; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G13110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G13110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein
Genome locationChr2:13218738..13219597
RNA-Seq ExpressionCSPI02G13110
SyntenyCSPI02G13110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045689.1 hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa]4.5e-4895.83Show/hide
Query:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
        MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCL+SMDSSPRYYACPC+RGWKM+CRCG GSAW
Subjt:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW

KAG6571042.1 hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4489.58Show/hide
Query:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
        MTYCYGCKPRPSGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCL+++DSS RYYACPC+RGWKM CRCGRG AW
Subjt:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW

KAG6605007.1 hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3582.29Show/hide
Query:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
        MTYCYG KP PSGPLPGPIL+LL VVFILI LSSLF SEPIDFSEFQINWPLLAVPIIILVLVR L+S+DSS R+  C CDRGWKMHCRC  G AW
Subjt:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW

KGN61893.1 hypothetical protein Csa_006600 [Cucumis sativus]2.2e-50100Show/hide
Query:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
        MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
Subjt:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW

PKI78722.1 hypothetical protein CRG98_000947 [Punica granatum]2.0e-1147.83Show/hide
Query:  YCYGCK-PRPS-GPLPGPILLLLAVVFILIALSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYA-CPCDRGWKMHCRC
        YCY CK P PS GP+P  +LL L +  I IALS L   + + +  E  INW LLAVPI+IL +V  L+S+D   ++Y   PC R WK  C C
Subjt:  YCYGCK-PRPS-GPLPGPILLLLAVVFILIALSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYA-CPCDRGWKMHCRC

TrEMBL top hitse value%identityAlignment
A0A0A0LJB6 Uncharacterized protein1.0e-50100Show/hide
Query:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
        MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
Subjt:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW

A0A1R3JDI7 Uncharacterized protein1.4e-0741.86Show/hide
Query:  YCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDR--GWK
        YC  C  RPS P+P  +LL LA+  +L+ALSSL   E  ++ +E  + W +L   + +LV+VRCL+S DS  + + C C R   WK
Subjt:  YCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDR--GWK

A0A2I0LDH6 Uncharacterized protein9.6e-1247.83Show/hide
Query:  YCYGCK-PRPS-GPLPGPILLLLAVVFILIALSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYA-CPCDRGWKMHCRC
        YCY CK P PS GP+P  +LL L +  I IALS L   + + +  E  INW LLAVPI+IL +V  L+S+D   ++Y   PC R WK  C C
Subjt:  YCYGCK-PRPS-GPLPGPILLLLAVVFILIALSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYA-CPCDRGWKMHCRC

A0A5D3BJW1 Uncharacterized protein2.2e-4895.83Show/hide
Query:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW
        MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCL+SMDSSPRYYACPC+RGWKM+CRCG GSAW
Subjt:  MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW

A0A6J1AFV4 uncharacterized protein LOC1104175865.4e-0744.19Show/hide
Query:  YCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDR--GWK
        YC  C+ RPS PLP  +LL LA+  +L+ALSSL   E  ++ +E  + W +L   + +LVLVR L+ MDS  R + C C R   WK
Subjt:  YCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDR--GWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein1.3e-0544.07Show/hide
Query:  PLPGPILLLLAVVFILIALSSLFP-SEPIDFSEFQINWPLLAVPIIILVLVRCLASMDS
        PLP P+LL+LAV  + +  S  F   E  + +E QIN+ LL +P+ ++VLVR L+SM++
Subjt:  PLPGPILLLLAVVFILIALSSLFP-SEPIDFSEFQINWPLLAVPIIILVLVRCLASMDS

AT2G21185.1 unknown protein1.4e-0737.5Show/hide
Query:  CYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSE-PIDFSEFQINWPLL-AVPIIILVLVRCLASMDSSPR-YYACPCDRGWKMHC
        C  C+   S   P P+++++ V  +L+ALSS+   E  +   E  ++W LL AVP+ +L  VRCL+ +++S R  Y CPC R W+  C
Subjt:  CYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSE-PIDFSEFQINWPLL-AVPIIILVLVRCLASMDSSPR-YYACPCDRGWKMHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACTGCTATGGATGTAAACCTCGCCCTTCCGGTCCTCTTCCCGGTCCTATCCTTCTGCTTCTCGCCGTGGTTTTCATCTTGATCGCCTTGTCCTCCCTTTTCCC
CTCCGAACCAATCGACTTCTCCGAATTTCAAATCAATTGGCCTCTTCTCGCTGTTCCGATTATCATTCTTGTTCTTGTTCGTTGTTTAGCATCCATGGATTCTTCACCCA
GGTACTATGCTTGCCCTTGCGATCGTGGCTGGAAGATGCACTGTCGGTGCGGCCGTGGCAGCGCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
CTCTTGCAATTAAAATACTTTTGAAAAGAAACGAAAGAAAACTACGGACTCAAAACTTTCGCACCGCCACCACTCTATGCTATAAATACTCACTTCTCTCTCTCTCTCTC
TCGCTCGCTCGCTCGCTCGTTTCCACTCCCTGTTATCTTCCATTTTCAAACCTTTCAACCTACTCTCTCAAATTCCCCATTGTTGACAGTTCAAAGGTACTGAAAATGAC
TTACTGCTATGGATGTAAACCTCGCCCTTCCGGTCCTCTTCCCGGTCCTATCCTTCTGCTTCTCGCCGTGGTTTTCATCTTGATCGCCTTGTCCTCCCTTTTCCCCTCCG
AACCAATCGACTTCTCCGAATTTCAAATCAATTGGCCTCTTCTCGCTGTTCCGATTATCATTCTTGTTCTTGTTCGTTGTTTAGCATCCATGGATTCTTCACCCAGGTAC
TATGCTTGCCCTTGCGATCGTGGCTGGAAGATGCACTGTCGGTGCGGCCGTGGCAGCGCGTGGTAACTGCTAAACCTAATTTAATTGAAAATTCGTTTCATCATATATAC
TTAATCGTTGTTTTAGTGTAAATTATAAAGAGGATGAGATTGTGATAATCGTGTTAAAAGGATTATGATCCATTTATGTGACGGTAAGGATTGAATAAGGTGTATATGAA
ATTGAATTATGGCGATGTGTGTTTGTTTGTTTGTTCTTAGATTACATGTGAAGCGTAATTTTTTGTGATTTGGGGATAATCATTCAACTTTTAGACATTGAAGTTTGTTG
GATTTGAACTAAGTCAAGTAACAAGGCTATAATCCGTCTTGGCGAACCTGCGAATGAAATCAAGAAAATCATTCAACCACACCTATAAAC
Protein sequenceShow/hide protein sequence
MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRCLASMDSSPRYYACPCDRGWKMHCRCGRGSAW