; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G14220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G14220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L26
Genome locationChr2:14043182..14044014
RNA-Seq ExpressionCSPI02G14220
SyntenyCSPI02G14220
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148028.1 60S ribosomal protein L26-1 [Cucumis sativus]2.6e-71100Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]1.3e-7099.32Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]1.8e-6996.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSA LSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]7.0e-6996.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRK+RKAHFSAPSSVRR+LMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]5.4e-6995.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A0A0LJI3 KOW domain-containing protein1.2e-71100Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A1S3C7Q4 60S ribosomal protein L26-1-like6.2e-7199.32Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A5A7TS06 60S ribosomal protein L26-1-like6.2e-7199.32Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1D6T1 60S ribosomal protein L26-1-like8.9e-7096.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSA LSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1L4P7 60S ribosomal protein L26-1-like2.6e-6995.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P12749 60S ribosomal protein L261.1e-4366.9Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R KNRK HF+APS +RR +MS+ LS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

P51414 60S ribosomal protein L26-18.3e-6584.25Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRKNRKAHF+A SS RR++MS+ LS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L262.4e-4366.9Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R KNRK HF+APS +RR +MS+ LS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

Q39411 60S ribosomal protein L262.3e-5978.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRR+NRK HF+A SS RR+ MS+ LS DLR KYNVRSMPIRKDDE Q++RGTYKGREGK+ QVYRRK +IHIER+TREKVNG+TVNVG++P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV
        +KV+ITKL+LDKDRKSLL+RKAKGRA+ADKDKGTKFTA D+MQ+V
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-22.1e-6382.88Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRKNRKAHF+APSSVRR+LMS+ LS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein5.9e-6684.25Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRKNRKAHF+A SS RR++MS+ LS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein1.5e-6482.88Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRKNRKAHF+APSSVRR+LMS+ LS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGCAAGGCACACTTCTCCGCGCCGTCCAGCGTACGGCGGATTTTGATGAGTGCGACCCTCTCCGGCGA
CCTTCGTTCTAAGTACAATGTCCGCTCCATGCCGATCCGGAAGGACGACGAAGTTCAGGTCTTGAGAGGAACGTACAAAGGCCGTGAAGGTAAGGTCGTACAGGTCTACC
GTCGCAAGTGGATCATTCATATTGAGCGCATCACTAGAGAGAAAGTGAATGGCTCCACTGTTAATGTTGGAATTAAGCCGTCGAAGGTTATGATTACGAAGCTCAAGTTG
GATAAGGATAGGAAGTCGTTGCTTGATCGTAAGGCTAAGGGTCGTGCTTCTGCAGATAAGGATAAGGGTACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTA
A
mRNA sequenceShow/hide mRNA sequence
AAACGAACCTTTAAAATTAGGTTTTCTTCCTCTTTGCCTTTGGTTAACTTCAATTTCCCTCAGAGACCCAAAAACCCTAATCAATCACAATGAAGTACAACCCTAGAGTC
TCCAGCTCCCGCCGTAAGAATCGCAAGGCACACTTCTCCGCGCCGTCCAGCGTACGGCGGATTTTGATGAGTGCGACCCTCTCCGGCGACCTTCGTTCTAAGTACAATGT
CCGCTCCATGCCGATCCGGAAGGACGACGAAGTTCAGGTCTTGAGAGGAACGTACAAAGGCCGTGAAGGTAAGGTCGTACAGGTCTACCGTCGCAAGTGGATCATTCATA
TTGAGCGCATCACTAGAGAGAAAGTGAATGGCTCCACTGTTAATGTTGGAATTAAGCCGTCGAAGGTTATGATTACGAAGCTCAAGTTGGATAAGGATAGGAAGTCGTTG
CTTGATCGTAAGGCTAAGGGTCGTGCTTCTGCAGATAAGGATAAGGGTACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTAATTTTAATCTGGTGAAAATTT
TTGAAATTTCCTCTTAGTTTTAGTTCTTACCCTGTTTTTATTTGCTTTCAAACTTGAGGTTTTGTCTTTGTTTGTTCTGGAATGAGGAGACAATGTTTTATTGTTTTTTT
AATTTTGATGCTTCGAGTTCTGCCTTTGCTCTCAATACCTGGATTTTTTTGTTATTTTTCAATGCAATATCATAAGATTCCTTTCTTCATATCTCTGTTCTTGTCCTTTG
AATGAAGAATTGATCTTGATTTAGTTTCTGGTCGACAGGCATTGTTGTTGATTGACATAAAGC
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVMITKLKL
DKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD