; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G13480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G13480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr2:13484303..13485205
RNA-Seq ExpressionCSPI02G13480
SyntenyCSPI02G13480
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045720.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]4.1e-10087.2Show/hide
Query:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL
        KLIQLGITAS+DLGQIGGSWEFNFSDFDF+ DAHSP AIPFLE NGLD KK+KKDGIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLIT+L
Subjt:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL

Query:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKM
        P+SMEEFA +VVNEVGIVRDLKHMA+FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAHFEMV+RF M S+VCNGFLYGFS++LESMKMKM
Subjt:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKM

Query:  KMKICHHNILR
        K+KI  HNILR
Subjt:  KMKICHHNILR

KAA0045730.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.5e-13484.97Show/hide
Query:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS
        MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFS
Subjt:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS

Query:  DFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA
        DFDF+ D+HSP AIPFLE NGLD KK+KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFAT+VVNEVGIVRDLKHMA
Subjt:  DFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA

Query:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAHFEMV+RFGM  +VCNGFLYGFSE+LES    MKM I HHNILR
Subjt:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.6e-8860.31Show/hide
Query:  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPY
        + PLIR+VWA N D EI R D CL  +++++IDTEFPG I ++P G+ID+ELY DF FNVNQTK+IQLG+T SD++G IGG+WEFNFSDFD E DAH+P 
Subjt:  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPY

Query:  AIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRL
        +I FL+ NGLD  K+KKDGI +  F  +FL  +RK  I+RWVTFHGLYDIGYL+ AMG++  LP+++ EF  +V   VG VRDLKHMA+FCEGL+  G L
Subjt:  AIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRL

Query:  GLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLE
        GLE+LG+LL+ KRFG+KH+AGSDSL+TA  H +M++R+  N+++C+GFLYG S+  E
Subjt:  GLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLE

XP_031736916.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]3.1e-17299.33Show/hide
Query:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
        MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
Subjt:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD

Query:  FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
        FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
Subjt:  FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK

Query:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYVST
        FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAH EMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFY+ST
Subjt:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYVST

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]1.4e-10865.46Show/hide
Query:  GRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFD
        G N+ R    K LI +VWASNFD+EI++ +ECL FHTI++IDTEFPGFI  SP GSID+ LY+DF FNVNQTKLIQLG+TA DD G+IGGSWEFNFSDFD
Subjt:  GRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFD

Query:  FEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFC
         E DA SP +  FLE NGLD  K+KK GIPI  FT KF+ I+RK ++FRWVTFHGLYDIGYLIKAMG+  VLP++MEEFATVVV  +GIVRDLKHMA+FC
Subjt:  FEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFC

Query:  EGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFS---------LYIPCY
        EGL+D G+LGLERLGKLL+ KR+G+KHNAGSDSLLTASAHFEM++RF M++++C+G+LYGFS  L+SM + M M   H  I+ F           Y+P Y
Subjt:  EGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFS---------LYIPCY

Query:  FVFY
          +Y
Subjt:  FVFY

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease1.5e-17299.33Show/hide
Query:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
        MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
Subjt:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD

Query:  FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
        FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
Subjt:  FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK

Query:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYVST
        FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAH EMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFY+ST
Subjt:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYVST

A0A5A7TRF3 Putative CCR4-associated factor 1-like protein 82.0e-10087.2Show/hide
Query:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL
        KLIQLGITAS+DLGQIGGSWEFNFSDFDF+ DAHSP AIPFLE NGLD KK+KKDGIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLIT+L
Subjt:  KLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVL

Query:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKM
        P+SMEEFA +VVNEVGIVRDLKHMA+FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAHFEMV+RF M S+VCNGFLYGFS++LESMKMKM
Subjt:  PKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKM

Query:  KMKICHHNILR
        K+KI  HNILR
Subjt:  KMKICHHNILR

A0A5A7TRG1 Poly(A)-specific ribonuclease7.3e-13584.97Show/hide
Query:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS
        MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFS
Subjt:  MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFS

Query:  DFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA
        DFDF+ D+HSP AIPFLE NGLD KK+KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFAT+VVNEVGIVRDLKHMA
Subjt:  DFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMA

Query:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAHFEMV+RFGM  +VCNGFLYGFSE+LES    MKM I HHNILR
Subjt:  KFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR

A0A6J1G7L2 Poly(A)-specific ribonuclease1.9e-8759.63Show/hide
Query:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD
        MG RN+ R  R  P I++VWASNFD EI R + CL+ + IL+IDTEFPG I  +P GSID+ +Y+D  FNVNQTKLIQLG+TASD+ GQ+ GSWEFNFSD
Subjt:  MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSD

Query:  FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK
        FD + D  +P +I FLE NGLD  K+KK GIP++ FT  F  I+R+  + +WVTFHGLYDIGYL+KAMG+   LP+SMEEFA +V   VG+VRDLK +A+
Subjt:  FDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAK

Query:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESM
        +CEGL + GR+GLERLG+LL  KRFGMKH+AGSDSLLTA  H +M   F + S+  +G LYG    L+ M
Subjt:  FCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESM

A0A6J1G7T4 Poly(A)-specific ribonuclease3.3e-8759.46Show/hide
Query:  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPY
        + PLIR+VWA N D EI R D CL  ++I++IDTEFPG I ++P G+ D+ELY DF FNVNQTK+IQLG+T SD+ G IGG+WEFNFSDFD E DAH+P 
Subjt:  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPY

Query:  AIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRL
        +I FL+ NGLD  K+KKDGI +  F  +FL  L K  I+RWVTFHGLYDIGYL+ AMG++  LP+++ EF  +V   VG VRDLKHMA+FCEGL+  G L
Subjt:  AIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRL

Query:  GLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESM
        GLE+LG+LL+ KRFG+KH+AGSDSL+TA  H +M++R+  ++++C+GFLYG S+  E +
Subjt:  GLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESM

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.7e-3839.83Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LIQLG+T       I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDLKKMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
        +NGLDL K++++GI I  F  +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+K MA  C GL    R GL+R
Subjt:  HNGLDLKKMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTASAHFEMV
        +  +L ++R G  H+AGSDS LTA    +++
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTASAHFEMV

Q9C6M9 Putative CCR4-associated factor 1 homolog 46.1e-3840.62Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+L K+ ++GI I  F + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    R GL+R
Subjt:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTA
        +  +L +KR G  H+AGSDS LTA
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTA

Q9LXM4 Putative CCR4-associated factor 1 homolog 88.2e-4344.29Show/hide
Query:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGI
        ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IGG+WE NFSDF  + DA +  +I FL  NGLDL+K++++GI
Subjt:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGI

Query:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN
         I  F  +   +L+K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    RLGLE L     L R G  H+
Subjt:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN

Query:  AGSDSLLTASAHFEMVERF
        AGS++ LTA    +++  F
Subjt:  AGSDSLLTASAHFEMVERF

Q9SFX6 Putative CCR4-associated factor 1 homolog 31.4e-3740.18Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G    +WE N SDFD      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+L K++++GI I  F + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    + GL+R
Subjt:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTA
        +  +L +KR G  H+AGSDS LTA
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTA

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.1e-4741.02Show/hide
Query:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA
        +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV  TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +
Subjt:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA

Query:  IPFLEHNGLDLKKMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR
        I FL  +GLDL+K++ +G+ +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G V D K MA FCEGL +H  
Subjt:  IPFLEHNGLDLKKMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR

Query:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSET
        LGL +L +LL + R G  H+AGSDSL+TA   F  ++    +S+   G +YG  ++
Subjt:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSET

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.9e-4941.02Show/hide
Query:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA
        +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV  TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +
Subjt:  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYA

Query:  IPFLEHNGLDLKKMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR
        I FL  +GLDL+K++ +G+ +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G V D K MA FCEGL +H  
Subjt:  IPFLEHNGLDLKKMKKDGIPI--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR

Query:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSET
        LGL +L +LL + R G  H+AGSDSL+TA   F  ++    +S+   G +YG  ++
Subjt:  LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSET

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-3940.18Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G    +WE N SDFD      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+L K++++GI I  F + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    + GL+R
Subjt:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTA
        +  +L +KR G  H+AGSDS LTA
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTA

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.3e-3940.62Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LIQLG T  D  G I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
         NGL+L K+ ++GI I  F + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A+ C GL    R GL+R
Subjt:  HNGLDLKKMKKDGIPIASFTKKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTA
        +  +L +KR G  H+AGSDS LTA
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTA

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.3e-3939.83Show/hide
Query:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE
        +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LIQLG+T       I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLE

Query:  HNGLDLKKMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER
        +NGLDL K++++GI I  F  +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+K MA  C GL    R GL+R
Subjt:  HNGLDLKKMKKDGIPIASFTKKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDLKHMAKFCEGLDDHGRLGLER

Query:  LGKLLNLKRFGMKHNAGSDSLLTASAHFEMV
        +  +L ++R G  H+AGSDS LTA    +++
Subjt:  LGKLLNLKRFGMKHNAGSDSLLTASAHFEMV

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.9e-4444.29Show/hide
Query:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGI
        ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IGG+WE NFSDF  + DA +  +I FL  NGLDL+K++++GI
Subjt:  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGI

Query:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN
         I  F  +   +L+K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    RLGLE L     L R G  H+
Subjt:  PIASFTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHN

Query:  AGSDSLLTASAHFEMVERF
        AGS++ LTA    +++  F
Subjt:  AGSDSLLTASAHFEMVERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAAGAAATCAAACCCGATCAACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATT
CCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAA
CTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGATTTTGACTTCGAAGCTGACGCTCATTCTCCA
TATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTAAAAAAAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTTCTACCTATCCTTCGAAAACG
TGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGG
TGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTG
AATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATTTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAA
TGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGTCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATT
TTGTTTTCTATGTGTCCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAAGAAATCAAACCCGATCAACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATT
CCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAA
CTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGATTTTGACTTCGAAGCTGACGCTCATTCTCCA
TATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTAAAAAAAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTTCTACCTATCCTTCGAAAACG
TGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGG
TGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTG
AATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATTTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAA
TGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGTCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATT
TTGTTTTCTATGTGTCCACTTAA
Protein sequenceShow/hide protein sequence
MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSP
YAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLL
NLKRFGMKHNAGSDSLLTASAHFEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYVST