus]2.0e-7793.21Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAAC APSLSVSGGLIK SDLSSKSISFGQ  KLAIRRKCSKTNHKLSV A+Y+DGGRSGSGGGDFVAGFFLGGAVFGTL++VFAPQ+RRFLLNENEHGF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
        RRAKRPVYYDEG DGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]6.2e-5879.74Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIK SDLSSKSISFGQT KLAI+RKCS+TNHKLSVRA+Y+DGGR  SGGG+FVAGF LGGAVFGTL+Y+FAPQIRR +LNE+E+GF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE
        RRA+RP+YYD   DGLE TR+TLN KI QL SAIDNVSSRL+GG K P +PVE
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE

TrEMBL top hitse value%identityAlignment
A0A0A0LNE4 Uncharacterized protein9.9e-7893.21Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAAC APSLSVSGGLIK SDLSSKSISFGQ  KLAIRRKCSKTNHKLSV A+Y+DGGRSGSGGGDFVAGFFLGGAVFGTL++VFAPQ+RRFLLNENEHGF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
        RRAKRPVYYDEG DGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV

A0A0A0LNY8 Uncharacterized protein1.2e-8399.38Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
        RRAKRPVYYDEG DGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV

A0A1S3C9M4 uncharacterized protein LOC1034983951.1e-6081.41Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIK SDLSSKS+SFGQT KLAIRRKCSKTNHKLSVRA+Y+DGGR  SGGGDFVAGF LGGAVFGTL+Y+FAPQIRR +LNE+EHGF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD
        RRAKRP+YYDE   GLE TR+TLNAKI QL SAIDNVSSRL+GG   P +PVEE +
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD

A0A5D3CQ66 Uncharacterized protein1.1e-6081.41Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIK SDLSSKS+SFGQT KLAIRRKCSKTNHKLSVRA+Y+DGGR  SGGGDFVAGF LGGAVFGTL+Y+FAPQIRR +LNE+EHGF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD
        RRAKRP+YYDE   GLE TR+TLNAKI QL SAIDNVSSRL+GG   P +PVEE +
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPD

A0A6J1FVP6 uncharacterized protein LOC1114488979.6e-5777.78Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MAACFAPSLSVSGGLIK SDLSSKSISFGQ  KLAI+RKCS+T+HKLSVRA+Y+DGGR  +GGG+FVAGF LGGAVFGTL+Y+FAPQIRR +LNE+E+GF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE
        RRA+RP+YYD   DGLE TR+TLN KI QL SAIDNVSSRL+GG K P +PVE
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.3.8e-1340.68Show/hide
Query:  SISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGHDGLEATRETLN
        S+SFG      +     +T   L++++ Y D   SGS  G FV GF LGG + G L  V+APQI + +   +     R      YDE    LE TR+ L 
Subjt:  SISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGHDGLEATRETLN

Query:  AKIKQLGSAIDNVSSRLK
         KI QL SAID+VSS+LK
Subjt:  AKIKQLGSAIDNVSSRLK

AT3G02900.1 unknown protein7.6e-3050.62Show/hide
Query:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF
        MA+  A  +S SG     +  +  +I   ++S L ++ K S  +HKLSV A Y  GG  G G  DFV GF LG AVFGTL+Y+FAPQIRR +L+ENE+GF
Subjt:  MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGF

Query:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGK-------KKPPLPVE
        ++ ++P+YYDE   GLE  RE LN KI QL SAID VSSRLKGG+         P +PVE
Subjt:  RRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGK-------KKPPLPVE

AT3G02900.2 unknown protein4.4e-3056.49Show/hide
Query:  QTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGHDGLEATRETLNAKIKQ
        ++S L ++ K S  +HKLSV A Y  GG  G G  DFV GF LG AVFGTL+Y+FAPQIRR +L+ENE+GF++ ++P+YYDE   GLE  RE LN KI Q
Subjt:  QTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYDEGHDGLEATRETLNAKIKQ

Query:  LGSAIDNVSSRLKGGK-------KKPPLPVE
        L SAID VSSRLKGG+         P +PVE
Subjt:  LGSAIDNVSSRLKGGK-------KKPPLPVE

AT5G16660.1 unknown protein1.2e-3255.49Show/hide
Query:  MAACFAPS-LSVSG----GLIKPSDLS--SKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLL
        MA+C A + LS+SG      +K + LS  +K  S  +TS L I +K ++T  K SV A Y DG RSGS  GDF+AGF LGGAVFG ++Y+FAPQIRR +L
Subjt:  MAACFAPS-LSVSG----GLIKPSDLS--SKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLL

Query:  N-ENEHGFRRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPP---LPVE
        N E+E+GF + K+P YYDE   GLE TRETLN KI QL SAIDNVSSRL+G +K      +PVE
Subjt:  N-ENEHGFRRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPP---LPVE

AT5G16660.2 unknown protein1.5e-3054.88Show/hide
Query:  MAACFAPS-LSVSG----GLIKPSDLS--SKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLL
        MA+C A + LS+SG      +K + LS  +K  S  +TS L I +K ++T  K SV A   DG RSGS  GDF+AGF LGGAVFG ++Y+FAPQIRR +L
Subjt:  MAACFAPS-LSVSG----GLIKPSDLS--SKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLL

Query:  N-ENEHGFRRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPP---LPVE
        N E+E+GF + K+P YYDE   GLE TRETLN KI QL SAIDNVSSRL+G +K      +PVE
Subjt:  N-ENEHGFRRAKRPVYYDEGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPP---LPVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTGCTTTGCTCCATCGCTCTCCGTATCTGGGGGATTGATCAAGCCCTCGGATCTCTCTTCAAAGTCCATTTCCTTTGGGCAAACATCAAAACTCGCCATCCG
GAGGAAGTGTTCGAAAACCAACCACAAGTTATCAGTCCGTGCTGATTACGATGATGGTGGTAGAAGTGGAAGTGGAGGTGGTGATTTTGTTGCCGGGTTTTTTCTTGGGG
GTGCTGTATTTGGAACCTTATCTTATGTTTTTGCTCCCCAGATAAGGAGATTTTTACTAAATGAAAATGAGCATGGTTTTAGGAGGGCTAAGCGCCCAGTATACTACGAC
GAAGGTCACGATGGTCTTGAGGCAACGAGAGAGACATTGAATGCAAAAATAAAACAATTGGGTTCAGCGATTGATAATGTATCATCACGTTTGAAAGGTGGAAAAAAGAA
ACCACCTCTCCCAGTTGAAGAACCTGATCGGTGGGCTCAAGGTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCTGCTTTGCTCCATCGCTCTCCGTATCTGGGGGATTGATCAAGCCCTCGGATCTCTCTTCAAAGTCCATTTCCTTTGGGCAAACATCAAAACTCGCCATCCG
GAGGAAGTGTTCGAAAACCAACCACAAGTTATCAGTCCGTGCTGATTACGATGATGGTGGTAGAAGTGGAAGTGGAGGTGGTGATTTTGTTGCCGGGTTTTTTCTTGGGG
GTGCTGTATTTGGAACCTTATCTTATGTTTTTGCTCCCCAGATAAGGAGATTTTTACTAAATGAAAATGAGCATGGTTTTAGGAGGGCTAAGCGCCCAGTATACTACGAC
GAAGGTCACGATGGTCTTGAGGCAACGAGAGAGACATTGAATGCAAAAATAAAACAATTGGGTTCAGCGATTGATAATGTATCATCACGTTTGAAAGGTGGAAAAAAGAA
ACCACCTCTCCCAGTTGAAGAACCTGATCGGTGGGCTCAAGGTGTGTAA
Protein sequenceShow/hide protein sequence
MAACFAPSLSVSGGLIKPSDLSSKSISFGQTSKLAIRRKCSKTNHKLSVRADYDDGGRSGSGGGDFVAGFFLGGAVFGTLSYVFAPQIRRFLLNENEHGFRRAKRPVYYD
EGHDGLEATRETLNAKIKQLGSAIDNVSSRLKGGKKKPPLPVEEPDRWAQGV