; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G16410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G16410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpeptidyl-prolyl cis-trans isomerase G isoform X2
Genome locationChr2:15809299..15812586
RNA-Seq ExpressionCSPI02G16410
SyntenyCSPI02G16410
Gene Ontology termsGO:0016575 - histone deacetylation (biological process)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063090.1 peptidyl-prolyl cis-trans isomerase G isoform X2 [Cucumis melo var. makuwa]3.1e-8198.67Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

XP_008460840.1 PREDICTED: uncharacterized protein LOC103499596 isoform X1 [Cucumis melo]3.1e-8198.67Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

XP_008460844.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G isoform X2 [Cucumis melo]3.1e-8198.67Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

XP_011649442.1 zinc finger CCCH domain-containing protein 13 [Cucumis sativus]3.6e-82100Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

XP_038900584.1 zinc finger CCCH domain-containing protein 13 [Benincasa hispida]6.4e-7996Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHE EA+KSQNHF++CPNGERTDNDNTLIDVFRW RCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEY LARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

TrEMBL top hitse value%identityAlignment
A0A0A0LJZ2 Uncharacterized protein1.8e-82100Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

A0A1S3CCW4 peptidyl-prolyl cis-trans isomerase G isoform X21.5e-8198.67Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

A0A1S3CDT5 uncharacterized protein LOC103499596 isoform X11.5e-8198.67Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

A0A5A7V768 Peptidyl-prolyl cis-trans isomerase G isoform X21.5e-8198.67Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

A0A6J1G6W1 uncharacterized protein LOC1114514155.8e-7894Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV
        IKYSISIVADKGLKKPLYTSARLKKGEVLYLETH+CRYELCFSGEKMVKTI +SQGHE +AEKSQNHF++CPNGERTDNDNTLIDVFRWSRCK PLPQKV
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKV

Query:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEY LARVHFLSMN
Subjt:  MRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G08450.1 CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink).1.5e-6576.58Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQ---GHE-----TEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRC
        IKYSISIVADKGLKKPL+TSARLKKGEVLYLETHSCRYELCF+GEK +K I +SQ    HE         KSQNH     NG++TD+DN+LIDVFRWSRC
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQ---GHE-----TEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRC

Query:  KKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        KKPLPQK+MRSIG PLP++H+EVLE+NLDWEDVQWSQTGVWIAGKEY LARVHFLS N
Subjt:  KKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

AT5G08450.2 CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.5e-6576.58Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQ---GHE-----TEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRC
        IKYSISIVADKGLKKPL+TSARLKKGEVLYLETHSCRYELCF+GEK +K I +SQ    HE         KSQNH     NG++TD+DN+LIDVFRWSRC
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQ---GHE-----TEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRC

Query:  KKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        KKPLPQK+MRSIG PLP++H+EVLE+NLDWEDVQWSQTGVWIAGKEY LARVHFLS N
Subjt:  KKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN

AT5G08450.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink).1.5e-6576.58Show/hide
Query:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQ---GHE-----TEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRC
        IKYSISIVADKGLKKPL+TSARLKKGEVLYLETHSCRYELCF+GEK +K I +SQ    HE         KSQNH     NG++TD+DN+LIDVFRWSRC
Subjt:  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQ---GHE-----TEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRC

Query:  KKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN
        KKPLPQK+MRSIG PLP++H+EVLE+NLDWEDVQWSQTGVWIAGKEY LARVHFLS N
Subjt:  KKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTATTAAATGTTCCATTTACAATAATCTCCAGGATTAAATACAGTATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCCCCTCTACACATCTGCACGGTTGAA
GAAGGGAGAAGTTTTATATCTAGAAACACATTCGTGCAGGTATGAACTCTGCTTTTCCGGAGAGAAGATGGTGAAAACCATAGCATCATCTCAAGGGCATGAAACTGAAG
CCGAGAAATCTCAGAATCACTTTCTAAACTGCCCAAATGGTGAAAGAACTGATAACGATAATACTTTGATTGATGTGTTTCGATGGTCTCGCTGTAAGAAGCCATTGCCT
CAGAAGGTTATGCGTTCTATTGGTATCCCACTGCCTTCTGAACACGTAGAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACAGTGGTCACAGACTGGCGTTTGGAT
AGCTGGGAAAGAATATCAACTTGCTCGTGTGCATTTCTTATCCATGAATTAG
mRNA sequenceShow/hide mRNA sequence
AGATTTACCCTATATAGTTTCACAATGTTTGTATTAAATGTTCCATTTACAATAATCTCCAGGATTAAATACAGTATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCC
CCTCTACACATCTGCACGGTTGAAGAAGGGAGAAGTTTTATATCTAGAAACACATTCGTGCAGGTATGAACTCTGCTTTTCCGGAGAGAAGATGGTGAAAACCATAGCAT
CATCTCAAGGGCATGAAACTGAAGCCGAGAAATCTCAGAATCACTTTCTAAACTGCCCAAATGGTGAAAGAACTGATAACGATAATACTTTGATTGATGTGTTTCGATGG
TCTCGCTGTAAGAAGCCATTGCCTCAGAAGGTTATGCGTTCTATTGGTATCCCACTGCCTTCTGAACACGTAGAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACA
GTGGTCACAGACTGGCGTTTGGATAGCTGGGAAAGAATATCAACTTGCTCGTGTGCATTTCTTATCCATGAATTAGTTCCATTTCTATGTTTTATCTTGTAACTTTTAGA
TGTATGAGAATATGTATTTCATAATCATATTTCAGAGTAAGAAGAGATGATATTACAATAGTGTGCAAATTTTTATTAGTTGATAAAATTGGATGTGGAAACTTGATTCT
TTGATCCTGCATCTCATCATGCTATATTTACTAAATCATACTTATATAAAATAAAATAGTGTTTA
Protein sequenceShow/hide protein sequence
MFVLNVPFTIISRIKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLP
QKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN