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CSPI02G16560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G16560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationChr2:15923807..15932517
RNA-Seq ExpressionCSPI02G16560
SyntenyCSPI02G16560
Gene Ontology termsNA
InterPro domainsIPR022203 - Protein of unknown function DUF3727


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02037.1 uncharacterized protein E5676_scaffold680G00190 [Cucumis melo var. makuwa]4.5e-7099.27Show/hide
Query:  VSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD
        VSDDEVE+LLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD
Subjt:  VSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD

Query:  DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
Subjt:  DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

XP_011649451.1 uncharacterized protein LOC101207357 isoform X1 [Cucumis sativus]7.0e-7195.83Show/hide
Query:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
        N+    +VSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
Subjt:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL

Query:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
Subjt:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

XP_016902634.1 PREDICTED: uncharacterized protein LOC103499586 isoform X1 [Cucumis melo]1.6e-7095.14Show/hide
Query:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
        N+    +VSDDEVE+LLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
Subjt:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL

Query:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
Subjt:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

XP_022157759.1 uncharacterized protein LOC111024390 isoform X1 [Momordica charantia]8.5e-6992.36Show/hide
Query:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
        N+    +VSDDEVE++LPAAAYALAKIHMHLVHSGFCYTARG FCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVA KDKL
Subjt:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL

Query:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        GQLTIADDELLEDPAIISAID+ETEFNALVEEEAALLESVLGKE
Subjt:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

XP_038900636.1 uncharacterized protein LOC120087801 isoform X1 [Benincasa hispida]5.0e-6993.06Show/hide
Query:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
        NV    +VSDDEVE++LPAA+YALAKIHMHLVHSGFCYTARG FCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHM+GAHYMIYTPSDPLLFVAIKDKL
Subjt:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL

Query:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
Subjt:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

TrEMBL top hitse value%identityAlignment
A0A0A0LN63 Uncharacterized protein9.4e-98100Show/hide
Query:  MGQPGQSLILDKLFEEAWVNLVHSWLWGEDVYILNVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLP
        MGQPGQSLILDKLFEEAWVNLVHSWLWGEDVYILNVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLP
Subjt:  MGQPGQSLILDKLFEEAWVNLVHSWLWGEDVYILNVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLP

Query:  NEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        NEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
Subjt:  NEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

A0A1S4E324 uncharacterized protein LOC103499586 isoform X17.5e-7195.14Show/hide
Query:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
        N+    +VSDDEVE+LLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
Subjt:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL

Query:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
Subjt:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

A0A5D3BRJ8 Reverse transcriptase Ty1/copia-type domain-containing protein2.2e-7099.27Show/hide
Query:  VSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD
        VSDDEVE+LLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD
Subjt:  VSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD

Query:  DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
Subjt:  DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

A0A6J1DXG8 uncharacterized protein LOC111024390 isoform X14.1e-6992.36Show/hide
Query:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
        N+    +VSDDEVE++LPAAAYALAKIHMHLVHSGFCYTARG FCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVA KDKL
Subjt:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL

Query:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        GQLTIADDELLEDPAIISAID+ETEFNALVEEEAALLESVLGKE
Subjt:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

A0A6J1DZ59 uncharacterized protein LOC111024390 isoform X31.2e-6896.35Show/hide
Query:  VSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD
        VSDDEVE++LPAAAYALAKIHMHLVHSGFCYTARG FCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVA KDKLGQLTIAD
Subjt:  VSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKLGQLTIAD

Query:  DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE
        DELLEDPAIISAID+ETEFNALVEEEAALLESVLGKE
Subjt:  DELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33480.1 unknown protein7.2e-6682.52Show/hide
Query:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL
        N+    +VSD+EVESLLPAAAYALAKIHMHLVHSGFCYTARG FCY+ED++FDFRTDDGQDV+GLP EGVEITCFH+DG+HYM+YTPSDPLLFVA KD+ 
Subjt:  NVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFHMDGAHYMIYTPSDPLLFVAIKDKL

Query:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGK
        G L IADDELL+DPA+ISAIDEETEFNALVEEEAALLES+LG+
Subjt:  GQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAGCCTGGCCAATCGCTCATTCTTGATAAACTATTTGAAGAAGCCTGGGTGAATTTGGTTCATTCTTGGCTCTGGGGGGAGGATGTTTATATTCTGAACGTCAG
TTGTAAACCTTCTGTGAGTGATGATGAAGTCGAATCTCTTTTGCCTGCTGCTGCTTATGCTCTTGCCAAAATACACATGCATTTGGTCCACAGCGGATTTTGCTATACGG
CGAGGGGAGCATTTTGCTATTCAGAAGATGACATTTTTGATTTCCGCACAGATGATGGACAAGATGTAGATGGCTTGCCTAATGAGGGTGTAGAGATCACTTGCTTTCAT
ATGGATGGAGCACATTACATGATTTATACGCCATCTGATCCACTTCTTTTTGTTGCTATCAAGGACAAGCTTGGTCAACTAACAATTGCTGATGATGAGCTGTTGGAGGA
CCCAGCAATTATAAGTGCCATTGACGAAGAGACTGAATTTAATGCACTGGTGGAGGAGGAGGCTGCTCTTCTAGAATCAGTTTTAGGGAAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAGCCTGGCCAATCGCTCATTCTTGATAAACTATTTGAAGAAGCCTGGGTGAATTTGGTTCATTCTTGGCTCTGGGGGGAGGATGTTTATATTCTGAACGTCAG
TTGTAAACCTTCTGTGAGTGATGATGAAGTCGAATCTCTTTTGCCTGCTGCTGCTTATGCTCTTGCCAAAATACACATGCATTTGGTCCACAGCGGATTTTGCTATACGG
CGAGGGGAGCATTTTGCTATTCAGAAGATGACATTTTTGATTTCCGCACAGATGATGGACAAGATGTAGATGGCTTGCCTAATGAGGGTGTAGAGATCACTTGCTTTCAT
ATGGATGGAGCACATTACATGATTTATACGCCATCTGATCCACTTCTTTTTGTTGCTATCAAGGACAAGCTTGGTCAACTAACAATTGCTGATGATGAGCTGTTGGAGGA
CCCAGCAATTATAAGTGCCATTGACGAAGAGACTGAATTTAATGCACTGGTGGAGGAGGAGGCTGCTCTTCTAGAATCAGTTTTAGGGAAAGAATAGCCCAACACAAGCT
GCACAGCTTTAGTTTGGAGAACACTACACTAGGTAGAGCATTTTGTAATATATGTTAAATTGGGTTTAGAAGTGCATGTTCTTCCTTTACTTCGCCTCATTTGAGTTTCT
CGCTGTTGGGGGAAACACATCAGTTGTTGAGGACTCTATCTAATAAAAGCTCAGGGCTGCCATTTCATTTTCATATGAGGATAATTTATAACATTTTTCCTAAATCGTTA
AAGTCATTTCAACAAATGGTAAAGTAATAATACCCACTT
Protein sequenceShow/hide protein sequence
MGQPGQSLILDKLFEEAWVNLVHSWLWGEDVYILNVSCKPSVSDDEVESLLPAAAYALAKIHMHLVHSGFCYTARGAFCYSEDDIFDFRTDDGQDVDGLPNEGVEITCFH
MDGAHYMIYTPSDPLLFVAIKDKLGQLTIADDELLEDPAIISAIDEETEFNALVEEEAALLESVLGKE