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CSPI02G12950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G12950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationChr2:13135991..13136613
RNA-Seq ExpressionCSPI02G12950
SyntenyCSPI02G12950
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457632.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]5.6e-4694.85Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQLL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_016902164.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]3.1e-4491.75Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG  LLSLVPHAK+ILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVP+SYLNDPSFQQLLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]5.2e-4490.72Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVPISYLN PSFQQLLSHAEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.2e-4389.69Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRF+VPISYLN PSFQQLLSHAEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_031736841.1 auxin-responsive protein SAUR24-like [Cucumis sativus]2.0e-4898.97Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

TrEMBL top hitse value%identityAlignment
A0A0A0LPI0 Uncharacterized protein9.9e-4998.97Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A1S3C5I3 auxin-responsive protein SAUR24-like2.7e-4694.85Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQLL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A1S4E1Q9 auxin-responsive protein SAUR24-like1.5e-4491.75Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG  LLSLVPHAK+ILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVP+SYLNDPSFQQLLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A5A7TRJ5 Auxin-responsive protein SAUR24-like2.7e-4694.85Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQLL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A5A7TU68 Auxin-responsive protein SAUR24-like1.5e-4491.75Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG  LLSLVPHAK+ILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVP+SYLNDPSFQQLLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

SwissProt top hitse value%identityAlignment
P33083 Auxin-induced protein 6B2.6e-2255.32Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL
        MGFRL    P  ++     +  +   ++V KG++AVYVGE + +RFV+P+SYLN PSFQ LLS AEEEFG+HHP+GGLTIPC ED F  +TS L
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL

Q9FJF7 Auxin-responsive protein SAUR221.2e-2269.7Show/hide
Query:  PKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        PKG +AVYVGE ++KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  PKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.0e-2269.7Show/hide
Query:  PKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        PKG +AVYVGE ++KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  PKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR205.3e-2363.29Show/hide
Query:  KMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE ++KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  KMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.1e-2361.9Show/hide
Query:  AKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        AK+IL   +G        PKG +AVYVGE ++KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  AKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.6e-2554.08Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGE-IRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        M  R+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE ++++RFVVP++YL+ P FQ+LL  AEEEFGF HP GGLTIPC E  F+DL SRL  +
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGE-IRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

AT4G34810.1 SAUR-like auxin-responsive protein family5.2e-2657.14Show/hide
Query:  MGFRLLSLVPHAKQILKMQSGFTKNQL------NVPKGHVAVYVG---EIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDL-
        MG    ++    KQILK+ S   +N+       +VPKGHVAVYVG   E+ +KRFVVPIS+LN PSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGFRLLSLVPHAKQILKMQSGFTKNQL------NVPKGHVAVYVG---EIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family4.0e-2656.7Show/hide
Query:  MGFRLLSLVPHAKQILK----MQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSR
        M  R+  ++  +KQIL+    + S  + + L+VPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Subjt:  MGFRLLSLVPHAKQILK----MQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family3.7e-2463.29Show/hide
Query:  KMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE ++KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  KMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family7.5e-2561.9Show/hide
Query:  AKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        AK+IL   +G        PKG +AVYVGE ++KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  AKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTA
TGTGGGAGAGATTCGAAGGAAGCGGTTCGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATC
CTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
CATACTATGAGGCTCAAACAACCAAATTCAATTGTTAACTTCCTCTGCTACTTGGTTCTGTACCAATCTGATCAAAACTTAAAATATTTCTCAACCTTTCATCTTAACAC
AAATGGGGTTTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTT
TATGTGGGAGAGATTCGAAGGAAGCGGTTCGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCA
TCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGAAGGATGAAGAGTAAAGAGCAATCTGTCATTTATG
ACAGTTTTTGTCTGTTCTTTTTCTCCATTCACTTGCTTTTTGACTTGCAGGAGATTGTATAAATTAGAGTGCCTTCTTACTTGTATATGAGCATCATTGTAAAGGAAAAT
TACTTACAGAAATTGTGATAATTAATACAGAAACAATTCAGCATCAACTTCTATGTCACTTCTTTTGTTCACC
Protein sequenceShow/hide protein sequence
MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA