| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 0.0e+00 | 84.34 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
MN+SIVQLLASEKLNGDNY+AWKSNLNTILVVDDLRFVLTEECPQ PA NANRT R+AYDRW+KAN+KARVYILASM+DVLAKKH+S+ATAK IMDSLR
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQP WSLRHEA+K+IYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSF+PFQTNASLNKIEFNLTTLLNELQRFQNLT+ KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLVEYEN
K+VEANVA TKRKFIRGSSSK K GPSK AQ+KKKGKGK P +K KK A+KGKC+HC Q+GHW RNCPKYLAEKKAEK TQGKYDLLVVETCLVE +
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLVEYEN
Query: CTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGI
TWILDSGATNHICFSFQE SSWKKL EGE TLKVGTGE+VSA AVGDL LFF+DRY+ILK+VLYVP MKRNLISI+CILE +Y ISFE+NE F+ KGI
Subjt: CTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGI
Query: LVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAK
+CSAI E+NLYKLRPTRAN VLNTE+FRT ETQNK+QKVSSNAYLWHLRLGHINLNRI RLVKSG+L+ LEDNSLPPCESCLEGKMTKRSFTGKGLRAK
Subjt: LVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAK
Query: GPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPST
PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+HHKS S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYLIE GIQSQLSAPST
Subjt: GPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPST
Query: PQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPK
PQQNGVSERRNRTLLDMVRSM+S++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPK
Subjt: PQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPK
Query: ESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVHQPDRYLGLIET-----
ESRGGLFY PQENK+FVSTNATFLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK S QSH SQ+LR P+RSGRVVHQP+RYLGL+ET
Subjt: ESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVHQPDRYLGLIET-----
Query: -----------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSI
QAM DVDRDQWIKAM+LEMESMYFNSVWTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSI
Subjt: -----------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSI
Query: RILLSIATFYDYE
RILLSIATFY+YE
Subjt: RILLSIATFYDYE
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SMH8 Gag/pol protein | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| A0A5A7TWB9 Gag/pol protein | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| A0A5D3CPJ6 Gag/pol protein | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| A0A5D3CSZ6 Gag/pol protein | 0.0e+00 | 66.74 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
M S+ + +LA++KLNG+NYA+WK+ +NT+L++DDLRFVL EECPQ PA+NA RT R+ Y+RW KANEKAR YILAS+S+VLAKKHES+ TA+EIMDSL+
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQ + ++H+A+KYIY RM EG SVREHVL+MM+HFN+AE+NG I+E +QVSFILESLP+SF+ F++NA +NKI + LTTLLNELQ F++L KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
++ EANVAT+ RKF RGS+S TK+ PS N + KKK G+ K N K A KG C+HC Q GHW RNCPKYLAEKK K QGKYDLLV+ET
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKP-NAQIKKKGKGKTPKQNKG------KKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVET
Query: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
CLVE ++ WI+DSGATNH+C SFQ SSW++L GE T++VGTG +VSA AVG L+L + +++L+NV VP +KRNLIS+ C+LEQ Y ++F +N+
Subjt: CLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEA
Query: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
F++ G+ +CSA LE+NLY LR + +LNTE+F+TA TQNKR K+S NA+LWHLRLGHINLNRI RLVK+GLLS LE+NSLP CESCLEGKMTKR
Subjt: FVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVS--SNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS
Query: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
FTGKG RAK PLELVHSDLCGPMNVKARGG+EYFI+F DDYSRYG++YL+ HKS +LEKFKEYKAEVEN L KTIK RSDRGGEYMDL+F++YL+E GI
Subjt: FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGI
Query: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
SQLSAP TPQQNGVSERRNRTLLDMVRSM+S++ + +SFWGYA++TA YILN VPSKSVSETP +LW GRKGSLRHFRIWGCPAHVL NPKKLE RSK
Subjt: QSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
Query: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
LC F+GYPK +RGG FYDP++NK+FVSTNATFLEEDHIR+H+PRSK+VL E+SK +++PS+ T+VV S+++H Q LREP+RSGRV +
Subjt: LCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKS-------AIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVH
Query: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
P RY+ L ET +AM+DVD+D+WIKAM+LE+ESMYFNSVW LVDQP+ VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG
Subjt: QPDRYLGLIET----------------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG
Query: VDYEETFSPVAMLKSIRILLSIATFYDYE
VDYEETFSPVAMLKSIRILLSIA ++DYE
Subjt: VDYEETFSPVAMLKSIRILLSIATFYDYE
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| E2GK51 Gag/pol protein (Fragment) | 0.0e+00 | 84.34 | Show/hide |
Query: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
MN+SIVQLLASEKLNGDNY+AWKSNLNTILVVDDLRFVLTEECPQ PA NANRT R+AYDRW+KAN+KARVYILASM+DVLAKKH+S+ATAK IMDSLR
Subjt: MNSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRG
Query: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
MFGQP WSLRHEA+K+IYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSF+PFQTNASLNKIEFNLTTLLNELQRFQNLT+ KG
Subjt: MFGQPEWSLRHEAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTMGKG
Query: KQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLVEYEN
K+VEANVA TKRKFIRGSSSK K GPSK AQ+KKKGKGK P +K KK A+KGKC+HC Q+GHW RNCPKYLAEKKAEK TQGKYDLLVVETCLVE +
Subjt: KQVEANVATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYDLLVVETCLVEYEN
Query: CTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGI
TWILDSGATNHICFSFQE SSWKKL EGE TLKVGTGE+VSA AVGDL LFF+DRY+ILK+VLYVP MKRNLISI+CILE +Y ISFE+NE F+ KGI
Subjt: CTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGI
Query: LVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAK
+CSAI E+NLYKLRPTRAN VLNTE+FRT ETQNK+QKVSSNAYLWHLRLGHINLNRI RLVKSG+L+ LEDNSLPPCESCLEGKMTKRSFTGKGLRAK
Subjt: LVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAK
Query: GPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPST
PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+HHKS S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYLIE GIQSQLSAPST
Subjt: GPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPST
Query: PQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPK
PQQNGVSERRNRTLLDMVRSM+S++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPK
Subjt: PQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPK
Query: ESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVHQPDRYLGLIET-----
ESRGGLFY PQENK+FVSTNATFLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK S QSH SQ+LR P+RSGRVVHQP+RYLGL+ET
Subjt: ESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSSQSHPSQQLREPQRSGRVVHQPDRYLGLIET-----
Query: -----------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSI
QAM DVDRDQWIKAM+LEMESMYFNSVWTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSI
Subjt: -----------QAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSI
Query: RILLSIATFYDYE
RILLSIATFY+YE
Subjt: RILLSIATFYDYE
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.8e-75 | 24.47 | Show/hide |
Query: NGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAV
+G+ YA WK + +L D+ V+ P + D W KA A+ I+ +SD S TA++I+++L ++ + + +
Subjt: NGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAV
Query: KYIYTKRMKEGTSVRE--HVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSF----IPFQTNASLN-KIEFNLTTLLNELQRFQNLTMGKGKQVEANV
K + + ++ S+ H+ D ++ +A G IEE++++S +L +LP + +T + N + F LL++ + +N K+V +
Subjt: KYIYTKRMKEGTSVRE--HVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSF----IPFQTNASLN-KIEFNLTTLLNELQRFQNLTMGKGKQVEANV
Query: ATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLA---------EKKAEKETQGKYDLLVVETCLVE-
+ + K + +KP K K K KC+HCG+ GH ++C Y EK+ + T +V E
Subjt: ATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLA---------EKKAEKETQGKYDLLVVETCLVE-
Query: YENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGT---GEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAF
+NC ++LDSGA++H+ + S + E LK+ GE + A+ G ++L D + L++VL+ + NL+S+ + E I F+ +
Subjt: YENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGT---GEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAF
Query: VFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLE-----DNSLPPCESCLEGKMTK
+ G++V + + +LN + + K +N LWH R GHI+ ++ + + + S + S CE CL GK +
Subjt: VFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLE-----DNSLPPCESCLEGKMTK
Query: RSFTGKGLR----AKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDY
F K L+ K PL +VHSD+CGP+ YF+ F+D ++ Y YLI +KS+ F+++ A+ E + L D G EY+ R +
Subjt: RSFTGKGLR----AKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDY
Query: LIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVLVQN
++ GI L+ P TPQ NGVSER RT+ + R+M+S +++ SFWG A+ TA Y++N +PS+++ S+TPYE+W +K L+H R++G +V ++N
Subjt: LIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVLVQN
Query: PK-KLEHRSKLCFFIGY-------------------------------------------PKESRGGLFYDPQENKIFVST----------NATFLEE--
+ K + +S F+GY KES F P +++ + T N FL++
Subjt: PK-KLEHRSKLCFFIGY-------------------------------------------PKESRGGLFYDPQENKIFVST----------NATFLEE--
Query: -----------------------------DHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSSQSHPSQQLRE---------------PQRSGRV
++D + +K L E K D + +K +S +S ++ L+E +RS R+
Subjt: -----------------------------DHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSSQSHPSQQLRE---------------PQRSGRV
Query: VHQP-------DRYLGLIETQA---MKDV-----------DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
+P D L + A DV D+ W +A++ E+ + N+ WT+ +P + + +W++ K + G +KARLVA+
Subjt: VHQP-------DRYLGLIETQA---MKDV-----------DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
Query: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYD
G+TQ+ +DYEETF+PVA + S R +LS+ Y+
Subjt: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYD
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.4e-100 | 29.45 | Show/hide |
Query: KLNGDN-YAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRH
K NGDN ++ W+ + +L+ L VL + + A + W +E+A I +SD + TA+ I L ++ + +
Subjt: KLNGDN-YAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRH
Query: EAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNL-----TTLLNELQRFQNLTMGKGKQVEAN
K +Y M EGT+ H+ G IEE ++ +L SLP S+ T K L LLNE R + G+ E
Subjt: EAVKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNL-----TTLLNELQRFQNLTMGKGKQVEAN
Query: VATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYD-----LLV-----VETCLV
R + R S++ ++G A+ K K + K+ +N CY+C Q GH+ R+CP +K + ET G+ + +V V +
Subjt: VATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKETQGKYD-----LLV-----VETCLV
Query: EYENC--------TWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFR-DRYVILKNVLYVPQMKRNLISISCILEQMYRIS
E E C W++D+ A++H + + + ++ T+K+G + +GD+ + ++LK+V +VP ++ NLIS + Y S
Subjt: EYENC--------TWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFR-DRYVILKNVLYVPQMKRNLISISCILEQMYRIS
Query: FEINEAFVFYKG-ILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGK
+ N+ + KG +++ + LY+ N EI + E + ++S + LWH R+GH++ + L K L+S + ++ PC+ CL GK
Subjt: FEINEAFVFYKG-ILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGK
Query: MTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
+ SF R L+LV+SD+CGPM +++ GG +YF++FIDD SR +Y++ K + F+++ A VE E G+ +K LRSD GGEY F +Y
Subjt: MTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYL
Query: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHVLVQNP
+GI+ + + P TPQ NGV+ER NRT+++ VRSM+ +++ SFWG A++TA Y++N PS ++ E P +W ++ S H +++GC AHV +
Subjt: IENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHVLVQNP
Query: KKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSST--------------------KVVDKTRK
KL+ +S C FIGY E G +DP + K+ S + F E +R S+ V I + + PS+S +V+++ +
Subjt: KKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSST--------------------KVVDKTRK
Query: SSQ-----SHPSQ---QLREPQRSGRVVHQPDRYLG----LI----ETQAMKDV----DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKR
+ HP+Q Q + +RS R + RY LI E +++K+V +++Q +KAM EMES+ N + LV+ P +P+ CKW++K
Subjt: SSQ-----SHPSQ---QLREPQRSGRVVHQPDRYLG----LI----ETQAMKDV----DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKR
Query: KRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYE
K+D K+ +KARLV KG+ Q++G+D++E FSPV + SIR +LS+A D E
Subjt: KRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYE
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 7.2e-26 | 24.69 | Show/hide |
Query: VSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFR-TAETQNKRQK
+ +A+G+L F++ L+ P + +L+S+S + Q F N G ++ + + Y L +++ + I + T NK +
Subjt: VSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISISCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFR-TAETQNKRQK
Query: VSSNAY-LWHLRLGHINLNRIGRLVKSGLLSPLEDNSLP-------PCESCLEGKMTKRSFTGKGLRAK-----GPLELVHSDLCGPMNVKARGGYEYFI
V+ Y L H LGH N I + +K ++ L+++ + C CL GK TK KG R K P + +H+D+ GP++ + YFI
Subjt: VSSNAY-LWHLRLGHINLNRIGRLVKSGLLSPLEDNSLP-------PCESCLEGKMTKRSFTGKGLRAK-----GPLELVHSDLCGPMNVKARGGYEYFI
Query: SFIDDYSRYGHIYLIH--HKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISF
SF D+ +R+ +Y +H + + L F A ++N+ + +++ DRG EY + + GI + + + + +GV+ER NRTLL+ R+++
Subjt: SFIDDYSRYGHIYLIH--HKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISF
Query: SQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKG-SLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYP-KESRGGLFYDPQENKIFVSTNAT
S + + W A+E + I N++ S ++ + G G + +G P V NP H + + +P + S G + Y P K +TN
Subjt: SQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKG-SLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYP-KESRGGLFYDPQENKIFVSTNAT
Query: FLEED
L+++
Subjt: FLEED
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-63 | 22.71 | Show/hide |
Query: NSSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPAS----NANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIM
N+SI+ + S KL NY W ++ + +L L PA+ A R + D Y RW + ++ +L ++S + TA +I
Subjt: NSSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPAS----NANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIM
Query: DSLRGMFGQPEWSLRHEAVKYIYTKRMKEGT-SVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT----TLLNELQ
++LR ++ P + H K+ +GT ++ +++ ++ F+ + G P++ QV +LE+LP+ + P + LT LLN
Subjt: DSLRGMFGQPEWSLRHEAVKYIYTKRMKEGT-SVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT----TLLNELQ
Query: RFQNLTMGKGKQVEANV-----ATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPK---YLAEKKAEKET
+ ++ + AN TT G+ + + N + N + GKC CG GH + C + +L+ +++
Subjt: RFQNLTMGKGKQVEANV-----ATTKRKFIRGSSSKTKAGPSKPNAQIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPK---YLAEKKAEKET
Query: ------QGKYDLLVVETCLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISI
Q + +L + Y + W+LDSGAT+HI F S + + G++ + V G + S G L + R + L N+LYVP + +NLIS+
Subjt: ------QGKYDLLVVETCLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLISI
Query: ------SCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSP
+ + + + SF++ + G+ + +D LY+ + +++ + + + SS WH RLGH + + ++ + LS
Subjt: ------SCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSP
Query: LE-DNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKIL
L + C CL K K F+ + + PLE ++SD+ + + Y Y++ F+D ++RY +Y + KS E F +K +EN I
Subjt: LE-DNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKIL
Query: RSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRH
SD GGE++ L +Y ++GI S P TP+ NG+SER++R +++ +++S + + ++W YA A Y++N +P+ + E+P++ G +
Subjt: RSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRH
Query: FRIWGCPAHVLVQ--NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE-----------DHIRDHQPRSKLVL---------------
R++GC + ++ N KL+ +S+ C F+GY L Q +++++S + F E +++ + S V
Subjt: FRIWGCPAHVLVQ--NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE-----------DHIRDHQPRSKLVL---------------
Query: ----------------------KEISKSAID-------------------------KPSSSTKVVDKTRKSSQSHP--------SQQLREPQRSGR----
++S S +D +P+ + ++ +SQ++P +Q L P +S
Subjt: ----------------------KEISKSAID-------------------------KPSSSTKVVDKTRKSSQSHP--------SQQLREPQRSGR----
Query: -----------------VVHQPDRYLGLIET------------------------------------------QAMKDVDRDQWIKAMDLEMESMYFNSV
++H P ++ QA+KD ++W AM E+ + N
Subjt: -----------------VVHQPDRYLGLIET------------------------------------------QAMKDVDRDQWIKAMDLEMESMYFNSV
Query: WTLV-DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
W LV P+ V +GC+WI+ +K + G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A
Subjt: WTLV-DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-61 | 23.96 | Show/hide |
Query: MNSSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPA---SNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIM
+N++I+ + S KL NY W ++ + +L L P PA ++A Y RW + ++ IL ++S + TA +I
Subjt: MNSSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPA---SNANRTSRDAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIM
Query: DSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVREHV--LDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT----TLLNEL
++LR ++ P + HV L + F+ + G P++ QV +LE+LP + P + +LT L+N
Subjt: DSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVREHV--LDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLT----TLLNEL
Query: QRFQNLTMGKGKQVEANVA------TTKRKFIRGSSSKTKAGPSKPNA-QIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKET
+ L + + ANV T + + RG + ++ N+ Q G +Q K G+C C GH + CP+ + +
Subjt: QRFQNLTMGKGKQVEANVA------TTKRKFIRGSSSKTKAGPSKPNA-QIKKKGKGKTPKQNKGKKAAEKGKCYHCGQNGHWLRNCPKYLAEKKAEKET
Query: QGKYDL--------LVVETCLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLI
Q L V + Y W+LDSGAT+HI F N S+ + G + + + G + + G L R + L VLYVP + +NLI
Subjt: QGKYDL--------LVVETCLVEYENCTWILDSGATNHICFSFQENSSWKKLSEGENTLKVGTGEMVSASAVGDLKLFFRDRYVILKNVLYVPQMKRNLI
Query: SI------SCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLL
S+ + + + + SF++ + G+ + +D LY+ + +++ + + SS WH RLGH +L + ++ + L
Subjt: SI------SCILEQMYRISFEINEAFVFYKGILVCSAILEDNLYKLRPTRANFVLNTEIFRTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLL
Query: SPLE-DNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIK
L + L C C K K F+ + + PLE ++SD+ + + Y Y++ F+D ++RY +Y + KS + F +K+ VEN I
Subjt: SPLE-DNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIK
Query: ILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSL
L SD GGE++ L RDYL ++GI S P TP+ NG+SER++R +++M +++S + + ++W YA A Y++N +P+ + ++P++ G+ +
Subjt: ILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSL
Query: RHFRIWGCPAHVLVQ--NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE--------------------------------------
+++GC + ++ N KLE +SK C F+GY L +++ S + F E
Subjt: RHFRIWGCPAHVLVQ--NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE--------------------------------------
Query: -------DHIRDHQPR-----SKLVLKEIS-----KSAIDKPSSS------------TKVVDKTRKS---------------SQSHPSQQLREPQRSGRV
H+ D PR S L ++S S+I PSSS T +T+ S S + P+Q PQ
Subjt: -------DHIRDHQPR-----SKLVLKEIS-----KSAIDKPSSS------------TKVVDKTRKS---------------SQSHPSQQLREPQRSGRV
Query: VHQPDRYLGLIE-------------------------------------------------------------------TQAMKDVDRDQWIKAMDLEME
H P + E QAMKD D+W +AM E+
Subjt: VHQPDRYLGLIE-------------------------------------------------------------------TQAMKDVDRDQWIKAMDLEME
Query: SMYFNSVWTLV-DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
+ N W LV P V +GC+WI+ +K + G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A
Subjt: SMYFNSVWTLV-DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.4e-21 | 48.35 | Show/hide |
Query: WIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDY
W AMD E+ +M W + P + KPIGCKW+YK K + G ++ +KARLVAKGYTQ+EG+D+ ETFSPV L S++++L+I+ Y++
Subjt: WIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDY
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.6e-04 | 31.71 | Show/hide |
Query: NRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
NRT+++ VRSM+ + +F A TA +I+N PS +++ P E+W + + R +GC A++ + KL+ R+K
Subjt: NRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.6e-15 | 41.86 | Show/hide |
Query: WIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
W +AM E++++ N W LV P + +GCKW++K K G + KARLVAKG+ Q EG+ + ET+SPV +IR +L++A
Subjt: WIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
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