CuGenDBv2

Gene ID	CSPI02G12460
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein CASPARIAN STRIP INTEGRITY FACTOR 1
Genome location	Chr2:12704860..12706721
RNA-Seq Expression	CSPI02G12460
Synteny	CSPI02G12460
Gene Ontology terms	GO:0010039 - response to iron ion (biological process) GO:0010447 - response to acidic pH (biological process) GO:0055072 - iron ion homeostasis (biological process) GO:2000067 - regulation of root morphogenesis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0048226 - Casparian strip (cellular component)
InterPro domains	IPR038974 - Protein Casparian strip integrity factor 1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460971.1 PREDICTED: uncharacterized protein LOC103499698 [Cucumis melo]

5.2e-38

93.41

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_011649242.1 protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus]

7.7e-42

100

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_022146128.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1 [Momordica charantia]

9.8e-29

77.78

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+DG+RK  GEME+ IHERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_022986650.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Cucurbita maxima]

2.8e-28

80.22

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Query:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MF KYKL F+ F LLLSTSF STICIAGRPSKLV EVV   GVVHE  KR TR EME+ +HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Subjt:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

XP_038902215.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Benincasa hispida]

5.2e-38

94.44

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVA GGVVHED KRKTRGEME+ IHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ22 Uncharacterized protein

3.7e-42

100

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A1S3CEV9 uncharacterized protein LOC103499698

2.5e-38

93.41

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A5A7TUS0 Uncharacterized protein

2.5e-38

93.41

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A6J1CXR3 protein CASPARIAN STRIP INTEGRITY FACTOR 1

4.7e-29

77.78

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+DG+RK  GEME+ IHERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

A0A6J1JEM0 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like

1.4e-28

80.22

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Query:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MF KYKL F+ F LLLSTSF STICIAGRPSKLV EVV   GVVHE  KR TR EME+ +HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Subjt:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

SwissProt top hits

e value

%identity

Alignment

O65684 Protein CASPARIAN STRIP INTEGRITY FACTOR 2

2.4e-09

43.48

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FI  LL+S S  + +C AGR S L+       PEVV +   +HE              HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

Q84MD2 Protein CASPARIAN STRIP INTEGRITY FACTOR 1

4.0e-09

47.06

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FIF +++S S LS +  AGRPS  V + +           R+   E     HERLLR+NTKDYG   PSP   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

Arabidopsis top hits

e value

%identity

Alignment

AT2G16385.1 unknown protein

2.9e-10

47.06

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FIF +++S S LS +  AGRPS  V + +           R+   E     HERLLR+NTKDYG   PSP   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

AT4G34600.1 unknown protein

1.7e-10

43.48

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FI  LL+S S  + +C AGR S L+       PEVV +   +HE              HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

Sequences

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CDS sequence

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ATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTCTTATCTACCATCTGCATTGCAGGTCGACCATCAAAGTTGGTTCCTGAGGTTGT
TGCTAAGGGTGGAGTTGTGCATGAGGATGGAAAGAGGAAGACAAGAGGTGAAATGGAAGAGATCATCCATGAAAGACTCTTGAGGGTAAACACCAAAGACTATGGAAGAT
ATGATCCATCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAA

mRNA sequence

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ATCACTTTTGTCCAATAATCCAATGTCCCTTAAATCATACATAAGGAAGCTTCATTTGGGTCTATGCTCTTAGGAAGAAGAAGAAGAAAGAAGAAGAAGAAAGAAAAGAA
AAGAAAAGAAAGACCCAACTTCAAAAAAACATATAAAAGTGGTCATATCATTTATAAGGTTGTTTCTACTTTCTATCATATTTTTGAGAATCATGTTTCTTAAGTACAAG
CTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTCTTATCTACCATCTGCATTGCAGGTCGACCATCAAAGTTGGTTCCTGAGGTTGTTGCTAAGGGTGGAGTTGT
GCATGAGGATGGAAAGAGGAAGACAAGAGGTGAAATGGAAGAGATCATCCATGAAAGACTCTTGAGGGTAAACACCAAAGACTATGGAAGATATGATCCATCCCCAGCCT
TTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAATAAGGGCACAAAAACAAATATCATCACCAACGTGGGGAGTAACCTTATAAACATATATAAATAATATGAAAAAGT
AATATGATGTGTTTCATGTAGTGTAAGTATAATATATATGTATTAATCATATATATAATATATAGTGTATAATATATATGGTCATAGACTCACATATATATGAATATAAA
GCCTTTGTGATGTTTTGCTTCAGTTACTAAGTACTATATATATATATATATATTGTTATATATTGTGTATTTTGGAATATAGGTTGCTTTATATGATTAATTATGCTCCA
TTTTTCTAATACTACTTTGCTCCCC

Protein sequence

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MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

CSPI02G12460 (gene) of Cucumber (PI 183967) v1 genome