; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G14520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G14520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr2:14312675..14313442
RNA-Seq ExpressionCSPI02G14520
SyntenyCSPI02G14520
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]1.4e-50100Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR

Query:  KG
        KG
Subjt:  KG

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2057.14Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK
        MDDKS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK  NK+E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK

Query:  KSRKG
        ++RKG
Subjt:  KSRKG

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-2056.19Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK  NK+E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK

Query:  KSRKG
        ++RKG
Subjt:  KSRKG

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]7.5e-2056.19Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK  NK+EREA E E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK

Query:  KSRKG
        ++RKG
Subjt:  KSRKG

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]3.4e-2057.14Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK
        MDDKS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK  NK+E+EAME E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK

Query:  KSRKG
        ++RKG
Subjt:  KSRKG

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein6.8e-51100Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSR

Query:  KG
        KG
Subjt:  KG

A0A6J1D739 uncharacterized protein LOC1110179595.4e-1653.64Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSK-THKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGI---LGEN----
        MDDKSLPYNLRLR   K+S+PTE SK   KH+RDFQEK  ++      + ++ RCEKCGC F IE SL SHHCK KN+     +E   +   L +N    
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSK-THKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGI---LGEN----

Query:  KSFRKKSRKG
        KSFRK+SRKG
Subjt:  KSFRKKSRKG

A0A6J1EMR9 uncharacterized protein LOC1114349503.6e-2056.19Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK
        MD+KS+PYNLRLRKDHK+S+ TE SK  K  +R+FQEK  ++ + +      Y C+KCGCSFD++ SL SHHCK  NK+EREA E E    LG++KS RK
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKH-DRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHGILGENKSFRK

Query:  KSRKG
        ++RKG
Subjt:  KSRKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGAAAA
GGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTAAAA
ATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTGGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGTTTTGCATAGGAGAC
mRNA sequenceShow/hide mRNA sequence
ATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGAAAA
GGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTAAAA
ATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTGGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGTTTTGCATAGGAGAC
Protein sequenceShow/hide protein sequence
MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSRKGFCIGD