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CSPI02G12990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G12990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationChr2:13147720..13148290
RNA-Seq ExpressionCSPI02G12990
SyntenyCSPI02G12990
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022944371.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]1.4e-4491.75Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIR LSLVPHAKQILKMQPGFTK+QL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQLL+HAEE+FGFHHPQGGLTIPCKEDAFI+LTSRL VS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.0e-4492.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ+LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]1.4e-4492.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]1.4e-4491.75Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ+LL+HAEEEFGFHHPQGGLTIPCKEDAF++LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

XP_038900563.1 auxin-responsive protein SAUR21-like [Benincasa hispida]4.7e-4592.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQILKMQP FTKSQL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQLL+HAEEEFGFHHPQGG+TIPCKEDAFI+LTSRLQ S
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CXV3 auxin-responsive protein SAUR24-like1.1e-4492.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQ+LK+Q GFTKSQL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQLL+HAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

A0A6J1FU85 auxin-responsive protein SAUR23-like6.6e-4591.75Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIR LSLVPHAKQILKMQPGFTK+QL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQLL+HAEE+FGFHHPQGGLTIPCKEDAFI+LTSRL VS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

A0A6J1G6T7 auxin-responsive protein SAUR24-like5.1e-4592.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ+LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

A0A6J1G6U1 auxin-responsive protein SAUR23-like1.1e-4491.75Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQ+LL+HAEEEFGFHHPQGGLTIPCKEDAF++LTSRL VS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

A0A6J1KZJ6 auxin-responsive protein SAUR24-like6.6e-4592.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR224.0e-2361.9Show/hide
Query:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ
        AK+IL      T +    PKG +AVYVGE Q+KR++VP+ YLN PSFQ LL+ +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.2e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ
        PKG +AVYVGE Q+KR++VP+ YL+ PSFQ LL+ +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.4e-2363.1Show/hide
Query:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ
        AK+IL      T +    PKG +AVYVGE Q+KR++VPI YLN PSFQ LL+ +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR199.0e-2361.9Show/hide
Query:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ
        AK+IL      T +    PKG +AVYVGE Q+KR++VP+ YL+ PSFQ LL+ +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.8e-2463.1Show/hide
Query:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ
        AK+IL    G   +    PKG +AVYVGE Q+KR++VP+ YLN PSFQ LL+ +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.2e-2656.12Show/hide
Query:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGE-IQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS
        M IR+  ++  +KQ+LK     + + + +PKGH+AVYVGE +Q++RFVVP+ YL+HP FQ+LL  AEEEFGF HP GGLTIPC E  FI+L SRL  S
Subjt:  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGE-IQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS

AT4G34810.1 SAUR-like auxin-responsive protein family5.8e-2554.29Show/hide
Query:  MGIRLLSLVPHAKQILKMQP------GFTKSQLNVPKGHVAVYVG---EIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINL-
        MG+   ++    KQILK+          + S  +VPKGHVAVYVG   E+++KRFVVPI +LNHPSF++ L+ AEEEFGF+HP GGLTIPC+E+ F++L 
Subjt:  MGIRLLSLVPHAKQILKMQP------GFTKSQLNVPKGHVAVYVG---EIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family2.6e-2556.7Show/hide
Query:  MGIRLLSLVPHAKQILK----MQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSR
        M IR+  ++  +KQIL+    +    + S L+VPKG++AVYVGE   KRFVVP+ YL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FI+L SR
Subjt:  MGIRLLSLVPHAKQILK----MQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family1.7e-2463.1Show/hide
Query:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ
        AK+IL      T +    PKG +AVYVGE Q+KR++VPI YLN PSFQ LL+ +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family3.4e-2563.1Show/hide
Query:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ
        AK+IL    G   +    PKG +AVYVGE Q+KR++VP+ YLN PSFQ LL+ +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTA
CGTAGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATC
CTCAAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ACCGAATTCAGCTGAAAAATATTCAAACAAAACTTCTTCCTCTAGTTGGTTTCGTCCCACCCAGATAAAAACTTCAGGCATTACAAACGGTCCTTTATCTCAAACAAATG
GGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTACGT
AGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATCCTC
AAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGAAGTACAAAGAGTAAAGTGAAACCTTTCATTTCTAACAAT
TTTTTCCTGGGTTTTTCTGATTCATTCAGAATTTTGTAGAATGTAACACCTTCCTGCCTAAAAATGTGAGGCATTATAAAGGTGTAGTGTATTTACTAACAATCAAAAGA
ATAGACTCATCACTTTCAGCA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS