; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G12880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G12880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationChr2:13114586..13115326
RNA-Seq ExpressionCSPI02G12880
SyntenyCSPI02G12880
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457626.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]4.2e-4697.89Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC

XP_011649267.1 auxin-responsive protein SAUR24 [Cucumis sativus]9.9e-48100Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
        MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC

XP_022947579.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]6.0e-4595.74Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEF+RKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQ+
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA

XP_023007093.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]6.7e-4494.68Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEF+RKRFVIPISYLNHFSFQQLLSRAEEEFGF HPEGGLTIPCGEDAF+DLTSRLQ+
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA

XP_038901978.1 auxin-responsive protein SAUR24-like [Benincasa hispida]4.6e-4595.79Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGE QRKRFVIPISYLNH SFQQLL+RAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC

TrEMBL top hitse value%identityAlignment
A0A0A0LJ85 Uncharacterized protein4.8e-48100Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
        MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC

A0A1S3C5H8 auxin-responsive protein SAUR24-like2.0e-4697.89Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC

A0A5A7TUZ6 Auxin-responsive protein SAUR24-like2.0e-4697.89Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC

A0A6J1G776 auxin-responsive protein SAUR24-like2.9e-4595.74Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEF+RKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQ+
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA

A0A6J1L6S0 auxin-responsive protein SAUR24-like3.2e-4494.68Show/hide
Query:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA
        MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEF+RKRFVIPISYLNHFSFQQLLSRAEEEFGF HPEGGLTIPCGEDAF+DLTSRLQ+
Subjt:  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.5e-2567.5Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRL
        AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRL
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR226.5e-2666.67Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.5e-2667.9Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+   SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSR Q
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR199.4e-2565.43Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.5e-2769.14Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT5G18010.1 SAUR-like auxin-responsive protein family6.7e-2665.43Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ

AT5G18020.1 SAUR-like auxin-responsive protein family4.6e-2767.9Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+   SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSR Q
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family4.6e-2766.67Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ

AT5G18060.1 SAUR-like auxin-responsive protein family1.8e-2667.5Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRL
        AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRL
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family3.2e-2869.14Show/hide
Query:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ
        AK +L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCCAAGCATTTGCTGAGGAGAAGCTCCGGTAATCCATCGGCGGTTCCGAAAGGTCATGTAGCAGTGTACGTCGG
AGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATTTTTCGTTTCAACAATTGTTGAGTCGAGCGGAGGAAGAGTTTGGATTTGATCATCCAGAAG
GTGGTTTGACGATTCCTTGTGGTGAAGATGCATTTATCGACCTTACTTCAAGATTGCAAGCTTGTTAA
mRNA sequenceShow/hide mRNA sequence
CTACCATTCTACAACCAATCCCTTCCTATAAATTCAAAACCCTAATCTCCCCAATTCCCAAATCACATTTTCCTCTTCAATCAGTTTCATCCATTTCTCCATTTTTTTTT
CTCCTCAATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCCAAGCATTTGCTGAGGAGAAGCTCCGGTAATCCATCGGCGGTTCCGAAAGGTCATGTAGCAGTGT
ACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATTTTTCGTTTCAACAATTGTTGAGTCGAGCGGAGGAAGAGTTTGGATTTGATCAT
CCAGAAGGTGGTTTGACGATTCCTTGTGGTGAAGATGCATTTATCGACCTTACTTCAAGATTGCAAGCTTGTTAAATCCATGAAGAACTAGGAAGGAAGGATCTCGATTT
TTGCCTTTGGCTTCTTCTTCTTCTTCTTTCTTTCTTTTTCCTTTTTCCTTTGGGGAATGGAGATGTTCATGTGTTGTTGATGATTTTTGCATTCTGACTGATGTTAGAAT
GTTGATGGAACCCAATTACAATACAATGCTTTTGGGTGTTGTCAATTGTAATGAGTGGTGTTGGAATGGATTGGTGAATTTTTTTTCACCAGAAATTGTAATGCAAATAC
AACTTTTTTCTTTTTCTGTATCATTTTCTCCTGTTTATGCTTTGATGAATTTGGATTATACTTCAAAAAACTTAACTGTTG
Protein sequenceShow/hide protein sequence
MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC