; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G14920 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G14920
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionupstream activation factor subunit UAF30-like
Genome locationChr2:14574443..14583204
RNA-Seq ExpressionCSPI02G14920
SyntenyCSPI02G14920
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148436.1 upstream activation factor subunit UAF30 [Cucumis sativus]5.8e-178100Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

XP_008457882.1 PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]9.0e-17196.39Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSS+K KKRGGGF+KLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

XP_022928098.1 upstream activation factor subunit UAF30-like [Cucurbita moschata]3.1e-14784.91Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK Q     KEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

XP_023512445.1 upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo]2.4e-14784.91Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK Q     KEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]1.5e-15488.39Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVD+FLQTEHE+AV+EG   CEEV QE GDENLK E +DGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKV-----KKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  S K+     K+ GGGF+KLCSLSPQLQEFIGAPEMARTEVVKQLWNHIR  NLQDPSNRRNILCD+ LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKTSSEKV-----KKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD
        ESNDVIPA SSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD
Subjt:  ESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD

Query:  KRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        KRRIICDERLKELFDVDSF+GFTVSKLLATHFIK K
Subjt:  KRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

TrEMBL top hitse value%identityAlignment
A0A0A0LJW7 Uncharacterized protein2.8e-178100Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

A0A1S3C766 upstream activation factor subunit UAF30-like4.4e-17196.39Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSS+K KKRGGGF+KLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
        IPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Subjt:  CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

A0A5D3CU37 Upstream activation factor subunit UAF30-like2.2e-14695.55Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+ED
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        DEKGKTSS+K KKRGGGF+KLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQD
        IPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ+
Subjt:  IPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQD

A0A6J1EMX5 upstream activation factor subunit UAF30-like1.5e-14784.91Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK Q     KEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

A0A6J1I6I7 upstream activation factor subunit spp27-like4.1e-14584.02Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND  D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN
         EKGK  S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTSSEKVKKR--GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEK Q     KEKQPKEK QKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE++L RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK
        SDKRR+ICDE+LKELFDVDSF+GFTVSKLLATHF+K K
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp273.4e-1128.51Show/hide
Query:  LRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDG--DSEDGDNDNEDDEKGKTSS
        ++  L   D  T +   VR+ LEE   +DLS  K  +   +          + +E         +  G    +  TE+G   ++      ED E+G    
Subjt:  LRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDG--DSEDGDNDNEDDEKGKTSS

Query:  EKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQK
                   K   LSP+L EF+G  +++R + VK+LW +I+ ++LQDP+++R ILCD+ LK++F V++++MF MNK L+  +  +  +D +P    + 
Subjt:  EKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQK

Query:  EKP--------QKEKQPKEKP
        E+P        Q+EK+  E P
Subjt:  EKP--------QKEKQPKEKP

Q05024 Protein TRI18.9e-1229.8Show/hide
Query:  VRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEG---YAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--------GG
        VR+ L+  + ++L  ++  I E     L  E    +QE         ++   D + +L+++ E    E+    +    KGK+ S+  +K+          
Subjt:  VRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEG---YAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--------GG

Query:  GFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKE
           +   LS  LQ+F+G+ E+ RT+VVK +W +I+E++LQ+P +RR ILCDE ++ +FG   + MF MNK L+KH++    ++++  +  QK+ P+KE
Subjt:  GFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKE

Q08747 Upstream activation factor subunit UAF301.0e-1233.66Show/hide
Query:  LRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSE--DGDNDNEDDEKGKTSSEKVK
        L + DL T TT  VR  L+E + ID+  +   I + +   L    E+   E     E++ +E+    +++  E   S+   G+  N+ + KG T  EK K
Subjt:  LRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSE--DGDNDNEDDEKGKTSSEKVK

Query:  ---KRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIP--AKSS
            +    T+  +LS  L   +G  E+ RTEVV++LW +I+ +NLQ+P+N++ ILCDE L+ + G  S NMF+M+K L+ H+  P + +D  P   +  
Subjt:  ---KRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIP--AKSS

Query:  QKEKP
        +KEKP
Subjt:  QKEKP

Q9SD34 Zinc finger CCCH domain-containing protein 441.4e-0428.03Show/hide
Query:  KEEDSDDSAREDKRQKKGKSGFLAPLPLSNA--------LVAFLGTGE-DALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVS
        +   SD     +K   K  S  L   P   +         V+F+  G+   L + DV   + DYIK+ NL+DP  K +++CD+ L +LF       F + 
Subjt:  KEEDSDDSAREDKRQKKGKSGFLAPLPLSNA--------LVAFLGTGE-DALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVS

Query:  KLLATHFIKMKQCLPVQNYVSKHLEGQSMHAV
        KLL +H +     +  +   +K   G++ HAV
Subjt:  KLLATHFIKMKQCLPVQNYVSKHLEGQSMHAV

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein1.8e-6847.13Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSDS+L+++LR+ LR+SDL TTT A VRR+LE  FG++L+DKK F+REQ+D FL+++   A+ E      +  QE+ D N       GD  D +    D
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        D+K +    K KKRGGGF K+C LSPQL++F+G  ++ARTEVVK++W +IRE++LQDP+NRRNILCDE L +LF V +INMFQMNKAL+KHIW L   D 
Subjt:  DEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  I-------PAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKS---------GFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDY
                    +  E+ +K+ + +E  +   ++  +EED     R+ K++K  KS         GF     LS  L AF GT +  L R++VVK +W Y
Subjt:  I-------PAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKS---------GFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDY

Query:  IKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        IK+NNLQDPSDKR IICDE L+ LF V+S N F ++K LA H   + Q
Subjt:  IKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.0e-1441.38Show/hide
Query:  TSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH
        ++  K  ++G G  K+  +S  L  FIG  E++RT  VK++W +I+ NNLQ+P N+R ILCDE LK +F G +++   +++K LS+H
Subjt:  TSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH

AT3G03590.1 SWIB/MDM2 domain superfamily protein4.8e-1342.24Show/hide
Query:  KQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSF
        K+P  KP+ K + + K + SD  A++  R     +G     P+S  L  FLGTGE +  R+D +K +W YIK ++LQ+P+DKR I CDE LK +F+    
Subjt:  KQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSF

Query:  NGF-TVSKLLATHFIK
         GF  +SKLL+ HF+K
Subjt:  NGF-TVSKLLATHFIK

AT3G19080.1 SWIB complex BAF60b domain-containing protein6.2e-6938.71Show/hide
Query:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED
        MVSD +L++RLR+ L +SDLNT T A VRR+LE DFG+DL+DKK +IR+Q+D FL++       E      +V +    + +K E E GD ED D D   
Subjt:  MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNED

Query:  DEKGKTSSE-KVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL----
         E+ K     K KKRGGG TK+  LSPQL++ +GA ++ RTEVVK++W +IRE +LQDP +RR I+CDE L +LF V +INMFQMNKAL+KHIWPL    
Subjt:  DEKGKTSSE-KVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL----

Query:  ---------------------------------ESNDVIPAKSSQKEKPQKEKQPKEKPQK---------------------------------------
                                         E ++    +S +K K +K  +  EKP++                                       
Subjt:  ---------------------------------ESNDVIPAKSSQKEKPQKEKQPKEKPQK---------------------------------------

Query:  ------------------------------------------------------KRQKQGKE--EDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGT
                                                              K  K GK+  E   DS   +++ KK K   LAPLPLS+ALV FLG 
Subjt:  ------------------------------------------------------KRQKQGKE--EDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGT

Query:  GEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
        GE++L R+DVVKR+W+YI  N+LQDPSDKRR+ICDE+LKELF+VDSF   +VSKLL  HFIK +Q
Subjt:  GEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

AT4G22360.1 SWIB complex BAF60b domain-containing protein1.2e-3534.05Show/hide
Query:  NEDDEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLES
        N+  ++   +  K K   GG  K+C +SP+L+  +G P + RTE+V+QLW +IR+NNLQDPSN+R I+CD+ L+ +F  +  +MF+MNK L+KHI PL+ 
Subjt:  NEDDEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLES

Query:  NDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKR
            P+K S                     Q K+  ++   + +  +    +   + + LS  L  F GTGE  +   ++++R+W+YIK NNL+DP +  
Subjt:  NDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKR

Query:  RIICDERLKELFDVDSFNGFTVSKLLATHFIK
         I CDE+L++L   +S +   ++++L  H  K
Subjt:  RIICDERLKELFDVDSFNGFTVSKLLATHFIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCGACTCGGAGCTCATCAGCCGGCTCCGAGACTTTCTTCGCAATTCCGACCTCAATACCACTACTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTCGG
CATTGATTTGTCTGATAAGAAGCTGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAACATGAGAAAGCCGTTCAAGAAGGTTATGCCCATTGCGAGGAAGTCC
ACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGAGGATGGAGATAGTGAAGACGGAGATAACGACAACGAAGACGACGAAAAGGGTAAAACTAGCTCTGAAAAG
GTGAAGAAAAGAGGGGGTGGTTTTACTAAGTTATGTAGCCTTTCCCCACAACTGCAGGAATTTATTGGAGCACCCGAAATGGCAAGGACTGAGGTTGTTAAACAACTATG
GAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTGGTGTCAATTCCATCAACATGTTTCAAA
TGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGATGTTATTCCAGCCAAATCTAGTCAGAAAGAAAAGCCACAAAAGGAGAAGCAGCCAAAGGAGAAG
CCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAGATTCAGATGACTCTGCAAGAGAGGATAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCCACT
TTCGAATGCTCTGGTGGCATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGACGTAGTGAAAAGAATGTGGGATTACATTAAGCAAAATAACCTTCAGGACCCTT
CTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAAAGAACTCTTTGATGTCGATTCCTTTAATGGGTTCACTGTTTCGAAACTCCTGGCCACGCATTTTATAAAGATG
AAACAGTGTTTACCAGTGCAAAATTATGTTTCTAAACACTTGGAAGGTCAATCCATGCATGCCGTTCTTTACTAA
mRNA sequenceShow/hide mRNA sequence
AATTTCATTACATTTAATTTCTTTTTTAATTTCTTGATTTTTTCTTTTCCAAATAGATAATTAATTTAATTTTCCAAAAAATGTTCTTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCCCCAATCTCCCATCTGTTCTTCACGCAAAGCTTTTCTTTATTCAAAGCCAAAGCCACACGCCACCAACACTCTACCCTCACCTCCAATTCCTAC
CCAATCTTCCTCGTTTTTCCCTTCTTCCCTTTCAAATATTGGATTACCCAGCAATGGTTTCCGACTCGGAGCTCATCAGCCGGCTCCGAGACTTTCTTCGCAATTCCGAC
CTCAATACCACTACTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTCGGCATTGATTTGTCTGATAAGAAGCTGTTTATTAGGGAACAGGTCGACTTGTTCCTCCA
GACTGAACATGAGAAAGCCGTTCAAGAAGGTTATGCCCATTGCGAGGAAGTCCACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGAGGATGGAGATAGTGAAG
ACGGAGATAACGACAACGAAGACGACGAAAAGGGTAAAACTAGCTCTGAAAAGGTGAAGAAAAGAGGGGGTGGTTTTACTAAGTTATGTAGCCTTTCCCCACAACTGCAG
GAATTTATTGGAGCACCCGAAATGGCAAGGACTGAGGTTGTTAAACAACTATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTG
TGATGAACCGTTAAAAGCACTCTTTGGTGTCAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGATGTTATTCCAG
CCAAATCTAGTCAGAAAGAAAAGCCACAAAAGGAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAGATTCAGATGACTCTGCAAGA
GAGGATAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCCACTTTCGAATGCTCTGGTGGCATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGA
CGTAGTGAAAAGAATGTGGGATTACATTAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAAAGAACTCTTTGATGTCGATT
CCTTTAATGGGTTCACTGTTTCGAAACTCCTGGCCACGCATTTTATAAAGATGAAACAGTGTTTACCAGTGCAAAATTATGTTTCTAAACACTTGGAAGGTCAATCCATG
CATGCCGTTCTTTACTAATTATACTATGAAGGAAATAATGATGGGAGGTTGAAGCAATATAGTCGGTAATTTGACGTAGGCGGATCGTACTATACATTTTTATATTTTAT
TTTTGGATTATCTTTTTATAACTTTTTTTAGACAATTGTGAGG
Protein sequenceShow/hide protein sequence
MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEK
VKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEK
PQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKM
KQCLPVQNYVSKHLEGQSMHAVLY