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CSPI02G16500 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G16500
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontrafficking protein particle complex subunit 2
Genome locationChr2:15889332..15894575
RNA-Seq ExpressionCSPI02G16500
SyntenyCSPI02G16500
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR006722 - Trafficking protein particle complex subunit 2
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147330.1 transport protein particle 20 kDa subunit [Cucumis sativus]3.8e-69100Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

XP_008460820.1 PREDICTED: trafficking protein particle complex subunit 2 isoform X2 [Cucumis melo]1.9e-6898.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

XP_022157725.1 transport protein particle 20 kDa subunit [Momordica charantia]5.5e-6897.78Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRN+IPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

XP_022947789.1 transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata]1.4e-6898.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

XP_038900562.1 transport protein particle 20 kDa subunit [Benincasa hispida]5.0e-6999.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

TrEMBL top hitse value%identityAlignment
A0A1S3CCU2 trafficking protein particle complex subunit 2 isoform X29.1e-6998.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

A0A1S4E319 trafficking protein particle complex subunit 2 isoform X12.3e-6797.79Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG-HTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG-HTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

A0A6J1DTW9 transport protein particle 20 kDa subunit2.7e-6897.78Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRN+IPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

A0A6J1G7X4 transport protein particle 20 kDa subunit isoform X27.0e-6998.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

A0A6J1I1U1 transport protein particle 20 kDa subunit isoform X27.0e-6998.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

SwissProt top hitse value%identityAlignment
E2QV03 Trafficking protein particle complex subunit 21.1e-3146.38Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

F1SRI0 Trafficking protein particle complex subunit 21.1e-3146.38Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

P0DI81 Trafficking protein particle complex subunit 21.5e-3146.38Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

P0DI82 Trafficking protein particle complex subunit 2B1.5e-3146.38Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

Q3T0F2 Trafficking protein particle complex subunit 21.1e-3146.38Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S + SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL

Arabidopsis top hitse value%identityAlignment
AT1G80500.1 SNARE-like superfamily protein2.0e-6891.11Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+VDRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL
        ELYIK +LNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRVTSSHFDTKVRALARKYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAATAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTT
TATACTGCATGCGTCCCTCGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTATATGTAA
CCGCCGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGATGATGGAATTAAGAGCTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGACCATACTCAATCCC
CTCTACTTGCCTGGATCACGTGTCACGTCTTCACATTTTGACACAAAAGTTCGTGCACTCGCAAGGAAGTATCTCTAA
mRNA sequenceShow/hide mRNA sequence
CCCGCATCCAAGCCCAGCCCAGCCCGCCCCCTCCCTTTTAACTCTCTGTCGTCTCACTCCATCGGAGACCTTCCGAATTCAAATCAGAATGGCGACCACAGCTTGTTTCA
TCATCGTCAGTAGGAATAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATACTGCATGCGTCCCTCGAC
ATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTATATGTAACCGCCGGTCATACGCGATTGAT
GTTACTTCACGACTCTCGCAATGATGATGGAATTAAGAGCTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGACCATACTCAATCCCCTCTACTTGCCTGGATCACGTG
TCACGTCTTCACATTTTGACACAAAAGTTCGTGCACTCGCAAGGAAGTATCTCTAATGATCACCTTCATTGCAGACCAAATGTGCTTTCGTGACAATGCTTCAAAGTTCA
TAGCAGCCCTGAGTTTTCTTTTAACAGTACAACATTTTAATCTTTGCTATTTGTGGCCCTGACATCAATCAATTCAGTAGTTAAACGCCCCTCAATGTGTAATATTGACT
TTGGAATGGCTTGGTCGCGAGTTGGAATTGCATTTTACAGTAATGCGTTCGCTACTCCCTTTTTACTCATCTTTTATTGTAGGGAGTAATATCATTATTTGTTATATTCT
AGAAGGCAGTGGATATGGGATATTAAAGTTATGTAAAATATGCATTTTTTGAAAAGCTCAAGAGACCAGTCC
Protein sequenceShow/hide protein sequence
MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNP
LYLPGSRVTSSHFDTKVRALARKYL