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CSPI02G13000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G13000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationChr2:13152317..13154130
RNA-Seq ExpressionCSPI02G13000
SyntenyCSPI02G13000
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605019.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4287.63Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

KGN61880.1 hypothetical protein Csa_006123 [Cucumis sativus]9.0e-48100Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.9e-4287.63Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]6.6e-4388.66Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQLLNH+EE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]2.5e-4286.6Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LL+H+EEEFGFHHPQG LTIPCKEDAF+DLTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

TrEMBL top hitse value%identityAlignment
A0A0A0LIZ9 Uncharacterized protein4.3e-48100Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1CXV3 auxin-responsive protein SAUR24-like1.2e-4288.66Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVP+ KQ+LKIQSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQLL+H+EEEFGFHHPQG LTIPCKEDAFI LTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1FVI4 auxin-responsive protein SAUR24-like1.2e-4287.63Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQLL+H+EE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1G6T7 auxin-responsive protein SAUR24-like9.4e-4387.63Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1JHE3 auxin-responsive protein SAUR24-like1.2e-4287.63Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQLL+H+EE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR225.1e-2269.7Show/hide
Query:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        PKG +A+YVGE Q+KR++VP+SYLN PSFQ LL+ SE+EFGF HP G LTIPC ED FI++TSRLQ
Subjt:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR218.8e-2269.7Show/hide
Query:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        PKG +A+YVGE Q+KR++VP+SYL+ PSFQ LL+ SEEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR203.9e-2271.21Show/hide
Query:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        PKG +A+YVGE Q+KR++VPISYLN PSFQ LL+ SEEEFGF HP G LTIPC ED FI++TSR Q
Subjt:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.1e-2169.7Show/hide
Query:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        PKG +A+YVGE Q+KR++VP+SYL+ PSFQ LL+ SEEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.8e-2271.21Show/hide
Query:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        PKG +A+YVGE Q+KR++VP+SYLN PSFQ LL+ SEEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family8.7e-2555.1Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGE-IQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        M IR+  ++   KQ+LK  S      + +PKGH+A+YVGE +Q++RFVVP++YL+HP FQ+LL  +EEEFGF HP G LTIPC E  FIDL SRL  S
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGE-IQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

AT4G34810.1 SAUR-like auxin-responsive protein family2.5e-2453.33Show/hide
Query:  MGIRLLSLVPYGKQILKIQSGFIKGQLD------VPKGHVAIYVG---EIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   + +        VPKGHVA+YVG   E+++KRFVVPIS+LNHPSF++ L+ +EEEFGF+HP G LTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPYGKQILKIQSGFIKGQLD------VPKGHVAIYVG---EIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family3.9e-2556.7Show/hide
Query:  MGIRLLSLVPYGKQILK----IQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSR
        M IR+  ++   KQIL+    + S      LDVPKG++A+YVGE   KRFVVP+SYL+ PSFQ LL  +EEEFGF HP G LTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPYGKQILK----IQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family2.8e-2371.21Show/hide
Query:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        PKG +A+YVGE Q+KR++VPISYLN PSFQ LL+ SEEEFGF HP G LTIPC ED FI++TSR Q
Subjt:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2371.21Show/hide
Query:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        PKG +A+YVGE Q+KR++VP+SYLN PSFQ LL+ SEEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  PKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCAATAAACAAGATAAGTAACCATGGAGCTGAAAAGATGCGTCTACCTGGGGATCGGGTGATGTCAAAGAAAAAGCTGTGGGGTTTTTTGCGACTGTGCCATGA
CACCATGTTGACCAAAGAGTTCTTTGTATGGATTGCAGCAATCATTCAAAGTCCTGGTCTGCAATTTGGAAGACGTGAGCCTTTGGAGTCCTTTGACCAAGACATCGAGT
CCAACAATCCCTATACCAATCAGATCGAAGCTTTAGACCACTGGGAGAGCCTTTCTTCTCAAGCAATGGGGATTCGATTGCTATCCTTGGTTCCGTATGGCAAGCAGATA
TTAAAGATTCAGTCAGGATTTATCAAAGGTCAATTGGACGTGCCAAAAGGCCATGTAGCTATTTATGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATATCTTA
CCTAAACCATCCATCATTCCAACAACTTCTTAACCATTCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGCTTTAACAATTCCTTGTAAAGAGGATGCCTTCATTG
ATCTCACTTCTAGATTGCAAATATCTTGA
mRNA sequenceShow/hide mRNA sequence
CCGTAGGTTCAAAAACTTCACAAGATATGTTGTCTGGTGTAAAGCGTGATATATTATATCTGACAGAATTTGGATGTTCGGCTTATGCTCGCAATAAACAAGATAAGTAA
CCATGGAGCTGAAAAGATGCGTCTACCTGGGGATCGGGTGATGTCAAAGAAAAAGCTGTGGGGTTTTTTGCGACTGTGCCATGACACCATGTTGACCAAAGAGTTCTTTG
TATGGATTGCAGCAATCATTCAAAGTCCTGGTCTGCAATTTGGAAGACGTGAGCCTTTGGAGTCCTTTGACCAAGACATCGAGTCCAACAATCCCTATACCAATCAGATC
GAAGCTTTAGACCACTGGGAGAGCCTTTCTTCTCAAGCAATGGGGATTCGATTGCTATCCTTGGTTCCGTATGGCAAGCAGATATTAAAGATTCAGTCAGGATTTATCAA
AGGTCAATTGGACGTGCCAAAAGGCCATGTAGCTATTTATGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATATCTTACCTAAACCATCCATCATTCCAACAAC
TTCTTAACCATTCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGCTTTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAAATATCT
TGA
Protein sequenceShow/hide protein sequence
MLAINKISNHGAEKMRLPGDRVMSKKKLWGFLRLCHDTMLTKEFFVWIAAIIQSPGLQFGRREPLESFDQDIESNNPYTNQIEALDHWESLSSQAMGIRLLSLVPYGKQI
LKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS