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CSPI02G13420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G13420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr2:13446917..13447312
RNA-Seq ExpressionCSPI02G13420
SyntenyCSPI02G13420
Gene Ontology termsNA
InterPro domainsIPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651895.1 hypothetical protein Csa_006112 [Cucumis sativus]2.9e-6697.71Show/hide
Query:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ
        MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPE SGKAKITMFDVVSEKSFKATMERKS SNQFLITWKKD VKNINYKSGDEILLYWEPQ
Subjt:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ

Query:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
        IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
Subjt:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
KAE8651896.1 hypothetical protein Csa_006487 [Cucumis sativus]5.2e-6393.13Show/hide
Query:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ
        MEQ KKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPE +GKAKITMFDVVSEKSFKATMERKS SNQFLITWKKD VKNINYK+GDEILLYWEPQ
Subjt:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ

Query:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
        IKSLCFEIV+CSALRTYPQMSGQY SYNY S
Subjt:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
TrEMBL top hitse value%identityAlignment
A0A0A0LD04 Uncharacterized protein1.4e-6697.71Show/hide
Query:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ
        MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPE SGKAKITMFDVVSEKSFKATMERKS SNQFLITWKKD VKNINYKSGDEILLYWEPQ
Subjt:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ

Query:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
        IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
Subjt:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
A0A0A0LJ50 Uncharacterized protein1.1e-6393.89Show/hide
Query:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ
        MEQ KKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPE SGKAKITMFDVVSEKSFKATMERKS SNQFLITWKKD VKNINYK+GDEILLYWEPQ
Subjt:  MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQ

Query:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
        IKSLCFEIV+CSALRTYPQMSGQY SYNY S
Subjt:  IKSLCFEIVRCSALRTYPQMSGQYHSYNYRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGTCGAAGAAGCCATGGTCGATTACAGAGACACTAGATGGAAGCAAAGAATTGGGTCTAAAGTTGGATGCTGCAGAGATGTTATTTGAATCCTCATTTCTTCT
TAACTATTTTCCAGAACATAGTGGGAAAGCAAAAATCACCATGTTTGACGTGGTTTCAGAGAAAAGTTTTAAAGCAACAATGGAAAGGAAAAGCACTTCAAACCAATTTT
TGATTACGTGGAAAAAAGACTTGGTAAAAAACATAAACTATAAGAGTGGAGATGAAATTTTATTGTATTGGGAACCTCAAATCAAAAGTCTATGTTTTGAGATTGTAAGG
TGTTCCGCTCTTAGAACTTATCCACAAATGTCCGGTCAGTACCATTCGTATAATTATCGTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGTCGAAGAAGCCATGGTCGATTACAGAGACACTAGATGGAAGCAAAGAATTGGGTCTAAAGTTGGATGCTGCAGAGATGTTATTTGAATCCTCATTTCTTCT
TAACTATTTTCCAGAACATAGTGGGAAAGCAAAAATCACCATGTTTGACGTGGTTTCAGAGAAAAGTTTTAAAGCAACAATGGAAAGGAAAAGCACTTCAAACCAATTTT
TGATTACGTGGAAAAAAGACTTGGTAAAAAACATAAACTATAAGAGTGGAGATGAAATTTTATTGTATTGGGAACCTCAAATCAAAAGTCTATGTTTTGAGATTGTAAGG
TGTTCCGCTCTTAGAACTTATCCACAAATGTCCGGTCAGTACCATTCGTATAATTATCGTTCCTAG
Protein sequenceShow/hide protein sequence
MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEHSGKAKITMFDVVSEKSFKATMERKSTSNQFLITWKKDLVKNINYKSGDEILLYWEPQIKSLCFEIVR
CSALRTYPQMSGQYHSYNYRS