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CSPI02G12930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G12930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationChr2:13131032..13131630
RNA-Seq ExpressionCSPI02G12930
SyntenyCSPI02G12930
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61874.1 hypothetical protein Csa_006725 [Cucumis sativus]2.0e-48100Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

XP_016902158.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]4.5e-4898.97Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITS+LQAS
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

XP_022146168.1 auxin-responsive protein SAUR24-like [Momordica charantia]5.8e-4389.69Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIRLLSLVPHAKQ+LKIQSG TK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEEEFGFHHPQGGLTIPCKEDAF  +TS+LQ S
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]5.8e-4388.66Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEE+FGFHHPQGGLTIPCKEDAF ++TS+LQ S
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]9.8e-4388.66Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEE+FGFHHPQGGLTIPCKEDAF ++TS+LQ S
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

TrEMBL top hitse value%identityAlignment
A0A0A0LLF1 Uncharacterized protein9.9e-49100Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

A0A1S4E1Q7 auxin-responsive protein SAUR24-like2.2e-4898.97Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITS+LQAS
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

A0A5A7TQL7 Auxin-responsive protein SAUR24-like2.2e-4898.97Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITS+LQAS
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

A0A6J1CXV3 auxin-responsive protein SAUR24-like2.8e-4389.69Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIRLLSLVPHAKQ+LKIQSG TK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEEEFGFHHPQGGLTIPCKEDAF  +TS+LQ S
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

A0A6J1JHE3 auxin-responsive protein SAUR24-like2.8e-4388.66Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+QLL HAEE+FGFHHPQGGLTIPCKEDAF ++TS+LQ S
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.3e-2154.17Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQA
        MG RL    P  ++ L  ++  +   LD PKG++AVYVGE   KRFV+P+S+LN P F+ LL  AEEEFG+ HP GGLTIPC ED F  ITS L A
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQA

Q9FJF7 Auxin-responsive protein SAUR227.6e-2260.76Show/hide
Query:  KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ
        KI S  T      PKG +AVYVGE Q+KR++VP+SYLN PSF+ LL  +E+EFGF HP GGLTIPC ED F  +TS+LQ
Subjt:  KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ

Q9FJG0 Auxin-responsive protein SAUR204.5e-2262.03Show/hide
Query:  KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ
        KI S  T      PKG +AVYVGE Q+KR++VPISYLN PSF+ LL  +EEEFGF HP GGLTIPC ED F  +TS+ Q
Subjt:  KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ

Q9FJG1 Auxin-responsive protein SAUR191.7e-2160.76Show/hide
Query:  KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ
        KI S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSF+ LL  +EEEFGF HP GGLTIPC ED F  +TS+LQ
Subjt:  KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ

Q9FK62 Auxin-responsive protein SAUR243.4e-2259.52Show/hide
Query:  AKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSF+ LL  +EEEFGF HP GGLTIPC ED F  +TS+LQ
Subjt:  AKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.4e-2554.08Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
        M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP F++LL  AEEEFGF HP GGLTIPC E  F ++ S+L  S
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS

AT4G34770.1 SAUR-like auxin-responsive protein family2.9e-2458.88Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGL---------TKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEI
        MGI+L+ L   AKQ  K+Q  L         T    +VPKGHVAVYVGE   RKRFV+PISYLNHP F+ LL  AEEEFGF HP GGLTIPC ED FT +
Subjt:  MGIRLLSLVPHAKQILKIQSGL---------TKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEI

Query:  TSKLQAS
         S L  S
Subjt:  TSKLQAS

AT4G34790.1 SAUR-like auxin-responsive protein family2.2e-2454.21Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFT
        MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L  AEEE GFHH  GGLTIPC+E++F 
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFT

Query:  EITSKLQ
         + +  Q
Subjt:  EITSKLQ

AT4G34810.1 SAUR-like auxin-responsive protein family3.1e-2656.19Show/hide
Query:  MGIRLLSLVPHAKQILKIQSGLTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTE-I
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSFK+ L  AEEEFGF+HP GGLTIPC+E+ F + I
Subjt:  MGIRLLSLVPHAKQILKIQSGLTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTE-I

Query:  TSKLQ
         S+LQ
Subjt:  TSKLQ

AT4G38840.1 SAUR-like auxin-responsive protein family7.5e-2554.64Show/hide
Query:  MGIRLLSLVPHAKQILK----IQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSK
        M IR+  ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSF+ LL  AEEEFGF HP GGLTIPC E+ F ++ S+
Subjt:  MGIRLLSLVPHAKQILK----IQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCCAAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTA
TGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCAATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATC
CTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCTCTTCTAGTTGGTTTGGAACCAATCCAATCGAAATCTAAGATATTTTCATAGTCTTTCATCTTAAACAAATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCC
AAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCC
AATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATG
CCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGAAGGATGAAGAAAAAATGGCAATATTTCATTTTTTGACCATTTGTTTTTCAAAATTTTCTCTATTCACTTGCC
TTTTGACTTGCAAGAGAATATACTCCATTGTTAGCCATAGACTATAAATGAGTAGCATTGTAAAGTACTGTTTACCAACAAAAGTAGATGTATGCACATACAGCAACAAT
TCAGAATCAATTCCCATGTAGCTTATTCTTGTCTATACTCTATAGATCC
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS