; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G12190 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G12190
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich RNA-binding protein-like
Genome locationChr2:12476901..12478657
RNA-Seq ExpressionCSPI02G12190
SyntenyCSPI02G12190
Gene Ontology termsGO:0006858 - extracellular transport (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:1990428 - miRNA transport (biological process)
GO:0050688 - regulation of defense response to virus (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005615 - extracellular space (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0035198 - miRNA binding (molecular function)
GO:0035197 - siRNA binding (molecular function)
GO:0005198 - structural molecule activity (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 - RNA recognition motif domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61837.2 hypothetical protein Csa_006347 [Cucumis sativus]1.4e-6595.91Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
        GGGGYGGRRDGGGFSRGGGGGYG       GGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
Subjt:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

QGZ19397.1 small RNA binding protein 1 [Cucumis sativus]6.7e-6393.57Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNR   
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
         GGGYGGRRDGGGFSRGGGGGYG       GGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
Subjt:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

XP_004148845.3 glycine-rich RNA-binding protein 1 [Cucumis sativus]2.2e-69100Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
        GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
Subjt:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

XP_008460935.1 PREDICTED: glycine-rich RNA-binding protein 1-like [Cucumis melo]5.2e-5588.51Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MASSSVE+RCFVGGLAWATDSN+LEKAFS +G+IVEAKIVSDRETGRSRGFGFVTF EE+AMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGG    GG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
        GGGGYGGRRD   GGGFSR GGGGYGGGGGG   GGGGGYGGGRDRGYGGGGGYGGGRD+RG GGGGSEGGWRN
Subjt:  GGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

XP_023006868.1 glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita maxima]1.6e-4883.05Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR--GGGGGGGYNRG
        MASSSVE+RCFVGGLAWATD+++LEKAFS +GEIVEAKIV+DRETGRSRGFGFVTF++EEAMRSAIEAMNG  LDGR+ITVNEAQQR  GGGGGGGYNRG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR--GGGGGGGYNRG

Query:  GGGGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSR-GSGGGGSEGGWRN
        GGGGGGYGGRR+   GGG++R GGGGYGGGGGG   GGGGGYGGGRDRGYGGGGG  GGR  R G GGGGSEGGWRN
Subjt:  GGGGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSR-GSGGGGSEGGWRN

TrEMBL top hitse value%identityAlignment
A0A0A0LLY1 Small RNA binding protein 13.3e-6393.57Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNR   
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
         GGGYGGRRDGGGFSRGGGGGYG       GGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
Subjt:  GGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

A0A1S3CE16 glycine-rich RNA-binding protein 1-like2.5e-5588.51Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MASSSVE+RCFVGGLAWATDSN+LEKAFS +G+IVEAKIVSDRETGRSRGFGFVTF EE+AMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGG    GG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
        GGGGYGGRRD   GGGFSR GGGGYGGGGGG   GGGGGYGGGRDRGYGGGGGYGGGRD+RG GGGGSEGGWRN
Subjt:  GGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

A0A6J1G631 glycine-rich RNA-binding protein 1-like1.7e-4883.24Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR-GGGGGGGYNRGG
        MASSSVE+RCFVGGLAWATD+++LEKAFS +GEIVEAKIV+DRETGRSRGFGFVTF++EEAMRSAIEAMNG  LDGR+ITVNEAQQR GGGGGGGYNRGG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR-GGGGGGGYNRGG

Query:  GGGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSR-GSGGGGSEGGWRN
        GGGGGYGGRR+GGG     GGG  GGGGGGY  GGGGYGGGRDRGYGGGGG  GGR  R G GGGGSEGGWRN
Subjt:  GGGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSR-GSGGGGSEGGWRN

A0A6J1JGK0 glycine-rich RNA-binding protein-like5.6e-4781.25Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNR---
        MASSSVE+RCFVGGLAWATD+++LEKAFS +GEIVEAKIV+DRETGRSRGFGFVTF+EE++MRSAIEAMNG  LDGR+ITVNEAQQRGGGGGGGYNR   
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNR---

Query:  GGGGGGGYGGRRD--GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
        GGGGGGGYGGRR+  GGG++RGGGG   GGGGGGY  GGGGYGGGRDRGYGGG   GG R +RG GGGGSEGGWRN
Subjt:  GGGGGGGYGGRRD--GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

A0A6J1L652 glycine-rich RNA-binding protein 1-like isoform X17.8e-4983.05Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR--GGGGGGGYNRG
        MASSSVE+RCFVGGLAWATD+++LEKAFS +GEIVEAKIV+DRETGRSRGFGFVTF++EEAMRSAIEAMNG  LDGR+ITVNEAQQR  GGGGGGGYNRG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR--GGGGGGGYNRG

Query:  GGGGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSR-GSGGGGSEGGWRN
        GGGGGGYGGRR+   GGG++R GGGGYGGGGGG   GGGGGYGGGRDRGYGGGGG  GGR  R G GGGGSEGGWRN
Subjt:  GGGGGGYGGRRD---GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSR-GSGGGGSEGGWRN

SwissProt top hitse value%identityAlignment
P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein3.4e-3366.09Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MA++ VE+RCFVGGLAWAT + SLE AF+ YGEI+++K+++DRETGRSRGFGFVTF  E +M  AIE MNG  LDGRNITVN+AQ RGGGGGGG   GG 
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRDGGGFSRGGGGGYGG---GGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
        GGGGYGG R  GG+  GGGGGYGG   GGGGGY GGGGGYGG R+   GGGGGYGGG            GGWR+
Subjt:  GGGGYGGRRDGGGFSRGGGGGYGG---GGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN

P49311 Glycine-rich RNA-binding protein GRP2A3.1e-3469.23Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGG-------GGGG
        MAS  VE+RCFVGGLAWATD  SLE AFS +GE+V++KI++DRETGRSRGFGFVTF +E++M+ AIE MNG  LDGR+ITVNEAQ RG        GGGG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGG-------GGGG

Query:  GYNRG---GGGGGGY-GGRRDGGGFSRGGGGGYG--GGGGGGYGGG----GGGYGGGRDRGYGGGGGYG
        GY  G   GGGGGGY GGRR+GGG+S GGGGGY   GGGGGGYGGG    GGGYGGG   GYGGGGG G
Subjt:  GYNRG---GGGGGGY-GGRRDGGGFSRGGGGGYG--GGGGGGYGGG----GGGYGGGRDRGYGGGGGYG

Q03250 Glycine-rich RNA-binding protein 71.7e-3264.44Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGG-
        MAS  VE+RCFVGGLAWATD  +LE AF+ YG+++++KI++DRETGRSRGFGFVTF +E+AM+ AIE MNG  LDGR+ITVNEAQ RG GGGGG+  GG 
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGG-

Query:  -----GGGGGY---GGRRDGGGFSRGGGGGYGGGGGG--GYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGW
             GGGGGY   GG   GGG  R GGGGY GGGGG    GGGGG YGGGR     GGGGYGGG +  G GG G  GGW
Subjt:  -----GGGGGY---GGRRDGGGFSRGGGGGYGGGGGG--GYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGW

Q03878 Glycine-rich RNA-binding protein6.8e-3468.05Show/hide
Query:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGG----
        + VE+RCFVGGLAWAT+  SLE+AFS +G+I ++KI++DRETGRSRGFGFVTF +E++MR AIE MNG  LDGRNITVNEAQ RG GGGGG   GG    
Subjt:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGG----

Query:  GGGGGYGGRRDGGGFSRGGGGGYGG---GGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGS
        GGGGGYGGRR+G     GGGGGYGG   GGGGGYGGGGGGYGG R+   GG GGYGG       GGGGS
Subjt:  GGGGGYGGRRDGGGFSRGGGGGYGG---GGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGS

Q43472 Glycine-rich RNA-binding protein blt8011.7e-3266.67Show/hide
Query:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGGGG
        + VE+RCFVGGL WATD  SL+ AFS YG+++++KI++DRETGRSRGFGFVTF  +EAMR AIEAMNG  LDGRNITVNEAQ R   GGGG+   GGGGG
Subjt:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGGGG

Query:  GYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGG-WR
        GYGG+R       GGGGGY GGGGGGYGGG  G GGG     GGGGGYGGG    G   GGS GG WR
Subjt:  GYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGG-WR

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 21.2e-3364.44Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGG-
        MAS  VE+RCFVGGLAWATD  +LE AF+ YG+++++KI++DRETGRSRGFGFVTF +E+AM+ AIE MNG  LDGR+ITVNEAQ RG GGGGG+  GG 
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGG-

Query:  -----GGGGGY---GGRRDGGGFSRGGGGGYGGGGGG--GYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGW
             GGGGGY   GG   GGG  R GGGGY GGGGG    GGGGG YGGGR     GGGGYGGG +  G GG G  GGW
Subjt:  -----GGGGGY---GGRRDGGGFSRGGGGGYGGGGGG--GYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGW

AT2G21660.2 cold, circadian rhythm, and rna binding 23.7e-3569.18Show/hide
Query:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG
        MAS  VE+RCFVGGLAWATD  +LE AF+ YG+++++KI++DRETGRSRGFGFVTF +E+AM+ AIE MNG  LDGR+ITVNEAQ RG GGGGG+ RGGG
Subjt:  MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGG

Query:  GGGGYGGRRDGGGFSRGGGGGYG--GGGGGGYGG----GGGGYGGGRDRGYGGGGGYGG
          GG GGRR+GGG   GGGGGY   GGGGG YGG    GGGGYGGG   GYGG GG GG
Subjt:  GGGGYGGRRDGGGFSRGGGGGYG--GGGGGGYGG----GGGGYGGGRDRGYGGGGGYGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.2e-2864.37Show/hide
Query:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGGGG
        S VE+RCFVGGLAWAT+   L++ FS +G+++++KI++DRE+GRSRGFGFVTF +E+AMR AIE MNG  LDGR ITVNEAQ RG GGGGG  RGG GGG
Subjt:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGGGG

Query:  GYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGY---GGGRDRGYGG-----GGGYGGGRDSRGSGGGGSEGGW
           G   GGG+S GGGGGY GGGGGGY    GGY   GGG  RGYGG     GGGYGGG D    GGGG  GGW
Subjt:  GYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGY---GGGRDRGYGG-----GGGYGGGRDSRGSGGGGSEGGW

AT4G39260.2 cold, circadian rhythm, and RNA binding 13.6e-3064.44Show/hide
Query:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGGGG
        S VE+RCFVGGLAWAT+   L++ FS +G+++++KI++DRE+GRSRGFGFVTF +E+AMR AIE MNG  LDGR ITVNEAQ RG GGGGG  RGG    
Subjt:  SSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGGGG

Query:  GYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYG
               GGG+  GGGGGY GGGGGGY GGGGG G
Subjt:  GYGGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYG

AT5G61030.1 glycine-rich RNA-binding protein 34.6e-1754.76Show/hide
Query:  RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR---GGGGGGGYNRGGGGGGGY
        + F+GG+A++ D +SL +AF+ YGE+V+ +++ DRETGRSRGFGFVTF   EA  SAI+A++G  L GR + VN A  R   GG GGGGY  GGGG GG 
Subjt:  RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQR---GGGGGGGYNRGGGGGGGY

Query:  GGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYG--GGGGYGGGRDSRGSGGG--GSEGGW
        GG   G G   GG GGYGGG GG  G  GGGYGG    GYG  G GGYGG     G  GG  GS GG+
Subjt:  GGRRDGGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYG--GGGGYGGGRDSRGSGGG--GSEGGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCTCTGTTGAGTTCCGTTGCTTTGTGGGTGGCCTTGCTTGGGCCACTGATAGTAATTCCTTAGAGAAGGCGTTTTCCGTATATGGTGAAATCGTTGAAGC
CAAGATCGTTAGCGATCGTGAGACCGGAAGGTCGAGAGGATTTGGATTCGTCACGTTTCTTGAGGAAGAGGCCATGAGAAGTGCCATTGAAGCGATGAATGGTCATATTC
TCGACGGACGTAATATTACCGTTAACGAGGCGCAGCAAAGAGGTGGAGGAGGTGGTGGTGGATACAACCGTGGAGGTGGCGGTGGAGGTGGTTACGGTGGACGTCGTGAC
GGCGGAGGATTTAGCCGTGGTGGTGGTGGAGGATACGGAGGTGGTGGTGGTGGTGGATACGGAGGAGGTGGTGGTGGTTACGGTGGAGGACGTGACCGTGGTTACGGTGG
TGGAGGTGGTTACGGTGGTGGACGTGACTCCAGGGGAAGTGGTGGCGGTGGATCTGAAGGTGGATGGAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATCACACCGCCTTTTAAGTTAACCCTGATTTACAAAACAACCGCGTTTGTTCAATTTCCAGCAAACCCTAAAACTAACCCTAGTTACTTCTCCCCTTCTATATAAGAAAC
CCTAAACTTCTTCTCCATTTCATTCATTCTACACTTCCATTACGGTTCTTTTCCTTCTCGTTCCCATGGCTTCCTCCTCTGTTGAGTTCCGTTGCTTTGTGGGTGGCCTT
GCTTGGGCCACTGATAGTAATTCCTTAGAGAAGGCGTTTTCCGTATATGGTGAAATCGTTGAAGCCAAGATCGTTAGCGATCGTGAGACCGGAAGGTCGAGAGGATTTGG
ATTCGTCACGTTTCTTGAGGAAGAGGCCATGAGAAGTGCCATTGAAGCGATGAATGGTCATATTCTCGACGGACGTAATATTACCGTTAACGAGGCGCAGCAAAGAGGTG
GAGGAGGTGGTGGTGGATACAACCGTGGAGGTGGCGGTGGAGGTGGTTACGGTGGACGTCGTGACGGCGGAGGATTTAGCCGTGGTGGTGGTGGAGGATACGGAGGTGGT
GGTGGTGGTGGATACGGAGGAGGTGGTGGTGGTTACGGTGGAGGACGTGACCGTGGTTACGGTGGTGGAGGTGGTTACGGTGGTGGACGTGACTCCAGGGGAAGTGGTGG
CGGTGGATCTGAAGGTGGATGGAGAAATTAGGCGGGGTTTTATGATTTCTTTTTAGCTTTTGGGTTCGAAATATTAGTGTGATGATGATAAGAAAAATCTTAGCAGGATC
TTTTCTTTCGTTTTCATTTTGTGGCTTTGTTCCTGTTCTGTTTGGGTGCTCTCTTTTTTGACCGATTACCGATGGGTTTCGTGTTCCGATCAATGTTACCGATGATGAAA
AAAATTACATAAGAAAATGAAGTACAGATCTTCGTTCTCGCACATCATTTCTTTCTTTTTTTCAATCTTCAAATATCCATCATTGAAATTTTCGCCATGGTCAAGATATT
CTTCTATAAAAAATTGAATATCAAAAGCAATTCAACTTTTTCTTCGTAGCGGTAGTATTAAATATTTTCCTTGTTTTGGGGAAAAATGGATGGTTGGATGTTGTTTCGTT
TTGATCCAATTGTGACAGCTTCAAAAATAAATATCTTGGTAGATATTTTCAATTGTTAGAGATAAATTTAATGGAATAATTTTGGCTTTATTGTGTGGGCCCACGATGGG
TCGGCCATGTTGGGGAATCTGAATAATAATTTCTCGGAATATTCGCTTTCATAGTAATGTATTTTGTCGTTTTGTTGTGAACGTGGGAATATTGTGGGCCTCTGCTTTGG
TGACTTCTCACATGGGCCTGACTATTGGGCCGCGTTTTGAGTTGAAAAGTTGATTATCTTTATATCTTGTCAGATTCTATAATTATTTTGTTGCGTTATTTGTATGCTTT
TAATATTAATAAATTATATCCCTTTATAGTGAATTTATTTGTACAAGGGAG
Protein sequenceShow/hide protein sequence
MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGGGGGYGGRRD
GGGFSRGGGGGYGGGGGGGYGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN