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CSPI02G13490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G13490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionShikimate dehydrogenase
Genome locationChr2:13486467..13487215
RNA-Seq ExpressionCSPI02G13490
SyntenyCSPI02G13490
Gene Ontology termsGO:0016053 - organic acid biosynthetic process (biological process)
GO:0019752 - carboxylic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045904.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase [Cucumis melo var. makuwa]1.2e-0449.21Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY
        IPHKEAA        F  E++    +IG    + RRHDGK+C  NTDYV  +SAIE+KLQ  Y
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY

KGN61927.1 hypothetical protein Csa_006589 [Cucumis sativus]3.7e-4679.39Show/hide
Query:  MEEESGRYLREGNRRSEGKTERVGLRSDEPSRRVAVPHVAAFTIIPHKEAAPNYLCFIGFAGEIEVWLVNIGVARRHDGKFCRSNTDYVLPMSAIEKKLQ
        MEEESGRYLREGNRRSEGKTERVGLRSDEPSRRVAVP VAAFTIIPHKEAAPNYL  +            + + +   G FCRSNTDYVLP+SAIEKKLQ
Subjt:  MEEESGRYLREGNRRSEGKTERVGLRSDEPSRRVAVPHVAAFTIIPHKEAAPNYLCFIGFAGEIEVWLVNIGVARRHDGKFCRSNTDYVLPMSAIEKKLQ

Query:  ALYVYFASPFFSSFMYTTDFSPSFDKFFFLQ
        ALYVYFASPFFSSFMYTTDFSPSFDKFF LQ
Subjt:  ALYVYFASPFFSSFMYTTDFSPSFDKFFFLQ

TYK13685.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase [Cucumis melo var. makuwa]1.2e-0449.21Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY
        IPHKEAA        F  E++    +IG    + RRHDGK+C  NTDYV  +SAIE+KLQ  Y
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY

XP_008457914.1 PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Cucumis melo]1.2e-0449.21Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY
        IPHKEAA        F  E++    +IG    + RRHDGK+C  NTDYV  +SAIE+KLQ  Y
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY

XP_011649384.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [Cucumis sativus]2.1e-0446.05Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALYVYFASPFFSSFMY
        IPHKEAA        F  E++    +IG    + RRHDGKFC  NTDYV  +SAIE+KLQ  Y    SP   S ++
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALYVYFASPFFSSFMY

TrEMBL top hitse value%identityAlignment
A0A0A0LMC4 Uncharacterized protein1.8e-4679.39Show/hide
Query:  MEEESGRYLREGNRRSEGKTERVGLRSDEPSRRVAVPHVAAFTIIPHKEAAPNYLCFIGFAGEIEVWLVNIGVARRHDGKFCRSNTDYVLPMSAIEKKLQ
        MEEESGRYLREGNRRSEGKTERVGLRSDEPSRRVAVP VAAFTIIPHKEAAPNYL  +            + + +   G FCRSNTDYVLP+SAIEKKLQ
Subjt:  MEEESGRYLREGNRRSEGKTERVGLRSDEPSRRVAVPHVAAFTIIPHKEAAPNYLCFIGFAGEIEVWLVNIGVARRHDGKFCRSNTDYVLPMSAIEKKLQ

Query:  ALYVYFASPFFSSFMYTTDFSPSFDKFFFLQ
        ALYVYFASPFFSSFMYTTDFSPSFDKFF LQ
Subjt:  ALYVYFASPFFSSFMYTTDFSPSFDKFFFLQ

A0A0A0LQ48 Shikimate dehydrogenase1.0e-0446.05Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALYVYFASPFFSSFMY
        IPHKEAA        F  E++    +IG    + RRHDGKFC  NTDYV  +SAIE+KLQ  Y    SP   S ++
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALYVYFASPFFSSFMY

A0A1S3C6S2 Shikimate dehydrogenase5.9e-0549.21Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY
        IPHKEAA        F  E++    +IG    + RRHDGK+C  NTDYV  +SAIE+KLQ  Y
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY

A0A5A7TS71 Shikimate dehydrogenase5.9e-0549.21Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY
        IPHKEAA        F  E++    +IG    + RRHDGK+C  NTDYV  +SAIE+KLQ  Y
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY

A0A5D3CQ69 Shikimate dehydrogenase5.9e-0549.21Show/hide
Query:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY
        IPHKEAA        F  E++    +IG    + RRHDGK+C  NTDYV  +SAIE+KLQ  Y
Subjt:  IPHKEAAPNYLCFIGFAGEIEVWLVNIG----VARRHDGKFCRSNTDYVLPMSAIEKKLQALY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAGAGTGGAAGATATTTAAGAGAGGGAAATCGTAGGAGCGAAGGAAAAACAGAGCGTGTCGGTTTGCGTTCAGATGAGCCGAGTAGGCGCGTGGCAGTCCC
TCATGTTGCCGCCTTTACTATTATTCCCCATAAAGAGGCTGCACCAAATTATCTTTGCTTCATTGGTTTTGCTGGAGAAATCGAAGTTTGGCTGGTCAATATAGGTGTTG
CAAGAAGACATGATGGGAAGTTTTGCCGTTCTAACACGGATTATGTCCTGCCCATGTCCGCTATTGAGAAAAAACTACAAGCTCTGTATGTATACTTTGCTTCACCATTC
TTCTCAAGTTTCATGTACACTACTGATTTTTCTCCATCTTTTGATAAATTCTTCTTTTTACAGCTAACTCACTGGCAGTCCTCTAACGATAGAAGGAAGTTCACAATCTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAGAGTGGAAGATATTTAAGAGAGGGAAATCGTAGGAGCGAAGGAAAAACAGAGCGTGTCGGTTTGCGTTCAGATGAGCCGAGTAGGCGCGTGGCAGTCCC
TCATGTTGCCGCCTTTACTATTATTCCCCATAAAGAGGCTGCACCAAATTATCTTTGCTTCATTGGTTTTGCTGGAGAAATCGAAGTTTGGCTGGTCAATATAGGTGTTG
CAAGAAGACATGATGGGAAGTTTTGCCGTTCTAACACGGATTATGTCCTGCCCATGTCCGCTATTGAGAAAAAACTACAAGCTCTGTATGTATACTTTGCTTCACCATTC
TTCTCAAGTTTCATGTACACTACTGATTTTTCTCCATCTTTTGATAAATTCTTCTTTTTACAGCTAACTCACTGGCAGTCCTCTAACGATAGAAGGAAGTTCACAATCTA
A
Protein sequenceShow/hide protein sequence
MEEESGRYLREGNRRSEGKTERVGLRSDEPSRRVAVPHVAAFTIIPHKEAAPNYLCFIGFAGEIEVWLVNIGVARRHDGKFCRSNTDYVLPMSAIEKKLQALYVYFASPF
FSSFMYTTDFSPSFDKFFFLQLTHWQSSNDRRKFTI