; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G12010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G12010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransposase
Genome locationChr2:12278673..12279612
RNA-Seq ExpressionCSPI02G12010
SyntenyCSPI02G12010
Gene Ontology termsNA
InterPro domainsIPR004242 - Transposon, En/Spm-like
IPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047739.1 transposase [Cucumis melo var. makuwa]8.0e-12170.19Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS
        MDK WMHKSRLSK+YELGVE+FI FGFSNT++SYIRCPCLKCGNCEKHSRK VRDHLYVNGIDESYKIWFWHG+     SFY ESSKF  HTCE++DVGS
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS

Query:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA
        VKEIIEVAHEEYSKDP GFEKLLIDAEKPLYEGCK                                K+ LPTTNELPNSL EAKKTLGALGMEYE+IHA
Subjt:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA

Query:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS
        CPNNCCLYRKEFANA ECPECGQSRWKNVKD NE RKQ PSK                          H++ERI DGKLRHP DSPAWKLVD KW DFGS
Subjt:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS

Query:  EPRNLRLTLSAD
        EPRNLRL LS D
Subjt:  EPRNLRLTLSAD

XP_031739753.1 uncharacterized protein LOC116403284 [Cucumis sativus]2.3e-12875.4Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS
        MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKF IHTCED  VGS
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS

Query:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK---------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH
        VKE+IEV HEEYSK+PTGFEKLLIDAEKPLYEGCK                                 K+ LPTTNELPNSL EAKKTLGALGMEYEKIH
Subjt:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK---------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH

Query:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG
        ACPNNCCLYRKEF+NAIECPECGQSRWKNVKDTNERRKQIPSK                          HSTERIND KLRH    PAWKLVDMKW DFG
Subjt:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG

Query:  SEPRNLRLTLSAD
         EPRNLRL LSAD
Subjt:  SEPRNLRLTLSAD

XP_031739988.1 uncharacterized protein LOC116403337 [Cucumis sativus]1.3e-13477.64Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCED-DDVG
        MDKSWMHKSRLSKDYELGVENFIKFGFSNT+SSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKF IHTCED  DVG
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCED-DDVG

Query:  SVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH
        SVKE+IEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK                                K+ LPTTNELPNSL EAKKTLGALGMEYEKIH
Subjt:  SVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH

Query:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG
        ACPNNCCLYRKEFANAIECPECGQSRWKN+KDTNERRKQIPSK                          HSTERINDGKLRHP DSPAWKLVDMKW DFG
Subjt:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG

Query:  SEPRNLRLTLSAD
        SEPRNLRL LSAD
Subjt:  SEPRNLRLTLSAD

XP_031742172.1 uncharacterized protein LOC116404095 [Cucumis sativus]1.3e-13176.28Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS
        MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEK++R+GVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKF IHTCEDDDVGS
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS

Query:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA
        VKE+IEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK                                K+ LPTTNELPNSL EAKKTLGALGMEYEKIHA
Subjt:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA

Query:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS
        CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQI SK                          HSTERINDGKLRHP +SPAWKLVDMKW DF S
Subjt:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS

Query:  EPRNLRLTLSAD
        EPRNL L LS D
Subjt:  EPRNLRLTLSAD

XP_031742381.1 uncharacterized protein LOC116404332 [Cucumis sativus]1.4e-13377.24Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS
        MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKF IHTCED DVGS
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS

Query:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA
        VKE+IEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK                                K+ +P TNELPNSL EAKKTLGALGMEYEKIHA
Subjt:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA

Query:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS
        CPNNCCLYRKEFANAIEC ECGQSRWKNVKDTNERRKQIPSK                          HSTERINDGKLRHP DSPAWKLVDMKW DFGS
Subjt:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS

Query:  EPRNLRLTLSAD
        EP NLRL LSAD
Subjt:  EPRNLRLTLSAD

TrEMBL top hitse value%identityAlignment
A0A5A7TUX7 Transposase3.0e-10562.3Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGE-ELPNSSFYDESSKFAIHTCEDDDVG
        MD+SWMHKSRL KDYELGVENFI FGFSNT  + IRCPCLKCGNCEK SR  +RDHLYVNGIDESYKIWFWHGE +LP SS Y+ESSKF  H  E +DVG
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGE-ELPNSSFYDESSKFAIHTCEDDDVG

Query:  SVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH
         + E+IEVAHEEYSKDP  FEKLL DAEK LYEGCK                                K+ LPT NE+P S+ EAKKTLGALGM YEKIH
Subjt:  SVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH

Query:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG
        ACPN+CCLYRKE ANA ECPECG+SRWK   + NE +KQIP K                          HS ER+  GKLRHP DSPAWKL+D+KW DFG
Subjt:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG

Query:  SEPRNLRLTLSAD
        SEPRN+RL LSAD
Subjt:  SEPRNLRLTLSAD

A0A5A7U2S8 Transposase3.9e-12170.19Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS
        MDK WMHKSRLSK+YELGVE+FI FGFSNT++SYIRCPCLKCGNCEKHSRK VRDHLYVNGIDESYKIWFWHG+     SFY ESSKF  HTCE++DVGS
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS

Query:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA
        VKEIIEVAHEEYSKDP GFEKLLIDAEKPLYEGCK                                K+ LPTTNELPNSL EAKKTLGALGMEYE+IHA
Subjt:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA

Query:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS
        CPNNCCLYRKEFANA ECPECGQSRWKNVKD NE RKQ PSK                          H++ERI DGKLRHP DSPAWKLVD KW DFGS
Subjt:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS

Query:  EPRNLRLTLSAD
        EPRNLRL LS D
Subjt:  EPRNLRLTLSAD

A0A5D3BVS7 Transposase3.0e-10562.3Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGE-ELPNSSFYDESSKFAIHTCEDDDVG
        MD+SWMHKSRL KDYELGVENFI FGFSNT  + IRCPCLKCGNCEK SR  +RDHLYVNGIDESYKIWFWHGE +LP SS Y+ESSKF  H  E +DVG
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGE-ELPNSSFYDESSKFAIHTCEDDDVG

Query:  SVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH
         + E+IEVAHEEYSKDP  FEKLL DAEK LYEGCK                                K+ LPT NE+P S+ EAKKTLGALGM YEKIH
Subjt:  SVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIH

Query:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG
        ACPN+CCLYRKE ANA ECPECG+SRWK   + NE +KQIP K                          HS ER+  GKLRHP DSPAWKL+D+KW DFG
Subjt:  ACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFG

Query:  SEPRNLRLTLSAD
        SEPRN+RL LSAD
Subjt:  SEPRNLRLTLSAD

A0A5D3CA82 Transposase3.5e-9868.25Show/hide
Query:  LKCGNCE-KHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGSVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK---
        L C  C+  HSRK VRDHLYVNGIDESYKIWFWHGE LPNSSFY E SKF  HTCE++DVGSVKE+IEVAHEEYSKDP GFEKLLIDAEKPLYEGCK   
Subjt:  LKCGNCE-KHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGSVKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK---

Query:  -----------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQ
                                     K+ LPTTNELPNSL EAKKTLGALGMEYEKIHACPNNCCLYRKEFANA ECPECGQSRWKNVKD NE RKQ
Subjt:  -----------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQ

Query:  IPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGSEPRNLRLTLSAD
        IPSK                          H++ERI DGKLRHP DSPAWKLVD KW DFGSEPRNLRL LSAD
Subjt:  IPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGSEPRNLRLTLSAD

A0A5D3CRI9 Transposase2.3e-10561.86Show/hide
Query:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS
        MD SWMHKSRLSKDY LGVENFI FGFSNT  + IRCPCLK GNCEK SR  +RDHLYVNGIDESYKIWFWHGE+LP SS Y+ESSKF  H  E++DVGS
Subjt:  MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGS

Query:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA
        + E+IEVAHEEYSKDP  FEKLL DA+KPLYEGCK                                K+  PT+NE+P S+ EAKKTLGALGM YEKIHA
Subjt:  VKEIIEVAHEEYSKDPTGFEKLLIDAEKPLYEGCK--------------------------------KKFLPTTNELPNSLCEAKKTLGALGMEYEKIHA

Query:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS
        CPN+CCLYRKE ANA ECPECG+SRWK   + N  +KQIP K                           S ER+ DGKLRHP DSPAWKL+D+KW DFGS
Subjt:  CPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSK--------------------------HSTERINDGKLRHPTDSPAWKLVDMKWSDFGS

Query:  EPRNLRLTLSAD
        EPRN+RL LSAD
Subjt:  EPRNLRLTLSAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAATCTTGGATGCACAAGAGTAGATTGTCTAAAGATTATGAGTTGGGTGTGGAAAACTTCATCAAATTTGGATTTTCTAATACAACTAGCTCCTATATTCGTTG
TCCTTGTTTGAAATGTGGGAATTGTGAAAAACATAGTAGAAAGGGTGTTAGAGATCACTTGTATGTTAATGGTATTGATGAAAGTTATAAAATTTGGTTTTGGCATGGGG
AAGAACTTCCTAACTCATCCTTCTATGATGAATCTTCAAAGTTTGCCATTCATACATGTGAAGATGATGATGTTGGAAGTGTAAAAGAAATTATTGAAGTTGCTCATGAG
GAGTATTCAAAAGACCCAACTGGATTTGAGAAGTTGCTTATTGATGCTGAAAAACCATTGTACGAAGGATGCAAAAAGAAATTCTTGCCTACTACCAATGAGCTTCCGAA
TTCATTGTGTGAAGCAAAGAAAACATTAGGTGCATTAGGAATGGAATACGAAAAGATTCATGCATGCCCGAATAATTGTTGTCTCTATAGAAAAGAATTTGCTAATGCAA
TTGAATGTCCTGAATGTGGTCAATCAAGGTGGAAAAACGTCAAGGATACAAATGAAAGGAGAAAGCAAATTCCCTCTAAACATTCTACTGAAAGAATTAATGATGGTAAG
TTACGACATCCAACAGACTCTCCAGCATGGAAGTTAGTAGACATGAAATGGTCAGACTTCGGTTCTGAACCCAGAAATCTTCGTTTAACATTGTCAGCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAATCTTGGATGCACAAGAGTAGATTGTCTAAAGATTATGAGTTGGGTGTGGAAAACTTCATCAAATTTGGATTTTCTAATACAACTAGCTCCTATATTCGTTG
TCCTTGTTTGAAATGTGGGAATTGTGAAAAACATAGTAGAAAGGGTGTTAGAGATCACTTGTATGTTAATGGTATTGATGAAAGTTATAAAATTTGGTTTTGGCATGGGG
AAGAACTTCCTAACTCATCCTTCTATGATGAATCTTCAAAGTTTGCCATTCATACATGTGAAGATGATGATGTTGGAAGTGTAAAAGAAATTATTGAAGTTGCTCATGAG
GAGTATTCAAAAGACCCAACTGGATTTGAGAAGTTGCTTATTGATGCTGAAAAACCATTGTACGAAGGATGCAAAAAGAAATTCTTGCCTACTACCAATGAGCTTCCGAA
TTCATTGTGTGAAGCAAAGAAAACATTAGGTGCATTAGGAATGGAATACGAAAAGATTCATGCATGCCCGAATAATTGTTGTCTCTATAGAAAAGAATTTGCTAATGCAA
TTGAATGTCCTGAATGTGGTCAATCAAGGTGGAAAAACGTCAAGGATACAAATGAAAGGAGAAAGCAAATTCCCTCTAAACATTCTACTGAAAGAATTAATGATGGTAAG
TTACGACATCCAACAGACTCTCCAGCATGGAAGTTAGTAGACATGAAATGGTCAGACTTCGGTTCTGAACCCAGAAATCTTCGTTTAACATTGTCAGCCGATTGA
Protein sequenceShow/hide protein sequence
MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYDESSKFAIHTCEDDDVGSVKEIIEVAHE
EYSKDPTGFEKLLIDAEKPLYEGCKKKFLPTTNELPNSLCEAKKTLGALGMEYEKIHACPNNCCLYRKEFANAIECPECGQSRWKNVKDTNERRKQIPSKHSTERINDGK
LRHPTDSPAWKLVDMKWSDFGSEPRNLRLTLSAD